RNA–Protein interactions for RNA: ENST00000426447.3

PDAP1-202, Transcript of PDGFA associated protein 1, humanhuman

TSL 5

Gene PDAP1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-202ENST00000426447 SLC30A10Q6XR72 485 aa17.28■□□□□ 0.36
PDAP1-202ENST00000426447 DCTPP1Q9H773 170 aa17.28■□□□□ 0.36
PDAP1-202ENST00000426447 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.28■□□□□ 0.36
PDAP1-202ENST00000426447 BDP1A6H8Y1 2624 aa17.28■□□□□ 0.36
PDAP1-202ENST00000426447 XIRP2A4UGR9 3374 aa17.28■□□□□ 0.36
PDAP1-202ENST00000426447 FAM86C2PA6NEL3 165 aa17.27■□□□□ 0.36
PDAP1-202ENST00000426447 BTNL9Q6UXG8 535 aa17.27■□□□□ 0.36
PDAP1-202ENST00000426447 CRBNQ96SW2 442 aa17.27■□□□□ 0.36
PDAP1-202ENST00000426447 LMCD1Q9NZU5 365 aa17.27■□□□□ 0.36
PDAP1-202ENST00000426447 PNMA2Q9UL42 364 aa17.27■□□□□ 0.36
PDAP1-202ENST00000426447 CHD7Q9P2D1 2997 aa17.27■□□□□ 0.35
PDAP1-202ENST00000426447 PRRC2BQ5JSZ5 2229 aaKnown RBP17.27■□□□□ 0.35
PDAP1-202ENST00000426447 LCHNA4D1U4 455 aa17.26■□□□□ 0.35
PDAP1-202ENST00000426447 LPXNO60711 386 aa17.26■□□□□ 0.35
PDAP1-202ENST00000426447 WDR5P61964 334 aaKnown RBP17.26■□□□□ 0.35
PDAP1-202ENST00000426447 RPS6P62753 249 aaKnown RBP17.26■□□□□ 0.35
PDAP1-202ENST00000426447 SPRED2Q7Z698 418 aa17.26■□□□□ 0.35
PDAP1-202ENST00000426447 TMCO2Q7Z6W1 182 aaPredicted RBP17.26■□□□□ 0.35
PDAP1-202ENST00000426447 DNERQ8NFT8 737 aa17.26■□□□□ 0.35
PDAP1-202ENST00000426447 CAGE1Q8TC20 777 aa17.26■□□□□ 0.35
PDAP1-202ENST00000426447 AFAP1L1Q8TED9 768 aa17.26■□□□□ 0.35
PDAP1-202ENST00000426447 GDPD5Q8WTR4 605 aa17.26■□□□□ 0.35
PDAP1-202ENST00000426447 CLEC4DQ8WXI8 215 aa17.26■□□□□ 0.35
PDAP1-202ENST00000426447 KHSRPQ92945 711 aaKnown RBP eCLIP17.26■□□□□ 0.35
PDAP1-202ENST00000426447 MTUS1Q9ULD2 1270 aa17.26■□□□□ 0.35
PDAP1-202ENST00000426447 LRRC37A2A6NM11 1700 aa17.26■□□□□ 0.35
PDAP1-202ENST00000426447 NCOR1O75376 2440 aa17.26■□□□□ 0.35
PDAP1-202ENST00000426447 TTC41PQ6P2S7 1318 aa17.25■□□□□ 0.35
PDAP1-202ENST00000426447 TOP1P11387 765 aaKnown RBP17.25■□□□□ 0.35
PDAP1-202ENST00000426447 SELPP16109 830 aa17.25■□□□□ 0.35
PDAP1-202ENST00000426447 RRP12Q5JTH9 1297 aaKnown RBP17.25■□□□□ 0.35
PDAP1-202ENST00000426447 TMEM47Q9BQJ4 181 aa17.25■□□□□ 0.35
PDAP1-202ENST00000426447 PI4K2BG5E9Z4 385 aa17.24■□□□□ 0.35
PDAP1-202ENST00000426447 PARNO95453 639 aaKnown RBP17.24■□□□□ 0.35
PDAP1-202ENST00000426447 C20orf194Q5TEA3 1177 aa17.24■□□□□ 0.35
PDAP1-202ENST00000426447 CNKSR3Q6P9H4 555 aa17.24■□□□□ 0.35
PDAP1-202ENST00000426447 LRRC8DQ7L1W4 858 aa17.24■□□□□ 0.35
PDAP1-202ENST00000426447 CHST3Q7LGC8 479 aa17.24■□□□□ 0.35
PDAP1-202ENST00000426447 AFG1LQ8WV93 481 aa17.24■□□□□ 0.35
PDAP1-202ENST00000426447 TGS1Q96RS0 853 aaKnown RBP17.24■□□□□ 0.35
PDAP1-202ENST00000426447 RAD9AQ99638 391 aa17.24■□□□□ 0.35
PDAP1-202ENST00000426447 ANAPC4Q9UJX5 808 aa17.24■□□□□ 0.35
PDAP1-202ENST00000426447 RCAN3Q9UKA8 241 aa17.24■□□□□ 0.35
PDAP1-202ENST00000426447 SCN5AQ14524 2016 aa17.24■□□□□ 0.35
PDAP1-202ENST00000426447 ORC4O43929 436 aa17.23■□□□□ 0.35
PDAP1-202ENST00000426447 CASTP20810 708 aaKnown RBP17.23■□□□□ 0.35
PDAP1-202ENST00000426447 EDNRBP24530 442 aa17.23■□□□□ 0.35
PDAP1-202ENST00000426447 NOVP48745 357 aa17.23■□□□□ 0.35
PDAP1-202ENST00000426447 DEFB103AP81534 67 aa17.23■□□□□ 0.35
PDAP1-202ENST00000426447 IKBKEQ14164 716 aa17.23■□□□□ 0.35
PDAP1-202ENST00000426447 GDF6Q6KF10 455 aaPredicted RBP17.23■□□□□ 0.35
PDAP1-202ENST00000426447 SEPT14Q6ZU15 432 aa17.23■□□□□ 0.35
PDAP1-202ENST00000426447 UBE2ZQ9H832 354 aaPredicted RBP17.23■□□□□ 0.35
PDAP1-202ENST00000426447 SUGCTQ9HAC7 445 aa17.23■□□□□ 0.35
PDAP1-202ENST00000426447 CD320Q9NPF0 282 aa17.23■□□□□ 0.35
PDAP1-202ENST00000426447 C11orf16Q9NQ32 467 aa17.23■□□□□ 0.35
PDAP1-202ENST00000426447 ABHD14A-ACY1A0A1B0GW23 586 aa17.22■□□□□ 0.35
PDAP1-202ENST00000426447 ARIH2O95376 493 aa17.22■□□□□ 0.35
PDAP1-202ENST00000426447 GJB5O95377 273 aa17.22■□□□□ 0.35
PDAP1-202ENST00000426447 GH1P01241 217 aa17.22■□□□□ 0.35
PDAP1-202ENST00000426447 SSTR3P32745 418 aaPredicted RBP17.22■□□□□ 0.35
PDAP1-202ENST00000426447 LY6KQ17RY6 165 aa17.22■□□□□ 0.35
PDAP1-202ENST00000426447 USH1GQ495M9 461 aa17.22■□□□□ 0.35
PDAP1-202ENST00000426447 FAM117BQ6P1L5 589 aa17.22■□□□□ 0.35
PDAP1-202ENST00000426447 MIER1Q8N108 512 aa17.22■□□□□ 0.35
PDAP1-202ENST00000426447 GJD3Q8N144 294 aa17.22■□□□□ 0.35
PDAP1-202ENST00000426447 C7orf31Q8N865 590 aa17.22■□□□□ 0.35
PDAP1-202ENST00000426447 PI4K2BQ8TCG2 481 aa17.22■□□□□ 0.35
PDAP1-202ENST00000426447 EFCAB14O75071 495 aa17.21■□□□□ 0.35
PDAP1-202ENST00000426447 MMP3P08254 477 aa17.21■□□□□ 0.35
PDAP1-202ENST00000426447 PDHBP11177 359 aa17.21■□□□□ 0.35
PDAP1-202ENST00000426447 CKBP12277 381 aa17.21■□□□□ 0.35
PDAP1-202ENST00000426447 KCNA5P22460 613 aa17.21■□□□□ 0.35
PDAP1-202ENST00000426447 ERVK-21P61565 698 aa17.21■□□□□ 0.35
PDAP1-202ENST00000426447 GPNMBQ14956 572 aa17.21■□□□□ 0.35
PDAP1-202ENST00000426447 VPS53Q5VIR6 699 aa17.21■□□□□ 0.35
PDAP1-202ENST00000426447 SESTD1Q86VW0 696 aa17.21■□□□□ 0.35
PDAP1-202ENST00000426447 UIMC1Q96RL1 719 aa17.21■□□□□ 0.35
PDAP1-202ENST00000426447 TCP11L1Q9NUJ3 509 aa17.21■□□□□ 0.35
PDAP1-202ENST00000426447 REV3LO60673 3130 aa17.21■□□□□ 0.34
PDAP1-202ENST00000426447 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.2■□□□□ 0.34
PDAP1-202ENST00000426447 LINC01553A4QN01 128 aa17.2■□□□□ 0.34
PDAP1-202ENST00000426447 FOXP2O15409 715 aa17.2■□□□□ 0.34
PDAP1-202ENST00000426447 NBNO60934 754 aa17.2■□□□□ 0.34
PDAP1-202ENST00000426447 ZNF543Q08ER8 600 aa17.2■□□□□ 0.34
PDAP1-202ENST00000426447 DGKDQ16760 1214 aa17.2■□□□□ 0.34
PDAP1-202ENST00000426447 LEXMQ3ZCV2 418 aa17.2■□□□□ 0.34
PDAP1-202ENST00000426447 CCDC62Q6P9F0 684 aa17.2■□□□□ 0.34
PDAP1-202ENST00000426447 ALYREFQ86V81 257 aaKnown RBP17.2■□□□□ 0.34
PDAP1-202ENST00000426447 FAM178BQ8IXR5 827 aa17.2■□□□□ 0.34
PDAP1-202ENST00000426447 RGS22Q8NE09 1264 aa17.2■□□□□ 0.34
PDAP1-202ENST00000426447 ALG1Q9BT22 464 aa17.2■□□□□ 0.34
PDAP1-202ENST00000426447 WDR19Q8NEZ3 1342 aa17.2■□□□□ 0.34
PDAP1-202ENST00000426447 PRR33A8MZF0 331 aa17.19■□□□□ 0.34
PDAP1-202ENST00000426447 CXCL10P02778 98 aa17.19■□□□□ 0.34
PDAP1-202ENST00000426447 FGRP09769 529 aa17.19■□□□□ 0.34
PDAP1-202ENST00000426447 STXBP2Q15833 593 aa17.19■□□□□ 0.34
PDAP1-202ENST00000426447 CSPP1Q1MSJ5 1256 aa17.19■□□□□ 0.34
PDAP1-202ENST00000426447 OTUD7AQ8TE49 926 aaPredicted RBP17.19■□□□□ 0.34
PDAP1-202ENST00000426447 NSUN6Q8TEA1 469 aaKnown RBP17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms