RNA–Protein interactions for RNA: ENST00000429553.5

SH2D3C-206, Transcript of SH2 domain containing 3C, humanhuman

TSL 1 (best) BASIC

Gene SH2D3C, Length 2,794 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3C-206ENST00000429553 NEFHP12036 1026 aa16.68■□□□□ 0.26
SH2D3C-206ENST00000429553 ATP4AP20648 1035 aa16.68■□□□□ 0.26
SH2D3C-206ENST00000429553 ZC3H6P61129 1189 aaKnown RBP16.68■□□□□ 0.26
SH2D3C-206ENST00000429553 CWF19L1Q69YN2 538 aaKnown RBP16.68■□□□□ 0.26
SH2D3C-206ENST00000429553 TTYH3Q9C0H2 523 aa16.68■□□□□ 0.26
SH2D3C-206ENST00000429553 PIDD1Q9HB75 910 aa16.68■□□□□ 0.26
SH2D3C-206ENST00000429553 NFS1Q9Y697 457 aa16.68■□□□□ 0.26
SH2D3C-206ENST00000429553 A0A1B0GVG6 124 aa16.67■□□□□ 0.26
SH2D3C-206ENST00000429553 USO1O60763 962 aaKnown RBP16.67■□□□□ 0.26
SH2D3C-206ENST00000429553 HSPA9P38646 679 aaKnown RBP16.67■□□□□ 0.26
SH2D3C-206ENST00000429553 CTCFP49711 727 aaPredicted RBP16.67■□□□□ 0.26
SH2D3C-206ENST00000429553 MAGOHP61326 146 aaKnown RBP16.67■□□□□ 0.26
SH2D3C-206ENST00000429553 BRINP3Q76B58 766 aa16.67■□□□□ 0.26
SH2D3C-206ENST00000429553 P3H4Q92791 437 aa16.67■□□□□ 0.26
SH2D3C-206ENST00000429553 MAGOHBQ96A72 148 aaKnown RBP16.67■□□□□ 0.26
SH2D3C-206ENST00000429553 TSGA10Q9BZW7 698 aa16.67■□□□□ 0.26
SH2D3C-206ENST00000429553 DDX21Q9NR30 783 aaKnown RBP eCLIP16.67■□□□□ 0.26
SH2D3C-206ENST00000429553 GGT7Q9UJ14 662 aa16.67■□□□□ 0.26
SH2D3C-206ENST00000429553 SLC12A4Q9UP95 1085 aa16.67■□□□□ 0.26
SH2D3C-206ENST00000429553 A0A1W2PQC6 194 aa16.67■□□□□ 0.26
SH2D3C-206ENST00000429553 ATP5J2-PTCD1G3V325 749 aa16.67■□□□□ 0.26
SH2D3C-206ENST00000429553 ORC4O43929 436 aa16.67■□□□□ 0.26
SH2D3C-206ENST00000429553 PTCD1O75127 700 aaKnown RBP16.67■□□□□ 0.26
SH2D3C-206ENST00000429553 CTNNA1P35221 906 aaKnown RBP16.67■□□□□ 0.26
SH2D3C-206ENST00000429553 CTDSPL2Q05D32 466 aa16.67■□□□□ 0.26
SH2D3C-206ENST00000429553 PDCD2Q16342 344 aaPredicted RBP16.67■□□□□ 0.26
SH2D3C-206ENST00000429553 EARS2Q5JPH6 523 aaKnown RBP16.67■□□□□ 0.26
SH2D3C-206ENST00000429553 LMBR1LQ6UX01 489 aa16.67■□□□□ 0.26
SH2D3C-206ENST00000429553 DDX42Q86XP3 938 aaKnown RBP eCLIP16.67■□□□□ 0.26
SH2D3C-206ENST00000429553 CCDC197Q8NCU1 140 aa16.67■□□□□ 0.26
SH2D3C-206ENST00000429553 WHAMMQ8TF30 809 aa16.67■□□□□ 0.26
SH2D3C-206ENST00000429553 XAGE3Q8WTP9 111 aa16.67■□□□□ 0.26
SH2D3C-206ENST00000429553 NLRP3Q96P20 1036 aa16.67■□□□□ 0.26
SH2D3C-206ENST00000429553 UBAC1Q9BSL1 405 aa16.67■□□□□ 0.26
SH2D3C-206ENST00000429553 PLCB1Q9NQ66 1216 aa16.67■□□□□ 0.26
SH2D3C-206ENST00000429553 ZFATQ9P243 1243 aa16.67■□□□□ 0.26
SH2D3C-206ENST00000429553 DPPA5A6NC42 116 aa16.66■□□□□ 0.26
SH2D3C-206ENST00000429553 CFAP221Q4G0U5 840 aa16.66■□□□□ 0.26
SH2D3C-206ENST00000429553 COPS6Q7L5N1 327 aa16.66■□□□□ 0.26
SH2D3C-206ENST00000429553 RPUSD2Q8IZ73 545 aaKnown RBP16.66■□□□□ 0.26
SH2D3C-206ENST00000429553 KCNV2Q8TDN2 545 aa16.66■□□□□ 0.26
SH2D3C-206ENST00000429553 TSC22D3Q99576 134 aa16.66■□□□□ 0.26
SH2D3C-206ENST00000429553 OSBPL1AQ9BXW6 950 aa16.66■□□□□ 0.26
SH2D3C-206ENST00000429553 EVI5O60447 810 aa16.66■□□□□ 0.26
SH2D3C-206ENST00000429553 SMIM24O75264 130 aa16.66■□□□□ 0.26
SH2D3C-206ENST00000429553 FMNL1O95466 1100 aaPredicted RBP16.66■□□□□ 0.26
SH2D3C-206ENST00000429553 LAMB3Q13751 1172 aa16.66■□□□□ 0.26
SH2D3C-206ENST00000429553 ATG9AQ7Z3C6 839 aa16.66■□□□□ 0.26
SH2D3C-206ENST00000429553 FOXP1Q9H334 677 aaPredicted RBP16.66■□□□□ 0.26
SH2D3C-206ENST00000429553 KCNMB3Q9NPA1 279 aa16.66■□□□□ 0.26
SH2D3C-206ENST00000429553 CEP131Q9UPN4 1083 aa16.66■□□□□ 0.26
SH2D3C-206ENST00000429553 THRAP3Q9Y2W1 955 aaKnown RBP16.66■□□□□ 0.26
SH2D3C-206ENST00000429553 SPDYE3A6NKU9 549 aa16.66■□□□□ 0.26
SH2D3C-206ENST00000429553 RAD51CO43502 376 aa16.66■□□□□ 0.26
SH2D3C-206ENST00000429553 ALDH5A1P51649 535 aaPredicted RBP16.66■□□□□ 0.26
SH2D3C-206ENST00000429553 ZNF268Q14587 947 aaPredicted RBP16.66■□□□□ 0.26
SH2D3C-206ENST00000429553 ZNF530Q6P9A1 599 aaPredicted RBP16.66■□□□□ 0.26
SH2D3C-206ENST00000429553 KLHL7Q8IXQ5 586 aa16.66■□□□□ 0.26
SH2D3C-206ENST00000429553 CCHCR1Q8TD31 782 aa16.66■□□□□ 0.26
SH2D3C-206ENST00000429553 CABLES1Q8TDN4 633 aa16.66■□□□□ 0.26
SH2D3C-206ENST00000429553 IGDCC4Q8TDY8 1250 aa16.66■□□□□ 0.26
SH2D3C-206ENST00000429553 EZH1Q92800 747 aaPredicted RBP16.66■□□□□ 0.26
SH2D3C-206ENST00000429553 MTMR8Q96EF0 704 aa16.66■□□□□ 0.26
SH2D3C-206ENST00000429553 ALS2CR12Q96Q35 445 aa16.66■□□□□ 0.26
SH2D3C-206ENST00000429553 KDM3BQ7LBC6 1761 aa16.65■□□□□ 0.26
SH2D3C-206ENST00000429553 NKRFO15226 690 aaKnown RBP eCLIP16.65■□□□□ 0.26
SH2D3C-206ENST00000429553 GPAA1O43292 621 aa16.65■□□□□ 0.26
SH2D3C-206ENST00000429553 ZBED6P86452 979 aa16.65■□□□□ 0.26
SH2D3C-206ENST00000429553 USP4Q13107 963 aa16.65■□□□□ 0.26
SH2D3C-206ENST00000429553 HLFQ16534 295 aa16.65■□□□□ 0.26
SH2D3C-206ENST00000429553 TMEM67Q5HYA8 995 aa16.65■□□□□ 0.26
SH2D3C-206ENST00000429553 ANKRD20A2Q5SQ80 823 aa16.65■□□□□ 0.26
SH2D3C-206ENST00000429553 ANKRD20A1Q5TYW2 823 aa16.65■□□□□ 0.26
SH2D3C-206ENST00000429553 KLHDC7AQ5VTJ3 777 aa16.65■□□□□ 0.26
SH2D3C-206ENST00000429553 ANKRD20A3Q5VUR7 823 aa16.65■□□□□ 0.26
SH2D3C-206ENST00000429553 TRIM68Q6AZZ1 485 aa16.65■□□□□ 0.26
SH2D3C-206ENST00000429553 CNKSR1Q969H4 720 aa16.65■□□□□ 0.26
SH2D3C-206ENST00000429553 CHMP6Q96FZ7 201 aa16.65■□□□□ 0.26
SH2D3C-206ENST00000429553 LY9Q9HBG7 655 aa16.65■□□□□ 0.26
SH2D3C-206ENST00000429553 ARHGAP20Q9P2F6 1191 aa16.65■□□□□ 0.26
SH2D3C-206ENST00000429553 PDS5AQ29RF7 1337 aaKnown RBP16.65■□□□□ 0.26
SH2D3C-206ENST00000429553 SPATA31A3Q5VYP0 1347 aa16.65■□□□□ 0.26
SH2D3C-206ENST00000429553 LMO7Q8WWI1 1683 aa16.65■□□□□ 0.26
SH2D3C-206ENST00000429553 COL18A1P39060 1754 aa16.65■□□□□ 0.26
SH2D3C-206ENST00000429553 H7C1D1 291 aa16.65■□□□□ 0.26
SH2D3C-206ENST00000429553 IFIT3O14879 490 aaKnown RBP16.65■□□□□ 0.26
SH2D3C-206ENST00000429553 PAEPP09466 180 aa16.65■□□□□ 0.26
SH2D3C-206ENST00000429553 TMC4Q7Z404 712 aa16.65■□□□□ 0.26
SH2D3C-206ENST00000429553 EPAS1Q99814 870 aa16.65■□□□□ 0.26
SH2D3C-206ENST00000429553 LMCD1Q9NZU5 365 aa16.65■□□□□ 0.26
SH2D3C-206ENST00000429553 STK36Q9NRP7 1315 aa16.65■□□□□ 0.26
SH2D3C-206ENST00000429553 SPDYE5A6NIY4 337 aa16.64■□□□□ 0.25
SH2D3C-206ENST00000429553 TRIM75PA6NK02 468 aa16.64■□□□□ 0.25
SH2D3C-206ENST00000429553 CTNND1O60716 968 aaKnown RBP16.64■□□□□ 0.25
SH2D3C-206ENST00000429553 SRGNP10124 158 aa16.64■□□□□ 0.25
SH2D3C-206ENST00000429553 TUBP50607 506 aa16.64■□□□□ 0.25
SH2D3C-206ENST00000429553 SLMAPQ14BN4 828 aa16.64■□□□□ 0.25
SH2D3C-206ENST00000429553 RABL6Q3YEC7 729 aaPredicted RBP16.64■□□□□ 0.25
SH2D3C-206ENST00000429553 LRRC24Q50LG9 513 aa16.64■□□□□ 0.25
SH2D3C-206ENST00000429553 PI16Q6UXB8 463 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms