RNA–Protein interactions for RNA: ENST00000426431.2

SP1-202, Transcript of Sp1 transcription factor, humanhuman

TSL 1 (best) BASIC

Gene SP1, Length 7,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP1-202ENST00000426431 USP17L2Q6R6M4 530 aa11.15□□□□□ -0.62
SP1-202ENST00000426431 C10orf67Q8IYJ2 551 aa11.15□□□□□ -0.62
SP1-202ENST00000426431 GPKOWQ92917 476 aaPredicted RBP eCLIP11.15□□□□□ -0.62
SP1-202ENST00000426431 PAIP2Q9BPZ3 127 aaKnown RBP11.15□□□□□ -0.62
SP1-202ENST00000426431 DONSONQ9NYP3 566 aa11.15□□□□□ -0.62
SP1-202ENST00000426431 SLC26A4O43511 780 aa11.15□□□□□ -0.62
SP1-202ENST00000426431 MED7O43513 233 aa11.15□□□□□ -0.62
SP1-202ENST00000426431 FKBP3Q00688 224 aaKnown RBP11.15□□□□□ -0.62
SP1-202ENST00000426431 WHAMMP3Q1A5X7 153 aa11.15□□□□□ -0.62
SP1-202ENST00000426431 NBPF11Q86T75 865 aa11.15□□□□□ -0.62
SP1-202ENST00000426431 NSUN7Q8NE18 718 aaKnown RBP11.15□□□□□ -0.62
SP1-202ENST00000426431 FAM76AQ8TAV0 307 aa11.15□□□□□ -0.62
SP1-202ENST00000426431 TYW1Q9NV66 732 aaKnown RBP11.15□□□□□ -0.62
SP1-202ENST00000426431 TBC1D7Q9P0N9 293 aa11.15□□□□□ -0.62
SP1-202ENST00000426431 MROH7-TTC4A0A0A0MT08 1334 aa11.15□□□□□ -0.62
SP1-202ENST00000426431 HMGB1P1B2RPK0 211 aaPredicted RBP11.15□□□□□ -0.62
SP1-202ENST00000426431 CAPN9O14815 690 aa11.15□□□□□ -0.62
SP1-202ENST00000426431 RNF8O76064 485 aa11.15□□□□□ -0.62
SP1-202ENST00000426431 ZSCAN20P17040 1043 aaPredicted RBP11.15□□□□□ -0.62
SP1-202ENST00000426431 TXNRD1Q16881 649 aa11.15□□□□□ -0.62
SP1-202ENST00000426431 SYMPKQ92797 1274 aaKnown RBP11.15□□□□□ -0.62
SP1-202ENST00000426431 MED10Q9BTT4 135 aa11.15□□□□□ -0.62
SP1-202ENST00000426431 KIAA1586Q9HCI6 787 aa11.15□□□□□ -0.62
SP1-202ENST00000426431 SEPT9Q9UHD8 586 aaPredicted RBP11.15□□□□□ -0.62
SP1-202ENST00000426431 HNRNPDLO14979 420 aaKnown RBP11.15□□□□□ -0.63
SP1-202ENST00000426431 LDHAP00338 332 aaKnown RBP11.15□□□□□ -0.63
SP1-202ENST00000426431 TCP1P17987 556 aaKnown RBP11.15□□□□□ -0.63
SP1-202ENST00000426431 KCNV1Q6PIU1 500 aa11.15□□□□□ -0.63
SP1-202ENST00000426431 TRIM50Q86XT4 487 aa11.15□□□□□ -0.63
SP1-202ENST00000426431 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.15□□□□□ -0.63
SP1-202ENST00000426431 SUGCTQ9HAC7 445 aa11.15□□□□□ -0.63
SP1-202ENST00000426431 TBC1D22BQ9NU19 505 aa11.15□□□□□ -0.63
SP1-202ENST00000426431 PCDHA7Q9UN72 937 aa11.15□□□□□ -0.63
SP1-202ENST00000426431 KIAA1024Q9UPX6 916 aa11.15□□□□□ -0.63
SP1-202ENST00000426431 UTYO14607 1347 aa11.15□□□□□ -0.63
SP1-202ENST00000426431 CCDC25Q86WR0 208 aa11.14□□□□□ -0.63
SP1-202ENST00000426431 PLCD4Q9BRC7 762 aa11.14□□□□□ -0.63
SP1-202ENST00000426431 MYO1AQ9UBC5 1043 aa11.14□□□□□ -0.63
SP1-202ENST00000426431 ASIC3Q9UHC3 531 aa11.14□□□□□ -0.63
SP1-202ENST00000426431 PALD1Q9ULE6 856 aa11.14□□□□□ -0.63
SP1-202ENST00000426431 GRIN3BO60391 1043 aa11.14□□□□□ -0.63
SP1-202ENST00000426431 SLFN14P0C7P3 912 aa11.14□□□□□ -0.63
SP1-202ENST00000426431 GOLGA8HP0CJ92 632 aa11.14□□□□□ -0.63
SP1-202ENST00000426431 LACTBP83111 547 aaPredicted RBP11.14□□□□□ -0.63
SP1-202ENST00000426431 PHBP35232 272 aa11.14□□□□□ -0.63
SP1-202ENST00000426431 MCPH1Q8NEM0 835 aa11.14□□□□□ -0.63
SP1-202ENST00000426431 SLF1Q9BQI6 1058 aa11.14□□□□□ -0.63
SP1-202ENST00000426431 KRT10P13645 584 aa11.14□□□□□ -0.63
SP1-202ENST00000426431 PNOCQ13519 176 aa11.14□□□□□ -0.63
SP1-202ENST00000426431 UTP14CQ5TAP6 766 aaKnown RBP11.14□□□□□ -0.63
SP1-202ENST00000426431 FASTKD5Q7L8L6 764 aaKnown RBP11.14□□□□□ -0.63
SP1-202ENST00000426431 EXOC3L4Q17RC7 722 aa11.14□□□□□ -0.63
SP1-202ENST00000426431 TTC39CQ8N584 583 aa11.14□□□□□ -0.63
SP1-202ENST00000426431 GIMAP7Q8NHV1 300 aa11.14□□□□□ -0.63
SP1-202ENST00000426431 ATRIPQ8WXE1 791 aa11.14□□□□□ -0.63
SP1-202ENST00000426431 OSBP2Q969R2 916 aa11.14□□□□□ -0.63
SP1-202ENST00000426431 PSMD1Q99460 953 aa11.14□□□□□ -0.63
SP1-202ENST00000426431 SELENOSQ9BQE4 189 aa11.14□□□□□ -0.63
SP1-202ENST00000426431 KMT5AQ9NQR1 393 aa11.14□□□□□ -0.63
SP1-202ENST00000426431 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.14□□□□□ -0.633e-7■■■□□ 16.2
SP1-202ENST00000426431 hCG_1642624A0A1W2PR95 340 aa11.14□□□□□ -0.63
SP1-202ENST00000426431 ECE2O60344 883 aa11.14□□□□□ -0.63
SP1-202ENST00000426431 H2AFZP0C0S5 128 aa11.14□□□□□ -0.63
SP1-202ENST00000426431 DYNLL1P63167 89 aaKnown RBP11.14□□□□□ -0.63
SP1-202ENST00000426431 H2AFVQ71UI9 128 aa11.14□□□□□ -0.63
SP1-202ENST00000426431 ARHGEF1Q92888 912 aaKnown RBP11.14□□□□□ -0.63
SP1-202ENST00000426431 CRCPO75575 148 aa11.13□□□□□ -0.63
SP1-202ENST00000426431 MYO1EQ12965 1108 aa11.13□□□□□ -0.63
SP1-202ENST00000426431 CPLX4Q7Z7G2 160 aa11.13□□□□□ -0.63
SP1-202ENST00000426431 UBLCP1Q8WVY7 318 aaPredicted RBP11.13□□□□□ -0.63
SP1-202ENST00000426431 BLZF1Q9H2G9 400 aa11.13□□□□□ -0.63
SP1-202ENST00000426431 LRFN2Q9ULH4 789 aa11.13□□□□□ -0.63
SP1-202ENST00000426431 CYP2E1P05181 493 aaPredicted RBP11.13□□□□□ -0.63
SP1-202ENST00000426431 NSFP46459 744 aaKnown RBP11.13□□□□□ -0.63
SP1-202ENST00000426431 FAM20AQ96MK3 541 aa11.13□□□□□ -0.63
SP1-202ENST00000426431 NUB1Q9Y5A7 615 aa11.13□□□□□ -0.63
SP1-202ENST00000426431 PNPLA7Q6ZV29 1317 aa11.13□□□□□ -0.63
SP1-202ENST00000426431 TECPR2O15040 1411 aa11.13□□□□□ -0.63
SP1-202ENST00000426431 REREQ9P2R6 1566 aa11.13□□□□□ -0.63
SP1-202ENST00000426431 EBAG9O00559 213 aa11.13□□□□□ -0.63
SP1-202ENST00000426431 CDC25BP30305 580 aa11.13□□□□□ -0.63
SP1-202ENST00000426431 SFNP31947 248 aa11.13□□□□□ -0.63
SP1-202ENST00000426431 LRRC63Q05C16 580 aa11.13□□□□□ -0.63
SP1-202ENST00000426431 KRT81Q14533 505 aa11.13□□□□□ -0.63
SP1-202ENST00000426431 TBCKQ8TEA7 893 aa11.13□□□□□ -0.63
SP1-202ENST00000426431 ZNF512BQ96KM6 892 aaPredicted RBP11.13□□□□□ -0.63
SP1-202ENST00000426431 SPON1Q9HCB6 807 aa11.13□□□□□ -0.63
SP1-202ENST00000426431 IPO11Q9UI26 975 aaKnown RBP11.13□□□□□ -0.63
SP1-202ENST00000426431 SRPRBQ9Y5M8 271 aaKnown RBP11.13□□□□□ -0.63
SP1-202ENST00000426431 CEP104O60308 925 aa11.13□□□□□ -0.63
SP1-202ENST00000426431 PIK3CAP42336 1068 aa11.13□□□□□ -0.63
SP1-202ENST00000426431 MYL7Q01449 175 aa11.13□□□□□ -0.63
SP1-202ENST00000426431 RINT1Q6NUQ1 792 aa11.13□□□□□ -0.63
SP1-202ENST00000426431 CCDC121Q6ZUS5 278 aa11.13□□□□□ -0.63
SP1-202ENST00000426431 PARVGQ9HBI0 331 aa11.13□□□□□ -0.63
SP1-202ENST00000426431 RCOR1Q9UKL0 485 aa11.13□□□□□ -0.63
SP1-202ENST00000426431 NOC2LQ9Y3T9 749 aaKnown RBP11.13□□□□□ -0.63
SP1-202ENST00000426431 ERICH4A6NGS2 130 aa11.13□□□□□ -0.63
SP1-202ENST00000426431 RGL2O15211 777 aa11.13□□□□□ -0.63
SP1-202ENST00000426431 TERF1P54274 439 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms