RNA–Protein interactions for RNA: ENST00000425967.7

FGFR1-211, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best) BASIC

Gene FGFR1, Length 5,375 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-211ENST00000425967 DPH5Q9H2P9 285 aa13.77□□□□□ -0.21
FGFR1-211ENST00000425967 KANSL2Q9H9L4 492 aa13.77□□□□□ -0.21
FGFR1-211ENST00000425967 SRGAP2BP0DMP2 458 aa13.77□□□□□ -0.21
FGFR1-211ENST00000425967 ZNF827Q17R98 1081 aa13.77□□□□□ -0.21
FGFR1-211ENST00000425967 LARP4BQ92615 738 aaKnown RBP13.77□□□□□ -0.21
FGFR1-211ENST00000425967 GDAP1L1Q96MZ0 367 aa13.77□□□□□ -0.21
FGFR1-211ENST00000425967 DESI2Q9BSY9 194 aa13.77□□□□□ -0.21
FGFR1-211ENST00000425967 DNMT1P26358 1616 aaKnown RBP13.77□□□□□ -0.21
FGFR1-211ENST00000425967 CLRN2A0PK11 232 aa13.77□□□□□ -0.21
FGFR1-211ENST00000425967 GCFC2P16383 781 aaKnown RBP13.77□□□□□ -0.21
FGFR1-211ENST00000425967 GABPB1Q06547 395 aaPredicted RBP13.77□□□□□ -0.21
FGFR1-211ENST00000425967 PHLDB3Q6NSJ2 640 aa13.77□□□□□ -0.21
FGFR1-211ENST00000425967 CLIC6Q96NY7 704 aa13.77□□□□□ -0.21
FGFR1-211ENST00000425967 RNF26Q9BY78 433 aaPredicted RBP13.77□□□□□ -0.21
FGFR1-211ENST00000425967 QTRT2Q9H974 415 aaKnown RBP13.77□□□□□ -0.21
FGFR1-211ENST00000425967 FANCLQ9NW38 375 aa13.77□□□□□ -0.21
FGFR1-211ENST00000425967 LRFN2Q9ULH4 789 aa13.77□□□□□ -0.21
FGFR1-211ENST00000425967 MAD1L1Q9Y6D9 718 aa13.77□□□□□ -0.21
FGFR1-211ENST00000425967 KAZNQ674X7 775 aa13.76□□□□□ -0.21
FGFR1-211ENST00000425967 PPP1R2P3Q6NXS1 205 aa13.76□□□□□ -0.21
FGFR1-211ENST00000425967 FOXP1Q9H334 677 aaPredicted RBP13.76□□□□□ -0.21
FGFR1-211ENST00000425967 PSMC2P35998 433 aaKnown RBP13.76□□□□□ -0.21
FGFR1-211ENST00000425967 FAM196AQ6ZSG2 479 aa13.76□□□□□ -0.21
FGFR1-211ENST00000425967 SPICE1Q8N0Z3 855 aa13.76□□□□□ -0.21
FGFR1-211ENST00000425967 ACCSQ96QU6 501 aa13.76□□□□□ -0.21
FGFR1-211ENST00000425967 STK17AQ9UEE5 414 aa13.76□□□□□ -0.21
FGFR1-211ENST00000425967 CACTINQ8WUQ7 758 aaKnown RBP13.76□□□□□ -0.21
FGFR1-211ENST00000425967 GSDMAQ96QA5 445 aa13.76□□□□□ -0.21
FGFR1-211ENST00000425967 SNX25Q9H3E2 840 aa13.76□□□□□ -0.21
FGFR1-211ENST00000425967 EFCC1Q9HA90 598 aa13.76□□□□□ -0.21
FGFR1-211ENST00000425967 BCL2L12Q9HB09 334 aa13.76□□□□□ -0.21
FGFR1-211ENST00000425967 INO80B-WBP1J3KQ70 363 aa13.76□□□□□ -0.21
FGFR1-211ENST00000425967 ZNF853P0CG23 659 aa13.76□□□□□ -0.21
FGFR1-211ENST00000425967 SAT1P21673 171 aa13.76□□□□□ -0.21
FGFR1-211ENST00000425967 RFC1P35251 1148 aaPredicted RBP13.76□□□□□ -0.21
FGFR1-211ENST00000425967 COPB1P53618 953 aaKnown RBP13.76□□□□□ -0.21
FGFR1-211ENST00000425967 JADE1Q6IE81 842 aa13.76□□□□□ -0.21
FGFR1-211ENST00000425967 CAPN12Q6ZSI9 719 aa13.76□□□□□ -0.21
FGFR1-211ENST00000425967 FBXO18Q8NFZ0 1043 aa13.76□□□□□ -0.21
FGFR1-211ENST00000425967 CHAMP1Q96JM3 812 aa13.76□□□□□ -0.21
FGFR1-211ENST00000425967 INO80BQ9C086 356 aaPredicted RBP13.76□□□□□ -0.21
FGFR1-211ENST00000425967 SERPINB2P05120 415 aa13.75□□□□□ -0.21
FGFR1-211ENST00000425967 CLNS1AP54105 237 aaKnown RBP13.75□□□□□ -0.21
FGFR1-211ENST00000425967 DBN1Q16643 649 aa13.75□□□□□ -0.21
FGFR1-211ENST00000425967 HDAC11Q96DB2 347 aa13.75□□□□□ -0.21
FGFR1-211ENST00000425967 CNOT6LQ96LI5 555 aaKnown RBP13.75□□□□□ -0.21
FGFR1-211ENST00000425967 ECE1P42892 770 aa13.75□□□□□ -0.21
FGFR1-211ENST00000425967 SF3A3Q12874 501 aaKnown RBP eCLIP13.75□□□□□ -0.212e-6■■■□□ 17.2
FGFR1-211ENST00000425967 ZMYM1Q5SVZ6 1142 aa13.75□□□□□ -0.21
FGFR1-211ENST00000425967 ARMC9Q7Z3E5 817 aa13.75□□□□□ -0.21
FGFR1-211ENST00000425967 RFX6Q8HWS3 928 aa13.75□□□□□ -0.21
FGFR1-211ENST00000425967 GPT2Q8TD30 523 aa13.75□□□□□ -0.21
FGFR1-211ENST00000425967 KMT5AQ9NQR1 393 aa13.75□□□□□ -0.21
FGFR1-211ENST00000425967 EPN1Q9Y6I3 576 aaPredicted RBP13.75□□□□□ -0.21
FGFR1-211ENST00000425967 A0A1W2PQ27 194 aa13.75□□□□□ -0.21
FGFR1-211ENST00000425967 A0A1W2PQ64 194 aa13.75□□□□□ -0.21
FGFR1-211ENST00000425967 A0A1W2PQD8 194 aa13.75□□□□□ -0.21
FGFR1-211ENST00000425967 ARHGEF37A1IGU5 675 aa13.75□□□□□ -0.21
FGFR1-211ENST00000425967 YWHAGP61981 247 aaKnown RBP eCLIP13.75□□□□□ -0.21
FGFR1-211ENST00000425967 CCDC93Q567U6 631 aa13.75□□□□□ -0.21
FGFR1-211ENST00000425967 NR2F2P24468 414 aa13.75□□□□□ -0.21
FGFR1-211ENST00000425967 CCND2P30279 289 aa13.75□□□□□ -0.21
FGFR1-211ENST00000425967 MRFAP1L1Q96HT8 127 aa13.75□□□□□ -0.21
FGFR1-211ENST00000425967 DHTKD1Q96HY7 919 aaPredicted RBP13.75□□□□□ -0.21
FGFR1-211ENST00000425967 SLC12A6Q9UHW9 1150 aa13.75□□□□□ -0.21
FGFR1-211ENST00000425967 MLH3Q9UHC1 1453 aa13.75□□□□□ -0.21
FGFR1-211ENST00000425967 FMNL1O95466 1100 aaPredicted RBP13.74□□□□□ -0.21
FGFR1-211ENST00000425967 NDUFA8P51970 172 aa13.74□□□□□ -0.21
FGFR1-211ENST00000425967 PTPROQ16827 1216 aa13.74□□□□□ -0.21
FGFR1-211ENST00000425967 TTBK2Q6IQ55 1244 aa13.74□□□□□ -0.21
FGFR1-211ENST00000425967 DHX36Q9H2U1 1008 aaKnown RBP13.74□□□□□ -0.21
FGFR1-211ENST00000425967 ZNF233A6NK53 670 aa13.74□□□□□ -0.21
FGFR1-211ENST00000425967 ZNF449Q6P9G9 518 aa13.74□□□□□ -0.21
FGFR1-211ENST00000425967 ADAT2Q7Z6V5 191 aaKnown RBP13.74□□□□□ -0.21
FGFR1-211ENST00000425967 TUBGCP2Q9BSJ2 902 aa13.74□□□□□ -0.21
FGFR1-211ENST00000425967 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.74□□□□□ -0.21
FGFR1-211ENST00000425967 CLIC4Q9Y696 253 aa13.74□□□□□ -0.21
FGFR1-211ENST00000425967 PPP6R2O75170 966 aa13.74□□□□□ -0.21
FGFR1-211ENST00000425967 GPC4O75487 556 aa13.74□□□□□ -0.21
FGFR1-211ENST00000425967 ZSCAN20P17040 1043 aaPredicted RBP13.74□□□□□ -0.21
FGFR1-211ENST00000425967 ADORA1P30542 326 aa13.74□□□□□ -0.21
FGFR1-211ENST00000425967 TMEM206Q9H813 350 aa13.74□□□□□ -0.21
FGFR1-211ENST00000425967 BMP3P12645 472 aa13.74□□□□□ -0.21
FGFR1-211ENST00000425967 KRT10P13645 584 aa13.74□□□□□ -0.21
FGFR1-211ENST00000425967 PDE1BQ01064 536 aa13.74□□□□□ -0.21
FGFR1-211ENST00000425967 PUS3Q9BZE2 481 aaKnown RBP13.74□□□□□ -0.21
FGFR1-211ENST00000425967 PRKAG2Q9UGJ0 569 aa13.74□□□□□ -0.21
FGFR1-211ENST00000425967 MYOM2P54296 1465 aa13.74□□□□□ -0.21
FGFR1-211ENST00000425967 GNGT1P63211 74 aa13.73□□□□□ -0.21
FGFR1-211ENST00000425967 SCRN1Q12765 414 aa13.73□□□□□ -0.21
FGFR1-211ENST00000425967 TSTA3Q13630 321 aaPredicted RBP13.73□□□□□ -0.21
FGFR1-211ENST00000425967 RAB44Q7Z6P3 723 aaPredicted RBP13.73□□□□□ -0.21
FGFR1-211ENST00000425967 MAP4K1Q92918 833 aa13.73□□□□□ -0.21
FGFR1-211ENST00000425967 FAM149B1Q96BN6 582 aa13.73□□□□□ -0.21
FGFR1-211ENST00000425967 BAIAP2L1Q9UHR4 511 aa13.73□□□□□ -0.21
FGFR1-211ENST00000425967 STK38LQ9Y2H1 464 aa13.73□□□□□ -0.21
FGFR1-211ENST00000425967 AFPP02771 609 aaKnown RBP13.73□□□□□ -0.21
FGFR1-211ENST00000425967 UBXN2AP68543 259 aa13.73□□□□□ -0.21
FGFR1-211ENST00000425967 RNASELQ05823 741 aaKnown RBP13.73□□□□□ -0.21
FGFR1-211ENST00000425967 MESDQ14696 234 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms