RNA–Protein interactions for RNA: ENST00000427746.1

HLCS-204, Transcript of holocarboxylase synthetase, humanhuman

TSL 3

Gene HLCS, Length 666 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-204ENST00000427746 ZNF654Q8IZM8 581 aa22.47■■□□□ 1.19
HLCS-204ENST00000427746 CCDC136Q96JN2 1154 aa22.47■■□□□ 1.19
HLCS-204ENST00000427746 IWS1Q96ST2 819 aa22.47■■□□□ 1.19
HLCS-204ENST00000427746 RMDN3Q96TC7 470 aa22.47■■□□□ 1.19
HLCS-204ENST00000427746 GRIN2DO15399 1336 aa22.47■■□□□ 1.19
HLCS-204ENST00000427746 SH2B2O14492 632 aaPredicted RBP22.46■■□□□ 1.19
HLCS-204ENST00000427746 DDAH1O94760 285 aa22.46■■□□□ 1.19
HLCS-204ENST00000427746 CFBP00751 764 aa22.46■■□□□ 1.19
HLCS-204ENST00000427746 RAG1P15918 1043 aa22.46■■□□□ 1.19
HLCS-204ENST00000427746 PPP2R5BQ15173 497 aa22.46■■□□□ 1.19
HLCS-204ENST00000427746 HOMER1Q86YM7 354 aa22.46■■□□□ 1.19
HLCS-204ENST00000427746 TMEM87BQ96K49 555 aa22.46■■□□□ 1.19
HLCS-204ENST00000427746 MAP3K20Q9NYL2 800 aaKnown RBP22.46■■□□□ 1.19
HLCS-204ENST00000427746 PNMA6FA0A0J9YX94 578 aa22.45■■□□□ 1.18
HLCS-204ENST00000427746 NKRFO15226 690 aaKnown RBP eCLIP22.45■■□□□ 1.18
HLCS-204ENST00000427746 CDC45O75419 566 aa22.45■■□□□ 1.18
HLCS-204ENST00000427746 ARIH2O95376 493 aa22.45■■□□□ 1.18
HLCS-204ENST00000427746 CD4P01730 458 aa22.45■■□□□ 1.18
HLCS-204ENST00000427746 TRAF1Q13077 416 aa22.45■■□□□ 1.18
HLCS-204ENST00000427746 ITGA7Q13683 1181 aa22.45■■□□□ 1.18
HLCS-204ENST00000427746 CCDC62Q6P9F0 684 aa22.45■■□□□ 1.18
HLCS-204ENST00000427746 TMTC2Q8N394 836 aa22.45■■□□□ 1.18
HLCS-204ENST00000427746 MYL10Q9BUA6 226 aa22.45■■□□□ 1.18
HLCS-204ENST00000427746 TXNP10599 105 aaKnown RBP22.44■■□□□ 1.18
HLCS-204ENST00000427746 LIFRP42702 1097 aa22.44■■□□□ 1.18
HLCS-204ENST00000427746 CPT1AP50416 773 aa22.44■■□□□ 1.18
HLCS-204ENST00000427746 SHHQ15465 462 aa22.44■■□□□ 1.18
HLCS-204ENST00000427746 C9orf50Q5SZB4 431 aa22.44■■□□□ 1.18
HLCS-204ENST00000427746 SAMD3Q8N6K7 520 aa22.44■■□□□ 1.18
HLCS-204ENST00000427746 OR6J1Q8NGC5 347 aa22.44■■□□□ 1.18
HLCS-204ENST00000427746 COPS5Q92905 334 aa22.44■■□□□ 1.18
HLCS-204ENST00000427746 SEZ6LQ9BYH1 1024 aa22.44■■□□□ 1.18
HLCS-204ENST00000427746 PXMP2Q9NR77 195 aa22.44■■□□□ 1.18
HLCS-204ENST00000427746 TIMP1P01033 207 aa22.43■■□□□ 1.18
HLCS-204ENST00000427746 SMARCA1P28370 1054 aa22.43■■□□□ 1.18
HLCS-204ENST00000427746 EPHB4P54760 987 aa22.43■■□□□ 1.18
HLCS-204ENST00000427746 PURAQ00577 322 aaKnown RBP22.43■■□□□ 1.18
HLCS-204ENST00000427746 TTLL4Q14679 1199 aa22.43■■□□□ 1.18
HLCS-204ENST00000427746 STXBP2Q15833 593 aa22.43■■□□□ 1.18
HLCS-204ENST00000427746 ARHGEF16Q5VV41 709 aa22.43■■□□□ 1.18
HLCS-204ENST00000427746 SPZ1Q9BXG8 430 aa22.43■■□□□ 1.18
HLCS-204ENST00000427746 POLR3EQ9NVU0 708 aa22.43■■□□□ 1.18
HLCS-204ENST00000427746 A6NJR5 290 aa22.42■■□□□ 1.18
HLCS-204ENST00000427746 TLR3O15455 904 aaKnown RBP22.42■■□□□ 1.18
HLCS-204ENST00000427746 NR3C2P08235 984 aa22.42■■□□□ 1.18
HLCS-204ENST00000427746 EIF2AK2P19525 551 aaKnown RBP22.42■■□□□ 1.18
HLCS-204ENST00000427746 KIF5BP33176 963 aa22.42■■□□□ 1.18
HLCS-204ENST00000427746 PSMC6P62333 389 aa22.42■■□□□ 1.18
HLCS-204ENST00000427746 RNF20Q5VTR2 975 aa22.42■■□□□ 1.18
HLCS-204ENST00000427746 CTCFLQ8NI51 663 aaPredicted RBP22.42■■□□□ 1.18
HLCS-204ENST00000427746 CCDC69A6NI79 296 aa22.41■■□□□ 1.18
HLCS-204ENST00000427746 EIF3JO75822 258 aaKnown RBP22.41■■□□□ 1.18
HLCS-204ENST00000427746 HOXA13P31271 388 aaPredicted RBP22.41■■□□□ 1.18
HLCS-204ENST00000427746 FPGSQ05932 587 aa22.41■■□□□ 1.18
HLCS-204ENST00000427746 TSGA10IPQ3SY00 556 aa22.41■■□□□ 1.18
HLCS-204ENST00000427746 NFXL1Q6ZNB6 911 aa22.41■■□□□ 1.18
HLCS-204ENST00000427746 PDCD2LQ9BRP1 358 aa22.41■■□□□ 1.18
HLCS-204ENST00000427746 MFSD5Q6N075 450 aa22.4■■□□□ 1.18
HLCS-204ENST00000427746 SEPT14Q6ZU15 432 aa22.4■■□□□ 1.18
HLCS-204ENST00000427746 SGMS1Q86VZ5 419 aa22.4■■□□□ 1.18
HLCS-204ENST00000427746 RASEFQ8IZ41 740 aa22.4■■□□□ 1.18
HLCS-204ENST00000427746 LZTS2Q9BRK4 669 aa22.4■■□□□ 1.18
HLCS-204ENST00000427746 MTG1Q9BT17 334 aaPredicted RBP22.4■■□□□ 1.18
HLCS-204ENST00000427746 LRRC2Q9BYS8 371 aa22.4■■□□□ 1.18
HLCS-204ENST00000427746 BAZ2BQ9UIF8 2168 aaKnown RBP22.4■■□□□ 1.18
HLCS-204ENST00000427746 KIAA1217Q5T5P2 1943 aa22.39■■□□□ 1.18
HLCS-204ENST00000427746 GCOM1H8Y6P7 765 aaPredicted RBP22.39■■□□□ 1.17
HLCS-204ENST00000427746 PLEKHA8P1O95397 391 aa22.39■■□□□ 1.17
HLCS-204ENST00000427746 MYL3P08590 195 aa22.39■■□□□ 1.17
HLCS-204ENST00000427746 POLR2MP0CAP2 368 aa22.39■■□□□ 1.17
HLCS-204ENST00000427746 CALM1P0DP23 149 aa22.39■■□□□ 1.17
HLCS-204ENST00000427746 CALM2P0DP24 149 aa22.39■■□□□ 1.17
HLCS-204ENST00000427746 CALM3P0DP25 149 aa22.39■■□□□ 1.17
HLCS-204ENST00000427746 GNAQP50148 359 aa22.39■■□□□ 1.17
HLCS-204ENST00000427746 EXOSC10Q01780 885 aaKnown RBP22.39■■□□□ 1.17
HLCS-204ENST00000427746 ARHGAP1Q07960 439 aa22.39■■□□□ 1.17
HLCS-204ENST00000427746 LY6KQ17RY6 165 aa22.39■■□□□ 1.17
HLCS-204ENST00000427746 BRDTQ58F21 947 aaPredicted RBP22.39■■□□□ 1.17
HLCS-204ENST00000427746 SRBD1Q8N5C6 995 aaKnown RBP22.39■■□□□ 1.17
HLCS-204ENST00000427746 PIBF1Q8WXW3 757 aa22.39■■□□□ 1.17
HLCS-204ENST00000427746 NEK1Q96PY6 1258 aa22.39■■□□□ 1.17
HLCS-204ENST00000427746 B4GALT4O60513 344 aa22.38■■□□□ 1.17
HLCS-204ENST00000427746 KPNA6O60684 536 aa22.38■■□□□ 1.17
HLCS-204ENST00000427746 RGS20O76081 388 aa22.38■■□□□ 1.17
HLCS-204ENST00000427746 RXRAP19793 462 aa22.38■■□□□ 1.17
HLCS-204ENST00000427746 PGM5Q15124 567 aa22.38■■□□□ 1.17
HLCS-204ENST00000427746 VSIG10LQ86VR7 867 aa22.38■■□□□ 1.17
HLCS-204ENST00000427746 RRP36Q96EU6 259 aaKnown RBP22.38■■□□□ 1.17
HLCS-204ENST00000427746 TRPV6Q9H1D0 765 aa22.38■■□□□ 1.17
HLCS-204ENST00000427746 ALDH8A1Q9H2A2 487 aaPredicted RBP22.38■■□□□ 1.17
HLCS-204ENST00000427746 DDX41Q9UJV9 622 aaKnown RBP22.38■■□□□ 1.17
HLCS-204ENST00000427746 SLC12A7Q9Y666 1083 aa22.38■■□□□ 1.17
HLCS-204ENST00000427746 GH1P01241 217 aa22.37■■□□□ 1.17
HLCS-204ENST00000427746 ADCK5Q3MIX3 580 aa22.37■■□□□ 1.17
HLCS-204ENST00000427746 DEFB123Q8N688 67 aa22.37■■□□□ 1.17
HLCS-204ENST00000427746 IL31RAQ8NI17 732 aa22.37■■□□□ 1.17
HLCS-204ENST00000427746 PPP1R12CQ9BZL4 782 aa22.37■■□□□ 1.17
HLCS-204ENST00000427746 FRMPD4Q14CM0 1322 aa22.36■■□□□ 1.17
HLCS-204ENST00000427746 SCN10AQ9Y5Y9 1956 aa22.36■■□□□ 1.17
HLCS-204ENST00000427746 Q7L0L9 218 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms