RNA–Protein interactions for RNA: ENST00000426253.5

NIF3L1-207, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-207ENST00000426253 COL1A1P02452 1464 aaPredicted RBP7.59□□□□□ -1.19
NIF3L1-207ENST00000426253 PSME4Q14997 1843 aa7.59□□□□□ -1.19
NIF3L1-207ENST00000426253 BDP1A6H8Y1 2624 aa7.59□□□□□ -1.19
NIF3L1-207ENST00000426253 CLRN2A0PK11 232 aa7.58□□□□□ -1.2
NIF3L1-207ENST00000426253 SMIM22K7EJ46 135 aa7.58□□□□□ -1.2
NIF3L1-207ENST00000426253 EREGO14944 169 aa7.58□□□□□ -1.2
NIF3L1-207ENST00000426253 MAP3K6O95382 1288 aa7.58□□□□□ -1.2
NIF3L1-207ENST00000426253 EIF4BP23588 611 aaKnown RBP7.58□□□□□ -1.2
NIF3L1-207ENST00000426253 CRKP46108 304 aa7.58□□□□□ -1.2
NIF3L1-207ENST00000426253 FCGRTP55899 365 aa7.58□□□□□ -1.2
NIF3L1-207ENST00000426253 SMAD3P84022 425 aaKnown RBP7.58□□□□□ -1.2
NIF3L1-207ENST00000426253 ATP8B2P98198 1209 aa7.58□□□□□ -1.2
NIF3L1-207ENST00000426253 HDLBPQ00341 1268 aaKnown RBP7.58□□□□□ -1.2
NIF3L1-207ENST00000426253 TFCP2Q12800 502 aa7.58□□□□□ -1.2
NIF3L1-207ENST00000426253 MTX1Q13505 466 aa7.58□□□□□ -1.2
NIF3L1-207ENST00000426253 GRIN2CQ14957 1233 aa7.58□□□□□ -1.2
NIF3L1-207ENST00000426253 CCDC85BQ15834 202 aaPredicted RBP7.58□□□□□ -1.2
NIF3L1-207ENST00000426253 GRIK5Q16478 980 aa7.58□□□□□ -1.2
NIF3L1-207ENST00000426253 WDR66Q8TBY9 1149 aa7.58□□□□□ -1.2
NIF3L1-207ENST00000426253 EPS8L3Q8TE67 593 aaKnown RBP7.58□□□□□ -1.2
NIF3L1-207ENST00000426253 NEUROD6Q96NK8 337 aa7.58□□□□□ -1.2
NIF3L1-207ENST00000426253 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.58□□□□□ -1.2
NIF3L1-207ENST00000426253 TDRD3Q9H7E2 651 aaKnown RBP7.58□□□□□ -1.2
NIF3L1-207ENST00000426253 VEZTQ9HBM0 779 aa7.58□□□□□ -1.2
NIF3L1-207ENST00000426253 ZNF70Q9UC06 446 aaPredicted RBP7.58□□□□□ -1.2
NIF3L1-207ENST00000426253 HCN2Q9UL51 889 aa7.58□□□□□ -1.2
NIF3L1-207ENST00000426253 GABRQQ9UN88 632 aa7.58□□□□□ -1.2
NIF3L1-207ENST00000426253 AKAP2Q9Y2D5 859 aa7.58□□□□□ -1.2
NIF3L1-207ENST00000426253 OTOFQ9HC10 1997 aa7.58□□□□□ -1.2
NIF3L1-207ENST00000426253 PNMA6EA0A0J9YXQ4 647 aa7.57□□□□□ -1.2
NIF3L1-207ENST00000426253 MMP20O60882 483 aa7.57□□□□□ -1.2
NIF3L1-207ENST00000426253 USP2O75604 605 aaPredicted RBP7.57□□□□□ -1.2
NIF3L1-207ENST00000426253 RARAP10276 462 aa7.57□□□□□ -1.2
NIF3L1-207ENST00000426253 SOX18P35713 384 aa7.57□□□□□ -1.2
NIF3L1-207ENST00000426253 SPEM2Q0P670 501 aa7.57□□□□□ -1.2
NIF3L1-207ENST00000426253 PDE3AQ14432 1141 aa7.57□□□□□ -1.2
NIF3L1-207ENST00000426253 RASA3Q14644 834 aa7.57□□□□□ -1.2
NIF3L1-207ENST00000426253 SHHQ15465 462 aa7.57□□□□□ -1.2
NIF3L1-207ENST00000426253 KIAA0319Q5VV43 1072 aa7.57□□□□□ -1.2
NIF3L1-207ENST00000426253 FOXR1Q6PIV2 292 aa7.57□□□□□ -1.2
NIF3L1-207ENST00000426253 C17orf99Q6UX52 265 aa7.57□□□□□ -1.2
NIF3L1-207ENST00000426253 ITPRIPQ8IWB1 547 aa7.57□□□□□ -1.2
NIF3L1-207ENST00000426253 TEKT1Q969V4 418 aa7.57□□□□□ -1.2
NIF3L1-207ENST00000426253 PNMA5Q96PV4 448 aa7.57□□□□□ -1.2
NIF3L1-207ENST00000426253 UIMC1Q96RL1 719 aa7.57□□□□□ -1.2
NIF3L1-207ENST00000426253 OSBPL7Q9BZF2 842 aa7.57□□□□□ -1.2
NIF3L1-207ENST00000426253 C12orf49Q9H741 205 aa7.57□□□□□ -1.2
NIF3L1-207ENST00000426253 TLR7Q9NYK1 1049 aaKnown RBP7.57□□□□□ -1.2
NIF3L1-207ENST00000426253 ZFATQ9P243 1243 aa7.57□□□□□ -1.2
NIF3L1-207ENST00000426253 SALL4Q9UJQ4 1053 aa7.57□□□□□ -1.2
NIF3L1-207ENST00000426253 DENND2AQ9ULE3 1009 aa7.57□□□□□ -1.2
NIF3L1-207ENST00000426253 SUGT1Q9Y2Z0 365 aa7.57□□□□□ -1.2
NIF3L1-207ENST00000426253 PPP2R3BQ9Y5P8 575 aa7.57□□□□□ -1.2
NIF3L1-207ENST00000426253 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.57□□□□□ -1.2
NIF3L1-207ENST00000426253 AOX1Q06278 1338 aa7.56□□□□□ -1.2
NIF3L1-207ENST00000426253 A0A1B0GUL7 405 aa7.56□□□□□ -1.2
NIF3L1-207ENST00000426253 TCP10L2B9ZVM9 353 aa7.56□□□□□ -1.2
NIF3L1-207ENST00000426253 BTBD19C9JJ37 291 aa7.56□□□□□ -1.2
NIF3L1-207ENST00000426253 SURF6O75683 361 aaKnown RBP7.56□□□□□ -1.2
NIF3L1-207ENST00000426253 POLR3DP05423 398 aaPredicted RBP7.56□□□□□ -1.2
NIF3L1-207ENST00000426253 CETPP11597 493 aa7.56□□□□□ -1.2
NIF3L1-207ENST00000426253 RLBP1P12271 317 aa7.56□□□□□ -1.2
NIF3L1-207ENST00000426253 HOXD8P13378 290 aaPredicted RBP7.56□□□□□ -1.2
NIF3L1-207ENST00000426253 EDN3P14138 238 aa7.56□□□□□ -1.2
NIF3L1-207ENST00000426253 SNRPBP14678 240 aaKnown RBP7.56□□□□□ -1.2
NIF3L1-207ENST00000426253 ADORA1P30542 326 aa7.56□□□□□ -1.2
NIF3L1-207ENST00000426253 PHKA1P46020 1223 aa7.56□□□□□ -1.2
NIF3L1-207ENST00000426253 TNNI2P48788 182 aa7.56□□□□□ -1.2
NIF3L1-207ENST00000426253 TNFAIP1Q13829 316 aa7.56□□□□□ -1.2
NIF3L1-207ENST00000426253 GORABQ5T7V8 394 aa7.56□□□□□ -1.2
NIF3L1-207ENST00000426253 NBPF12Q5TAG4 269 aaPredicted RBP7.56□□□□□ -1.2
NIF3L1-207ENST00000426253 HHIPL2Q6UWX4 724 aa7.56□□□□□ -1.2
NIF3L1-207ENST00000426253 PANK1Q8TE04 598 aa7.56□□□□□ -1.2
NIF3L1-207ENST00000426253 SSH3Q8TE77 659 aa7.56□□□□□ -1.2
NIF3L1-207ENST00000426253 GTPBP3Q969Y2 492 aaKnown RBP7.56□□□□□ -1.2
NIF3L1-207ENST00000426253 ABHD17AQ96GS6 310 aa7.56□□□□□ -1.2
NIF3L1-207ENST00000426253 CRELD1Q96HD1 420 aa7.56□□□□□ -1.2
NIF3L1-207ENST00000426253 NPHS2Q9NP85 383 aa7.56□□□□□ -1.2
NIF3L1-207ENST00000426253 PPP4R2Q9NY27 417 aa7.56□□□□□ -1.2
NIF3L1-207ENST00000426253 PRKAG2Q9UGJ0 569 aa7.56□□□□□ -1.2
NIF3L1-207ENST00000426253 MAST3O60307 1309 aa7.55□□□□□ -1.2
NIF3L1-207ENST00000426253 PHF20L1A8MW92 1017 aa7.55□□□□□ -1.2
NIF3L1-207ENST00000426253 PPFIA3O75145 1194 aa7.55□□□□□ -1.2
NIF3L1-207ENST00000426253 PSAPP07602 524 aa7.55□□□□□ -1.2
NIF3L1-207ENST00000426253 CTSHP09668 335 aa7.55□□□□□ -1.2
NIF3L1-207ENST00000426253 IRS1P35568 1242 aa7.55□□□□□ -1.2
NIF3L1-207ENST00000426253 FLT3LGP49771 235 aa7.55□□□□□ -1.2
NIF3L1-207ENST00000426253 OS9Q13438 667 aaPredicted RBP7.55□□□□□ -1.2
NIF3L1-207ENST00000426253 MVPQ14764 893 aaKnown RBP7.55□□□□□ -1.2
NIF3L1-207ENST00000426253 C9orf50Q5SZB4 431 aa7.55□□□□□ -1.2
NIF3L1-207ENST00000426253 APOBEC3HQ6NTF7 200 aaKnown RBP7.55□□□□□ -1.2
NIF3L1-207ENST00000426253 PI16Q6UXB8 463 aa7.55□□□□□ -1.2
NIF3L1-207ENST00000426253 KRT25Q7Z3Z0 450 aa7.55□□□□□ -1.2
NIF3L1-207ENST00000426253 NANOS1Q8WY41 292 aaKnown RBP7.55□□□□□ -1.2
NIF3L1-207ENST00000426253 ZDHHC15Q96MV8 337 aa7.55□□□□□ -1.2
NIF3L1-207ENST00000426253 TRERF1Q96PN7 1200 aa7.55□□□□□ -1.2
NIF3L1-207ENST00000426253 SLC30A3Q99726 388 aa7.55□□□□□ -1.2
NIF3L1-207ENST00000426253 SUV39H2Q9H5I1 410 aa7.55□□□□□ -1.2
NIF3L1-207ENST00000426253 ZCCHC17Q9NP64 241 aaKnown RBP7.55□□□□□ -1.2
NIF3L1-207ENST00000426253 FAM8A1Q9UBU6 413 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms