RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 KCNJ14Q9UNX9 436 aa9.76□□□□□ -0.85
CTNND1-208ENST00000428599 DTNBO60941 627 aa9.75□□□□□ -0.85
CTNND1-208ENST00000428599 ABCB4P21439 1286 aa9.75□□□□□ -0.85
CTNND1-208ENST00000428599 INPP5BP32019 993 aa9.75□□□□□ -0.85
CTNND1-208ENST00000428599 KRT71Q3SY84 523 aa9.75□□□□□ -0.85
CTNND1-208ENST00000428599 ZBTB33Q86T24 672 aa9.75□□□□□ -0.85
CTNND1-208ENST00000428599 MYLK4Q86YV6 388 aaPredicted RBP9.75□□□□□ -0.85
CTNND1-208ENST00000428599 ZNF654Q8IZM8 581 aa9.75□□□□□ -0.85
CTNND1-208ENST00000428599 PDZD8Q8NEN9 1154 aa9.75□□□□□ -0.85
CTNND1-208ENST00000428599 NLRC4Q9NPP4 1024 aa9.75□□□□□ -0.85
CTNND1-208ENST00000428599 DDX25Q9UHL0 483 aaKnown RBP9.75□□□□□ -0.85
CTNND1-208ENST00000428599 PCDHA12Q9UN75 941 aa9.75□□□□□ -0.85
CTNND1-208ENST00000428599 FAN1Q9Y2M0 1017 aa9.75□□□□□ -0.85
CTNND1-208ENST00000428599 AXIN2Q9Y2T1 843 aa9.75□□□□□ -0.85
CTNND1-208ENST00000428599 BZW2Q9Y6E2 419 aaKnown RBP9.75□□□□□ -0.85
CTNND1-208ENST00000428599 H7C0C1 242 aa9.75□□□□□ -0.85
CTNND1-208ENST00000428599 CYP27B1O15528 508 aa9.75□□□□□ -0.85
CTNND1-208ENST00000428599 ZNF202O95125 648 aa9.75□□□□□ -0.85
CTNND1-208ENST00000428599 GSPT1P15170 499 aaKnown RBP9.75□□□□□ -0.85
CTNND1-208ENST00000428599 NSFP46459 744 aaKnown RBP9.75□□□□□ -0.85
CTNND1-208ENST00000428599 ATP5OP48047 213 aa9.75□□□□□ -0.85
CTNND1-208ENST00000428599 BPIFB4P59827 614 aa9.75□□□□□ -0.85
CTNND1-208ENST00000428599 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.75□□□□□ -0.85
CTNND1-208ENST00000428599 MGARPQ8TDB4 240 aa9.75□□□□□ -0.85
CTNND1-208ENST00000428599 HSPD1P10809 573 aaKnown RBP9.75□□□□□ -0.85
CTNND1-208ENST00000428599 ARPP19P56211 112 aa9.75□□□□□ -0.85
CTNND1-208ENST00000428599 STX1BP61266 288 aa9.75□□□□□ -0.85
CTNND1-208ENST00000428599 PDE1CQ14123 709 aaPredicted RBP9.75□□□□□ -0.85
CTNND1-208ENST00000428599 GALNT17Q6IS24 598 aa9.75□□□□□ -0.85
CTNND1-208ENST00000428599 MIS18BP1Q6P0N0 1132 aa9.75□□□□□ -0.85
CTNND1-208ENST00000428599 MICAL1Q8TDZ2 1067 aa9.75□□□□□ -0.85
CTNND1-208ENST00000428599 CACTINQ8WUQ7 758 aaKnown RBP9.75□□□□□ -0.85
CTNND1-208ENST00000428599 ATP6V0A1Q93050 837 aa9.75□□□□□ -0.85
CTNND1-208ENST00000428599 ZSCAN10Q96SZ4 725 aaPredicted RBP9.75□□□□□ -0.85
CTNND1-208ENST00000428599 DBNDD1Q9H9R9 158 aa9.75□□□□□ -0.85
CTNND1-208ENST00000428599 VPS54Q9P1Q0 977 aa9.75□□□□□ -0.85
CTNND1-208ENST00000428599 CLTCQ00610 1675 aaKnown RBP9.75□□□□□ -0.85
CTNND1-208ENST00000428599 BBOX1O75936 387 aa9.75□□□□□ -0.85
CTNND1-208ENST00000428599 ASPHQ12797 758 aa9.75□□□□□ -0.85
CTNND1-208ENST00000428599 POLA2Q14181 598 aa9.75□□□□□ -0.85
CTNND1-208ENST00000428599 ABCB5Q2M3G0 1257 aa9.75□□□□□ -0.85
CTNND1-208ENST00000428599 TMC4Q7Z404 712 aa9.75□□□□□ -0.85
CTNND1-208ENST00000428599 WHAMMQ8TF30 809 aa9.75□□□□□ -0.85
CTNND1-208ENST00000428599 ZBED2Q9BTP6 218 aa9.75□□□□□ -0.85
CTNND1-208ENST00000428599 METTL14Q9HCE5 456 aaKnown RBP9.75□□□□□ -0.85
CTNND1-208ENST00000428599 ARMCX3Q9UH62 379 aaPredicted RBP9.75□□□□□ -0.85
CTNND1-208ENST00000428599 SEPT9Q9UHD8 586 aaPredicted RBP9.75□□□□□ -0.85
CTNND1-208ENST00000428599 MAD1L1Q9Y6D9 718 aa9.75□□□□□ -0.85
CTNND1-208ENST00000428599 NVLO15381 856 aaKnown RBP9.75□□□□□ -0.85
CTNND1-208ENST00000428599 CSPG5O95196 566 aa9.75□□□□□ -0.85
CTNND1-208ENST00000428599 IL1RL1Q01638 556 aa9.75□□□□□ -0.85
CTNND1-208ENST00000428599 PTH1RQ03431 593 aa9.75□□□□□ -0.85
CTNND1-208ENST00000428599 LONRF3Q496Y0 759 aa9.75□□□□□ -0.85
CTNND1-208ENST00000428599 HS1BP3Q53T59 392 aa9.75□□□□□ -0.85
CTNND1-208ENST00000428599 BLIDQ8IZY5 108 aa9.75□□□□□ -0.85
CTNND1-208ENST00000428599 TMEM232C9JQI7 657 aa9.74□□□□□ -0.85
CTNND1-208ENST00000428599 M0R2C6 588 aa9.74□□□□□ -0.85
CTNND1-208ENST00000428599 FOSP01100 380 aaPredicted RBP9.74□□□□□ -0.85
CTNND1-208ENST00000428599 RAPH1Q70E73 1250 aa9.74□□□□□ -0.85
CTNND1-208ENST00000428599 NDUFAF2Q8N183 169 aa9.74□□□□□ -0.85
CTNND1-208ENST00000428599 LRRC47Q8N1G4 583 aaKnown RBP9.74□□□□□ -0.85
CTNND1-208ENST00000428599 PGBD1Q96JS3 809 aa9.74□□□□□ -0.85
CTNND1-208ENST00000428599 PSMB7Q99436 277 aa9.74□□□□□ -0.85
CTNND1-208ENST00000428599 KLHL14Q9P2G3 628 aa9.74□□□□□ -0.85
CTNND1-208ENST00000428599 DBNLQ9UJU6 430 aaKnown RBP9.74□□□□□ -0.85
CTNND1-208ENST00000428599 NFE2L3Q9Y4A8 694 aa9.74□□□□□ -0.85
CTNND1-208ENST00000428599 JAK2O60674 1132 aa9.74□□□□□ -0.85
CTNND1-208ENST00000428599 HSPA8P11142 646 aaKnown RBP9.74□□□□□ -0.85
CTNND1-208ENST00000428599 ATF2P15336 505 aa9.74□□□□□ -0.85
CTNND1-208ENST00000428599 ODR4Q5SWX8 454 aa9.74□□□□□ -0.85
CTNND1-208ENST00000428599 FAM173BQ6P4H8 233 aa9.74□□□□□ -0.85
CTNND1-208ENST00000428599 PNMA8AQ86V59 439 aaPredicted RBP9.74□□□□□ -0.85
CTNND1-208ENST00000428599 RFX6Q8HWS3 928 aa9.74□□□□□ -0.85
CTNND1-208ENST00000428599 MCUQ8NE86 351 aa9.74□□□□□ -0.85
CTNND1-208ENST00000428599 TLR7Q9NYK1 1049 aaKnown RBP9.74□□□□□ -0.85
CTNND1-208ENST00000428599 SLC13A4Q9UKG4 626 aa9.74□□□□□ -0.85
CTNND1-208ENST00000428599 ZNF215Q9UL58 517 aaPredicted RBP9.74□□□□□ -0.85
CTNND1-208ENST00000428599 ATP10DQ9P241 1426 aa9.74□□□□□ -0.85
CTNND1-208ENST00000428599 RNF123Q5XPI4 1314 aa9.74□□□□□ -0.85
CTNND1-208ENST00000428599 CLRN2A0PK11 232 aa9.74□□□□□ -0.85
CTNND1-208ENST00000428599 TECP42680 631 aa9.74□□□□□ -0.85
CTNND1-208ENST00000428599 SLFN13Q68D06 897 aa9.74□□□□□ -0.85
CTNND1-208ENST00000428599 CCDC51Q96ER9 411 aa9.74□□□□□ -0.85
CTNND1-208ENST00000428599 HOMER3Q9NSC5 361 aa9.74□□□□□ -0.85
CTNND1-208ENST00000428599 OGFRQ9NZT2 677 aa9.74□□□□□ -0.85
CTNND1-208ENST00000428599 ORC6Q9Y5N6 252 aa9.74□□□□□ -0.85
CTNND1-208ENST00000428599 ABCD1P33897 745 aa9.74□□□□□ -0.85
CTNND1-208ENST00000428599 MFAP3P55082 362 aa9.74□□□□□ -0.85
CTNND1-208ENST00000428599 Q3C1V9 767 aa9.74□□□□□ -0.85
CTNND1-208ENST00000428599 GPIHBP1Q8IV16 184 aa9.74□□□□□ -0.85
CTNND1-208ENST00000428599 PPM1KQ8N3J5 372 aa9.74□□□□□ -0.85
CTNND1-208ENST00000428599 GDAP1Q8TB36 358 aa9.74□□□□□ -0.85
CTNND1-208ENST00000428599 SLF1Q9BQI6 1058 aa9.74□□□□□ -0.85
CTNND1-208ENST00000428599 OLA1Q9NTK5 396 aaKnown RBP9.74□□□□□ -0.85
CTNND1-208ENST00000428599 TRPM1Q7Z4N2 1603 aa9.73□□□□□ -0.85
CTNND1-208ENST00000428599 KRIT1O00522 736 aa9.73□□□□□ -0.85
CTNND1-208ENST00000428599 PHEXP78562 749 aa9.73□□□□□ -0.85
CTNND1-208ENST00000428599 PTK2Q05397 1052 aa9.73□□□□□ -0.85
CTNND1-208ENST00000428599 NEK8Q86SG6 692 aa9.73□□□□□ -0.85
CTNND1-208ENST00000428599 CMTR1Q8N1G2 835 aaKnown RBP9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms