RNA–Protein interactions for RNA: ENST00000428482.5

HDLBP-216, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 1,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-216ENST00000428482 KCNB2Q92953 911 aa11.87□□□□□ -0.51
HDLBP-216ENST00000428482 TMEM87BQ96K49 555 aa11.87□□□□□ -0.51
HDLBP-216ENST00000428482 VTA1Q9NP79 307 aa11.87□□□□□ -0.51
HDLBP-216ENST00000428482 PXMP2Q9NR77 195 aa11.87□□□□□ -0.51
HDLBP-216ENST00000428482 TELO2Q9Y4R8 837 aa11.87□□□□□ -0.51
HDLBP-216ENST00000428482 CHD9Q3L8U1 2897 aa11.87□□□□□ -0.51
HDLBP-216ENST00000428482 KLF18A0A0U1RQI7 1052 aa11.86□□□□□ -0.51
HDLBP-216ENST00000428482 TRIM43BA6NCK2 446 aa11.86□□□□□ -0.51
HDLBP-216ENST00000428482 GOLGA8AA7E2F4 631 aa11.86□□□□□ -0.51
HDLBP-216ENST00000428482 EPB41L2O43491 1005 aaKnown RBP11.86□□□□□ -0.51
HDLBP-216ENST00000428482 ASGR1P07306 291 aa11.86□□□□□ -0.51
HDLBP-216ENST00000428482 CDC27P30260 824 aa11.86□□□□□ -0.51
HDLBP-216ENST00000428482 GHRHRQ02643 423 aa11.86□□□□□ -0.51
HDLBP-216ENST00000428482 TNFAIP2Q03169 654 aa11.86□□□□□ -0.51
HDLBP-216ENST00000428482 PDE4DQ08499 809 aa11.86□□□□□ -0.51
HDLBP-216ENST00000428482 CXCL17Q6UXB2 119 aa11.86□□□□□ -0.51
HDLBP-216ENST00000428482 NOL8Q76FK4 1167 aaKnown RBP11.86□□□□□ -0.51
HDLBP-216ENST00000428482 RNF180Q86T96 592 aa11.86□□□□□ -0.51
HDLBP-216ENST00000428482 SGMS1Q86VZ5 419 aa11.86□□□□□ -0.51
HDLBP-216ENST00000428482 CTCFLQ8NI51 663 aaPredicted RBP11.86□□□□□ -0.51
HDLBP-216ENST00000428482 TRIM43Q96BQ3 446 aaPredicted RBP11.86□□□□□ -0.51
HDLBP-216ENST00000428482 LARP6Q9BRS8 491 aaKnown RBP11.86□□□□□ -0.51
HDLBP-216ENST00000428482 SPZ1Q9BXG8 430 aa11.86□□□□□ -0.51
HDLBP-216ENST00000428482 AMNQ9BXJ7 453 aa11.86□□□□□ -0.51
HDLBP-216ENST00000428482 PCDHA1Q9Y5I3 950 aa11.86□□□□□ -0.51
HDLBP-216ENST00000428482 NID2Q14112 1375 aa11.86□□□□□ -0.51
HDLBP-216ENST00000428482 GRIN2DO15399 1336 aa11.86□□□□□ -0.51
HDLBP-216ENST00000428482 FRMPD4Q14CM0 1322 aa11.86□□□□□ -0.51
HDLBP-216ENST00000428482 UMODL1Q5DID0 1318 aa11.86□□□□□ -0.51
HDLBP-216ENST00000428482 TRIP12Q14669 1992 aaPredicted RBP11.85□□□□□ -0.51
HDLBP-216ENST00000428482 RGS20O76081 388 aa11.85□□□□□ -0.51
HDLBP-216ENST00000428482 FUT2Q10981 343 aa11.85□□□□□ -0.51
HDLBP-216ENST00000428482 PPP2R5BQ15173 497 aa11.85□□□□□ -0.51
HDLBP-216ENST00000428482 FSCN1Q16658 493 aaKnown RBP11.85□□□□□ -0.51
HDLBP-216ENST00000428482 WWC2Q6AWC2 1192 aa11.85□□□□□ -0.51
HDLBP-216ENST00000428482 Q6ZUG5 572 aa11.85□□□□□ -0.51
HDLBP-216ENST00000428482 ARRDC4Q8NCT1 418 aa11.85□□□□□ -0.51
HDLBP-216ENST00000428482 OR6J1Q8NGC5 347 aa11.85□□□□□ -0.51
HDLBP-216ENST00000428482 PGBD1Q96JS3 809 aa11.85□□□□□ -0.51
HDLBP-216ENST00000428482 GDF15Q99988 308 aa11.85□□□□□ -0.51
HDLBP-216ENST00000428482 UPF3BQ9BZI7 483 aaKnown RBP11.85□□□□□ -0.51
HDLBP-216ENST00000428482 STARD7Q9NQZ5 370 aa11.85□□□□□ -0.51
HDLBP-216ENST00000428482 FAM217BQ9NTX9 383 aaPredicted RBP11.85□□□□□ -0.51
HDLBP-216ENST00000428482 MRPL11Q9Y3B7 192 aaKnown RBP11.85□□□□□ -0.51
HDLBP-216ENST00000428482 DYNC1LI2O43237 492 aaPredicted RBP11.84□□□□□ -0.51
HDLBP-216ENST00000428482 CASTP20810 708 aaKnown RBP11.84□□□□□ -0.51
HDLBP-216ENST00000428482 RPS6KB1P23443 525 aa11.84□□□□□ -0.51
HDLBP-216ENST00000428482 LIFRP42702 1097 aa11.84□□□□□ -0.51
HDLBP-216ENST00000428482 TLE2Q04725 743 aa11.84□□□□□ -0.51
HDLBP-216ENST00000428482 SEMA3FQ13275 785 aa11.84□□□□□ -0.51
HDLBP-216ENST00000428482 RTN1Q16799 776 aa11.84□□□□□ -0.51
HDLBP-216ENST00000428482 LY6KQ17RY6 165 aa11.84□□□□□ -0.51
HDLBP-216ENST00000428482 RNF20Q5VTR2 975 aa11.84□□□□□ -0.51
HDLBP-216ENST00000428482 USP17L6PQ6QN14 398 aa11.84□□□□□ -0.51
HDLBP-216ENST00000428482 SEPT14Q6ZU15 432 aa11.84□□□□□ -0.51
HDLBP-216ENST00000428482 FCHSD1Q86WN1 690 aa11.84□□□□□ -0.51
HDLBP-216ENST00000428482 BRF1Q92994 677 aa11.84□□□□□ -0.51
HDLBP-216ENST00000428482 LRCH3Q96II8 777 aa11.84□□□□□ -0.51
HDLBP-216ENST00000428482 RMDN3Q96TC7 470 aa11.84□□□□□ -0.51
HDLBP-216ENST00000428482 PDCD2LQ9BRP1 358 aa11.84□□□□□ -0.51
HDLBP-216ENST00000428482 WDR11Q9BZH6 1224 aa11.84□□□□□ -0.51
HDLBP-216ENST00000428482 TSHZ2Q9NRE2 1034 aa11.84□□□□□ -0.51
HDLBP-216ENST00000428482 ADD3Q9UEY8 706 aaKnown RBP11.84□□□□□ -0.51
HDLBP-216ENST00000428482 NAP1L2Q9ULW6 460 aaPredicted RBP11.84□□□□□ -0.51
HDLBP-216ENST00000428482 NR2E3Q9Y5X4 410 aa11.84□□□□□ -0.51
HDLBP-216ENST00000428482 SLC12A7Q9Y666 1083 aa11.84□□□□□ -0.51
HDLBP-216ENST00000428482 PNMA6FA0A0J9YX94 578 aa11.83□□□□□ -0.52
HDLBP-216ENST00000428482 RBM47A0AV96 593 aaKnown RBP11.83□□□□□ -0.52
HDLBP-216ENST00000428482 ZBTB43O43298 467 aa11.83□□□□□ -0.52
HDLBP-216ENST00000428482 MYCLP12524 364 aaPredicted RBP11.83□□□□□ -0.52
HDLBP-216ENST00000428482 EPHB4P54760 987 aa11.83□□□□□ -0.52
HDLBP-216ENST00000428482 ARHGAP1Q07960 439 aa11.83□□□□□ -0.52
HDLBP-216ENST00000428482 MAPK8IP2Q13387 824 aaPredicted RBP11.83□□□□□ -0.52
HDLBP-216ENST00000428482 TOB2Q14106 344 aaPredicted RBP11.83□□□□□ -0.52
HDLBP-216ENST00000428482 PGM5Q15124 567 aa11.83□□□□□ -0.52
HDLBP-216ENST00000428482 TSGA10IPQ3SY00 556 aa11.83□□□□□ -0.52
HDLBP-216ENST00000428482 DUSP28Q4G0W2 176 aa11.83□□□□□ -0.52
HDLBP-216ENST00000428482 ARHGEF16Q5VV41 709 aa11.83□□□□□ -0.52
HDLBP-216ENST00000428482 DHX32Q7L7V1 743 aaKnown RBP11.83□□□□□ -0.52
HDLBP-216ENST00000428482 HEATR3Q7Z4Q2 680 aa11.83□□□□□ -0.52
HDLBP-216ENST00000428482 DNERQ8NFT8 737 aa11.83□□□□□ -0.52
HDLBP-216ENST00000428482 BCAS3Q9H6U6 928 aa11.83□□□□□ -0.52
HDLBP-216ENST00000428482 NCOA5Q9HCD5 579 aaKnown RBP11.83□□□□□ -0.52
HDLBP-216ENST00000428482 WDR81Q562E7 1941 aa11.83□□□□□ -0.52
HDLBP-216ENST00000428482 COL4A4P53420 1690 aaPredicted RBP11.82□□□□□ -0.52
HDLBP-216ENST00000428482 MOXD2PA6NHM9 499 aa11.82□□□□□ -0.52
HDLBP-216ENST00000428482 MEIS2O14770 477 aa11.82□□□□□ -0.52
HDLBP-216ENST00000428482 SEC24BO95487 1268 aa11.82□□□□□ -0.52
HDLBP-216ENST00000428482 MMP3P08254 477 aa11.82□□□□□ -0.52
HDLBP-216ENST00000428482 MYL3P08590 195 aa11.82□□□□□ -0.52
HDLBP-216ENST00000428482 CLTBP09497 229 aa11.82□□□□□ -0.52
HDLBP-216ENST00000428482 ZNF286BP0CG31 522 aa11.82□□□□□ -0.52
HDLBP-216ENST00000428482 UBA1P22314 1058 aaKnown RBP11.82□□□□□ -0.52
HDLBP-216ENST00000428482 NKX3-2P78367 333 aa11.82□□□□□ -0.52
HDLBP-216ENST00000428482 MRPS9P82933 396 aaKnown RBP11.82□□□□□ -0.52
HDLBP-216ENST00000428482 FAAP100Q0VG06 881 aa11.82□□□□□ -0.52
HDLBP-216ENST00000428482 GNASQ5JWF2 1037 aa11.82□□□□□ -0.52
HDLBP-216ENST00000428482 C9orf50Q5SZB4 431 aa11.82□□□□□ -0.52
HDLBP-216ENST00000428482 CCDC62Q6P9F0 684 aa11.82□□□□□ -0.52
HDLBP-216ENST00000428482 BLOC1S2Q6QNY1 142 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms