RNA–Protein interactions for RNA: ENST00000425804.1

R3HDM1-205, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-205ENST00000425804 RGS22Q8NE09 1264 aa4.41□□□□□ -1.7
R3HDM1-205ENST00000425804 EXTL1Q92935 676 aa4.41□□□□□ -1.7
R3HDM1-205ENST00000425804 YTHDC1Q96MU7 727 aaKnown RBP4.41□□□□□ -1.7
R3HDM1-205ENST00000425804 TMEM168Q9H0V1 697 aa4.41□□□□□ -1.7
R3HDM1-205ENST00000425804 SIT1Q9Y3P8 196 aa4.41□□□□□ -1.7
R3HDM1-205ENST00000425804 DMRT1Q9Y5R6 373 aa4.41□□□□□ -1.7
R3HDM1-205ENST00000425804 RANGAP1P46060 587 aaPredicted RBP4.4□□□□□ -1.71
R3HDM1-205ENST00000425804 PCSK4Q6UW60 755 aa4.4□□□□□ -1.71
R3HDM1-205ENST00000425804 MRGPRGQ86SM5 289 aa4.4□□□□□ -1.71
R3HDM1-205ENST00000425804 NOC4LQ9BVI4 516 aaKnown RBP4.4□□□□□ -1.71
R3HDM1-205ENST00000425804 L2HGDHQ9H9P8 463 aa4.4□□□□□ -1.71
R3HDM1-205ENST00000425804 PLSCR1O15162 318 aa4.39□□□□□ -1.71
R3HDM1-205ENST00000425804 FOXS1O43638 330 aa4.39□□□□□ -1.71
R3HDM1-205ENST00000425804 CCNFP41002 786 aa4.39□□□□□ -1.71
R3HDM1-205ENST00000425804 MPP2Q14168 576 aa4.39□□□□□ -1.71
R3HDM1-205ENST00000425804 WWC2Q6AWC2 1192 aa4.39□□□□□ -1.71
R3HDM1-205ENST00000425804 FBXO27Q8NI29 283 aa4.39□□□□□ -1.71
R3HDM1-205ENST00000425804 SLC6A18Q96N87 628 aa4.39□□□□□ -1.71
R3HDM1-205ENST00000425804 FCRL3Q96P31 734 aaPredicted RBP4.39□□□□□ -1.71
R3HDM1-205ENST00000425804 CNNM2Q9H8M5 875 aa4.39□□□□□ -1.71
R3HDM1-205ENST00000425804 SHOXO15266 292 aa4.38□□□□□ -1.71
R3HDM1-205ENST00000425804 PPP1R11O60927 126 aaPredicted RBP4.38□□□□□ -1.71
R3HDM1-205ENST00000425804 IFNGR1P15260 489 aa4.38□□□□□ -1.71
R3HDM1-205ENST00000425804 FBLP22087 321 aaKnown RBP4.38□□□□□ -1.71
R3HDM1-205ENST00000425804 IL13P35225 146 aa4.38□□□□□ -1.71
R3HDM1-205ENST00000425804 NOP2P46087 812 aaKnown RBP4.38□□□□□ -1.71
R3HDM1-205ENST00000425804 TCTN3Q6NUS6 607 aa4.38□□□□□ -1.71
R3HDM1-205ENST00000425804 MIB1Q86YT6 1006 aa4.38□□□□□ -1.71
R3HDM1-205ENST00000425804 LARP4BQ92615 738 aaKnown RBP4.38□□□□□ -1.71
R3HDM1-205ENST00000425804 ATG4CQ96DT6 458 aa4.38□□□□□ -1.71
R3HDM1-205ENST00000425804 GNRHR2Q96P88 292 aa4.38□□□□□ -1.71
R3HDM1-205ENST00000425804 MTA3Q9BTC8 594 aa4.38□□□□□ -1.71
R3HDM1-205ENST00000425804 AK5Q9Y6K8 562 aa4.38□□□□□ -1.71
R3HDM1-205ENST00000425804 ERBB2P04626 1255 aa4.37□□□□□ -1.71
R3HDM1-205ENST00000425804 LDHBP07195 334 aaKnown RBP4.37□□□□□ -1.71
R3HDM1-205ENST00000425804 ADH4P08319 380 aa4.37□□□□□ -1.71
R3HDM1-205ENST00000425804 C1SP09871 688 aa4.37□□□□□ -1.71
R3HDM1-205ENST00000425804 DAB2P98082 770 aa4.37□□□□□ -1.71
R3HDM1-205ENST00000425804 ADAM9Q13443 819 aa4.37□□□□□ -1.71
R3HDM1-205ENST00000425804 ZC3H18Q86VM9 953 aaKnown RBP4.37□□□□□ -1.71
R3HDM1-205ENST00000425804 C7orf61Q8IZ16 206 aa4.37□□□□□ -1.71
R3HDM1-205ENST00000425804 RHOVQ96L33 236 aa4.37□□□□□ -1.71
R3HDM1-205ENST00000425804 PCDHB14Q9Y5E9 798 aa4.37□□□□□ -1.71
R3HDM1-205ENST00000425804 ITGB6P18564 788 aa4.36□□□□□ -1.71
R3HDM1-205ENST00000425804 ZC3H6P61129 1189 aaKnown RBP4.36□□□□□ -1.71
R3HDM1-205ENST00000425804 NLRC3Q7RTR2 1065 aa4.36□□□□□ -1.71
R3HDM1-205ENST00000425804 ZSCAN29Q8IWY8 852 aaPredicted RBP4.36□□□□□ -1.71
R3HDM1-205ENST00000425804 EDAQ92838 391 aa4.36□□□□□ -1.71
R3HDM1-205ENST00000425804 GULP1Q9UBP9 304 aa4.36□□□□□ -1.71
R3HDM1-205ENST00000425804 GNEQ9Y223 722 aaKnown RBP4.36□□□□□ -1.71
R3HDM1-205ENST00000425804 U2SURPO15042 1029 aaKnown RBP4.35□□□□□ -1.71
R3HDM1-205ENST00000425804 NTRK1P04629 796 aa4.35□□□□□ -1.71
R3HDM1-205ENST00000425804 P4HBP07237 508 aaKnown RBP4.35□□□□□ -1.71
R3HDM1-205ENST00000425804 MLLT6P55198 1093 aaPredicted RBP4.35□□□□□ -1.71
R3HDM1-205ENST00000425804 MRPS21P82921 87 aaKnown RBP4.35□□□□□ -1.71
R3HDM1-205ENST00000425804 FAM160A1Q05DH4 1040 aa4.35□□□□□ -1.71
R3HDM1-205ENST00000425804 KLHL36Q8N4N3 616 aa4.35□□□□□ -1.71
R3HDM1-205ENST00000425804 MMRN2Q9H8L6 949 aa4.35□□□□□ -1.71
R3HDM1-205ENST00000425804 ZDHHC9Q9Y397 364 aa4.35□□□□□ -1.71
R3HDM1-205ENST00000425804 TLR3O15455 904 aaKnown RBP4.34□□□□□ -1.71
R3HDM1-205ENST00000425804 ATE1O95260 518 aa4.34□□□□□ -1.71
R3HDM1-205ENST00000425804 CNOT4O95628 575 aaKnown RBP4.34□□□□□ -1.71
R3HDM1-205ENST00000425804 BRD1O95696 1058 aa4.34□□□□□ -1.71
R3HDM1-205ENST00000425804 CD3EP07766 207 aa4.34□□□□□ -1.71
R3HDM1-205ENST00000425804 BMP5P22003 454 aa4.34□□□□□ -1.71
R3HDM1-205ENST00000425804 NFATC3Q12968 1075 aa4.34□□□□□ -1.71
R3HDM1-205ENST00000425804 SNAP47Q5SQN1 464 aa4.34□□□□□ -1.71
R3HDM1-205ENST00000425804 FNDC7Q5VTL7 733 aa4.34□□□□□ -1.71
R3HDM1-205ENST00000425804 AGBL4Q5VU57 503 aa4.34□□□□□ -1.71
R3HDM1-205ENST00000425804 ZNF627Q7L945 461 aa4.34□□□□□ -1.71
R3HDM1-205ENST00000425804 C1orf210Q8IVY1 113 aa4.34□□□□□ -1.71
R3HDM1-205ENST00000425804 GOLM1Q8NBJ4 401 aa4.34□□□□□ -1.71
R3HDM1-205ENST00000425804 CACTINQ8WUQ7 758 aaKnown RBP4.34□□□□□ -1.71
R3HDM1-205ENST00000425804 ZCCHC14Q8WYQ9 949 aaKnown RBP4.34□□□□□ -1.71
R3HDM1-205ENST00000425804 BRF1Q92994 677 aa4.34□□□□□ -1.71
R3HDM1-205ENST00000425804 ZSWIM3Q96MP5 696 aa4.34□□□□□ -1.71
R3HDM1-205ENST00000425804 PLEKHG4BQ96PX9 1271 aa4.34□□□□□ -1.71
R3HDM1-205ENST00000425804 C9IYK1 514 aa4.33□□□□□ -1.72
R3HDM1-205ENST00000425804 RAMP2O60895 175 aa4.33□□□□□ -1.72
R3HDM1-205ENST00000425804 STAT5AP42229 794 aa4.33□□□□□ -1.72
R3HDM1-205ENST00000425804 ST13P50502 369 aaKnown RBP4.33□□□□□ -1.72
R3HDM1-205ENST00000425804 COL10A1Q03692 680 aa4.33□□□□□ -1.72
R3HDM1-205ENST00000425804 TAF1CQ15572 869 aaPredicted RBP4.33□□□□□ -1.72
R3HDM1-205ENST00000425804 ASB16Q96NS5 453 aa4.33□□□□□ -1.72
R3HDM1-205ENST00000425804 SEC61A2Q9H9S3 476 aa4.33□□□□□ -1.72
R3HDM1-205ENST00000425804 BRMS1Q9HCU9 246 aa4.33□□□□□ -1.72
R3HDM1-205ENST00000425804 RNF19AQ9NV58 838 aa4.33□□□□□ -1.72
R3HDM1-205ENST00000425804 IVNS1ABPQ9Y6Y0 642 aa4.33□□□□□ -1.72
R3HDM1-205ENST00000425804 COMTP21964 271 aa4.32□□□□□ -1.72
R3HDM1-205ENST00000425804 GBP2P32456 591 aaPredicted RBP4.32□□□□□ -1.72
R3HDM1-205ENST00000425804 ZNF445P59923 1031 aa4.32□□□□□ -1.72
R3HDM1-205ENST00000425804 PDE4CQ08493 712 aa4.32□□□□□ -1.72
R3HDM1-205ENST00000425804 CWF19L2Q2TBE0 894 aaKnown RBP4.32□□□□□ -1.72
R3HDM1-205ENST00000425804 NOL9Q5SY16 702 aaKnown RBP4.32□□□□□ -1.72
R3HDM1-205ENST00000425804 RCSD1Q6JBY9 416 aa4.32□□□□□ -1.72
R3HDM1-205ENST00000425804 FAM196AQ6ZSG2 479 aa4.32□□□□□ -1.72
R3HDM1-205ENST00000425804 DCP2Q8IU60 420 aaKnown RBP4.32□□□□□ -1.72
R3HDM1-205ENST00000425804 FAM126BQ8IXS8 530 aa4.32□□□□□ -1.72
R3HDM1-205ENST00000425804 CCDC144CPQ8IYA2 1237 aa4.32□□□□□ -1.72
R3HDM1-205ENST00000425804 FIBCD1Q8N539 461 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms