RNA–Protein interactions for RNA: ENST00000427193.1

C9orf3-205, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-205ENST00000427193 FAM129CQ86XR2 697 aa8.25□□□□□ -1.09
C9orf3-205ENST00000427193 JAMLQ86YT9 394 aa8.25□□□□□ -1.09
C9orf3-205ENST00000427193 PPT2Q9UMR5 302 aa8.25□□□□□ -1.09
C9orf3-205ENST00000427193 PCDHA5Q9Y5H7 936 aa8.25□□□□□ -1.09
C9orf3-205ENST00000427193 KDM5CP41229 1560 aa8.25□□□□□ -1.09
C9orf3-205ENST00000427193 SHANK2Q9UPX8 1470 aa8.25□□□□□ -1.09
C9orf3-205ENST00000427193 GPATCH8Q9UKJ3 1502 aaKnown RBP8.24□□□□□ -1.09
C9orf3-205ENST00000427193 ZMYM3Q14202 1370 aa8.24□□□□□ -1.09
C9orf3-205ENST00000427193 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.24□□□□□ -1.09
C9orf3-205ENST00000427193 DIP2CQ9Y2E4 1556 aa8.24□□□□□ -1.09
C9orf3-205ENST00000427193 SASH1O94885 1247 aa8.24□□□□□ -1.09
C9orf3-205ENST00000427193 ITGA4P13612 1032 aa8.24□□□□□ -1.09
C9orf3-205ENST00000427193 MAPKAPK2P49137 400 aa8.24□□□□□ -1.09
C9orf3-205ENST00000427193 ZYXQ15942 572 aaKnown RBP8.24□□□□□ -1.09
C9orf3-205ENST00000427193 EFCAB2Q5VUJ9 269 aa8.24□□□□□ -1.09
C9orf3-205ENST00000427193 FIBCD1Q8N539 461 aa8.24□□□□□ -1.09
C9orf3-205ENST00000427193 BRF1Q92994 677 aa8.24□□□□□ -1.09
C9orf3-205ENST00000427193 DDX41Q9UJV9 622 aaKnown RBP8.24□□□□□ -1.09
C9orf3-205ENST00000427193 ZNF214Q9UL59 606 aaPredicted RBP8.24□□□□□ -1.09
C9orf3-205ENST00000427193 SF3B6Q9Y3B4 125 aaKnown RBP8.24□□□□□ -1.09
C9orf3-205ENST00000427193 KIF14Q15058 1648 aa8.24□□□□□ -1.09
C9orf3-205ENST00000427193 MROH2AA6NES4 1674 aa8.24□□□□□ -1.09
C9orf3-205ENST00000427193 MYOM3Q5VTT5 1437 aa8.23□□□□□ -1.09
C9orf3-205ENST00000427193 MIA2Q96PC5 1412 aa8.23□□□□□ -1.09
C9orf3-205ENST00000427193 A0A087WZG4 1122 aa8.23□□□□□ -1.09
C9orf3-205ENST00000427193 TP53P04637 393 aaPredicted RBP8.23□□□□□ -1.09
C9orf3-205ENST00000427193 CORO7P57737 925 aa8.23□□□□□ -1.09
C9orf3-205ENST00000427193 RACK1P63244 317 aaKnown RBP8.23□□□□□ -1.09
C9orf3-205ENST00000427193 PLEKHN1Q494U1 663 aaPredicted RBP8.23□□□□□ -1.09
C9orf3-205ENST00000427193 ZC3H14Q6PJT7 736 aaKnown RBP8.23□□□□□ -1.09
C9orf3-205ENST00000427193 LSRQ86X29 649 aaPredicted RBP8.23□□□□□ -1.09
C9orf3-205ENST00000427193 ZNF451Q9Y4E5 1061 aa8.23□□□□□ -1.09
C9orf3-205ENST00000427193 MLH3Q9UHC1 1453 aa8.22□□□□□ -1.09
C9orf3-205ENST00000427193 SRGAP3O43295 1099 aa8.22□□□□□ -1.09
C9orf3-205ENST00000427193 BUD31P41223 144 aaPredicted RBP8.22□□□□□ -1.09
C9orf3-205ENST00000427193 POU4F1Q01851 419 aa8.22□□□□□ -1.09
C9orf3-205ENST00000427193 TCEAL1Q15170 157 aa8.22□□□□□ -1.09
C9orf3-205ENST00000427193 RUFY4Q6ZNE9 571 aa8.22□□□□□ -1.09
C9orf3-205ENST00000427193 SPATA32Q96LK8 384 aa8.22□□□□□ -1.09
C9orf3-205ENST00000427193 FCRL3Q96P31 734 aaPredicted RBP8.22□□□□□ -1.09
C9orf3-205ENST00000427193 RTEL1Q9NZ71 1219 aa8.22□□□□□ -1.09
C9orf3-205ENST00000427193 SLC12A7Q9Y666 1083 aa8.22□□□□□ -1.09
C9orf3-205ENST00000427193 IRS2Q9Y4H2 1338 aa8.22□□□□□ -1.09
C9orf3-205ENST00000427193 FGD6Q6ZV73 1430 aa8.21□□□□□ -1.09
C9orf3-205ENST00000427193 SUPT6HQ7KZ85 1726 aaKnown RBP8.21□□□□□ -1.09
C9orf3-205ENST00000427193 BUB1BO60566 1050 aaPredicted RBP8.21□□□□□ -1.1
C9orf3-205ENST00000427193 TBC1D8O95759 1140 aa8.21□□□□□ -1.1
C9orf3-205ENST00000427193 CYBBP04839 570 aa8.21□□□□□ -1.1
C9orf3-205ENST00000427193 MSL3P1P0C860 447 aa8.21□□□□□ -1.1
C9orf3-205ENST00000427193 NFIXQ14938 502 aa8.21□□□□□ -1.1
C9orf3-205ENST00000427193 PAQR3Q6TCH7 311 aa8.21□□□□□ -1.1
C9orf3-205ENST00000427193 SP8Q8IXZ3 490 aa8.21□□□□□ -1.1
C9orf3-205ENST00000427193 RGS22Q8NE09 1264 aa8.21□□□□□ -1.1
C9orf3-205ENST00000427193 KRTAP4-11Q9BYQ6 195 aa8.21□□□□□ -1.1
C9orf3-205ENST00000427193 XYLT2Q9H1B5 865 aa8.21□□□□□ -1.1
C9orf3-205ENST00000427193 NOL6Q9H6R4 1146 aaKnown RBP8.21□□□□□ -1.1
C9orf3-205ENST00000427193 PDLIM7Q9NR12 457 aa8.21□□□□□ -1.1
C9orf3-205ENST00000427193 FAM86C1Q9NVL1 165 aa8.21□□□□□ -1.1
C9orf3-205ENST00000427193 CEP170BQ9Y4F5 1589 aaPredicted RBP8.2□□□□□ -1.1
C9orf3-205ENST00000427193 A0A1W2PQJ5 194 aa8.2□□□□□ -1.1
C9orf3-205ENST00000427193 DBHP09172 617 aa8.2□□□□□ -1.1
C9orf3-205ENST00000427193 PFKLP17858 780 aa8.2□□□□□ -1.1
C9orf3-205ENST00000427193 LINC01356Q8N9X3 169 aa8.2□□□□□ -1.1
C9orf3-205ENST00000427193 PWWP2AQ96N64 755 aa8.2□□□□□ -1.1
C9orf3-205ENST00000427193 PTCHD1Q96NR3 888 aa8.2□□□□□ -1.1
C9orf3-205ENST00000427193 CRBNQ96SW2 442 aa8.2□□□□□ -1.1
C9orf3-205ENST00000427193 DIS3Q9Y2L1 958 aaKnown RBP8.2□□□□□ -1.1
C9orf3-205ENST00000427193 MYO3AQ8NEV4 1616 aa8.19□□□□□ -1.1
C9orf3-205ENST00000427193 ZBTB7CA1YPR0 619 aa8.19□□□□□ -1.1
C9orf3-205ENST00000427193 SCAMP3O14828 347 aaKnown RBP8.19□□□□□ -1.1
C9orf3-205ENST00000427193 CBFA2T2O43439 604 aa8.19□□□□□ -1.1
C9orf3-205ENST00000427193 FOXD2O60548 495 aaPredicted RBP8.19□□□□□ -1.1
C9orf3-205ENST00000427193 CD3EP07766 207 aa8.19□□□□□ -1.1
C9orf3-205ENST00000427193 VAMP1P23763 118 aa8.19□□□□□ -1.1
C9orf3-205ENST00000427193 IGFBP6P24592 240 aaPredicted RBP8.19□□□□□ -1.1
C9orf3-205ENST00000427193 NCKAP1LP55160 1127 aa8.19□□□□□ -1.1
C9orf3-205ENST00000427193 ZNF200P98182 395 aaPredicted RBP8.19□□□□□ -1.1
C9orf3-205ENST00000427193 CAP1Q01518 475 aa8.19□□□□□ -1.1
C9orf3-205ENST00000427193 LCE5AQ5TCM9 118 aa8.19□□□□□ -1.1
C9orf3-205ENST00000427193 ZNF654Q8IZM8 581 aa8.19□□□□□ -1.1
C9orf3-205ENST00000427193 NLGN2Q8NFZ4 835 aa8.19□□□□□ -1.1
C9orf3-205ENST00000427193 LTBP3Q9NS15 1303 aa8.19□□□□□ -1.1
C9orf3-205ENST00000427193 CCNB3Q8WWL7 1395 aa8.19□□□□□ -1.1
C9orf3-205ENST00000427193 ABCA6Q8N139 1617 aa8.18□□□□□ -1.1
C9orf3-205ENST00000427193 MYO5CQ9NQX4 1742 aa8.18□□□□□ -1.1
C9orf3-205ENST00000427193 IFNGR1P15260 489 aa8.18□□□□□ -1.1
C9orf3-205ENST00000427193 SYN1P17600 705 aa8.18□□□□□ -1.1
C9orf3-205ENST00000427193 L1CAMP32004 1257 aa8.18□□□□□ -1.1
C9orf3-205ENST00000427193 TARBP2Q15633 366 aaKnown RBP8.18□□□□□ -1.1
C9orf3-205ENST00000427193 VMACQ2NL98 169 aa8.18□□□□□ -1.1
C9orf3-205ENST00000427193 BICRALQ6AI39 1079 aa8.18□□□□□ -1.1
C9orf3-205ENST00000427193 NLGN1Q8N2Q7 840 aa8.18□□□□□ -1.1
C9orf3-205ENST00000427193 ZDHHC15Q96MV8 337 aa8.18□□□□□ -1.1
C9orf3-205ENST00000427193 HAUS7Q99871 368 aa8.18□□□□□ -1.1
C9orf3-205ENST00000427193 PHAXQ9H814 394 aaKnown RBP8.18□□□□□ -1.1
C9orf3-205ENST00000427193 LUC7LQ9NQ29 371 aaKnown RBP8.18□□□□□ -1.1
C9orf3-205ENST00000427193 GINM1Q9NU53 330 aa8.18□□□□□ -1.1
C9orf3-205ENST00000427193 WHRNQ9P202 907 aa8.18□□□□□ -1.1
C9orf3-205ENST00000427193 KIAA1107Q9UPP5 1409 aa8.18□□□□□ -1.1
C9orf3-205ENST00000427193 MBD5Q9P267 1494 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms