RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 CT47A1Q5JQC4 288 aaPredicted RBP4.59□□□□□ -1.67
SF3B1-205ENST00000424674 C10orf62Q5T681 223 aaPredicted RBP4.59□□□□□ -1.67
SF3B1-205ENST00000424674 NBPF12Q5TAG4 269 aaPredicted RBP4.59□□□□□ -1.67
SF3B1-205ENST00000424674 LCNL1Q6ZST4 164 aa4.59□□□□□ -1.67
SF3B1-205ENST00000424674 TMC3Q7Z5M5 1100 aa4.59□□□□□ -1.67
SF3B1-205ENST00000424674 CHPFQ8IZ52 775 aa4.59□□□□□ -1.67
SF3B1-205ENST00000424674 REXO1Q8N1G1 1221 aaKnown RBP4.59□□□□□ -1.67
SF3B1-205ENST00000424674 ZNF655Q8N720 491 aaPredicted RBP4.59□□□□□ -1.67
SF3B1-205ENST00000424674 MYRIPQ8NFW9 859 aa4.59□□□□□ -1.67
SF3B1-205ENST00000424674 SNRNP27Q8WVK2 155 aaKnown RBP4.59□□□□□ -1.67
SF3B1-205ENST00000424674 LINC01599Q8WXQ3 324 aa4.59□□□□□ -1.67
SF3B1-205ENST00000424674 E2F7Q96AV8 911 aa4.59□□□□□ -1.67
SF3B1-205ENST00000424674 TCTN2Q96GX1 697 aa4.59□□□□□ -1.67
SF3B1-205ENST00000424674 CDC5LQ99459 802 aaKnown RBP4.59□□□□□ -1.67
SF3B1-205ENST00000424674 G6PC3Q9BUM1 346 aa4.59□□□□□ -1.67
SF3B1-205ENST00000424674 FOXP3Q9BZS1 431 aa4.59□□□□□ -1.67
SF3B1-205ENST00000424674 CHST12Q9NRB3 414 aa4.59□□□□□ -1.67
SF3B1-205ENST00000424674 GOLGA6AQ9NYA3 693 aa4.59□□□□□ -1.67
SF3B1-205ENST00000424674 FRMD4BQ9Y2L6 1034 aa4.59□□□□□ -1.67
SF3B1-205ENST00000424674 MRPS23Q9Y3D9 190 aaKnown RBP4.59□□□□□ -1.67
SF3B1-205ENST00000424674 MRVI1Q9Y6F6 885 aa4.59□□□□□ -1.67
SF3B1-205ENST00000424674 SSU72P8A0A1W2PR75 194 aa4.58□□□□□ -1.68
SF3B1-205ENST00000424674 E2F8A0AVK6 867 aa4.58□□□□□ -1.68
SF3B1-205ENST00000424674 SHTN1A0MZ66 631 aa4.58□□□□□ -1.68
SF3B1-205ENST00000424674 PSPNO60542 156 aa4.58□□□□□ -1.68
SF3B1-205ENST00000424674 USP2O75604 605 aaPredicted RBP4.58□□□□□ -1.68
SF3B1-205ENST00000424674 IFIT2P09913 472 aaKnown RBP4.58□□□□□ -1.68
SF3B1-205ENST00000424674 FAM163BP0C2L3 166 aa4.58□□□□□ -1.68
SF3B1-205ENST00000424674 ZSCAN22P10073 491 aaPredicted RBP4.58□□□□□ -1.68
SF3B1-205ENST00000424674 PDE6BP35913 854 aa4.58□□□□□ -1.68
SF3B1-205ENST00000424674 SOX9P48436 509 aa4.58□□□□□ -1.68
SF3B1-205ENST00000424674 ZNF165P49910 485 aa4.58□□□□□ -1.68
SF3B1-205ENST00000424674 MCL1Q07820 350 aa4.58□□□□□ -1.68
SF3B1-205ENST00000424674 SQSTM1Q13501 440 aa4.58□□□□□ -1.68
SF3B1-205ENST00000424674 SNW1Q13573 536 aaKnown RBP4.58□□□□□ -1.68
SF3B1-205ENST00000424674 TKFCQ3LXA3 575 aa4.58□□□□□ -1.68
SF3B1-205ENST00000424674 LCE4AQ5TA78 99 aa4.58□□□□□ -1.68
SF3B1-205ENST00000424674 FBXW10Q5XX13 1052 aa4.58□□□□□ -1.68
SF3B1-205ENST00000424674 WWC2Q6AWC2 1192 aa4.58□□□□□ -1.68
SF3B1-205ENST00000424674 KSR2Q6VAB6 950 aa4.58□□□□□ -1.68
SF3B1-205ENST00000424674 WAPLQ7Z5K2 1190 aa4.58□□□□□ -1.68
SF3B1-205ENST00000424674 ZNF605Q86T29 641 aa4.58□□□□□ -1.68
SF3B1-205ENST00000424674 DDX42Q86XP3 938 aaKnown RBP eCLIP4.58□□□□□ -1.68
SF3B1-205ENST00000424674 SMAP1Q8IYB5 467 aaPredicted RBP4.58□□□□□ -1.68
SF3B1-205ENST00000424674 USHBP1Q8N6Y0 703 aa4.58□□□□□ -1.68
SF3B1-205ENST00000424674 THAP3Q8WTV1 239 aaPredicted RBP4.58□□□□□ -1.68
SF3B1-205ENST00000424674 CPLX3Q8WVH0 158 aa4.58□□□□□ -1.68
SF3B1-205ENST00000424674 ATG4CQ96DT6 458 aa4.58□□□□□ -1.68
SF3B1-205ENST00000424674 MAP6Q96JE9 813 aa4.58□□□□□ -1.68
SF3B1-205ENST00000424674 RSPH9Q9H1X1 276 aaPredicted RBP4.58□□□□□ -1.68
SF3B1-205ENST00000424674 CAAP1Q9H8G2 361 aa4.58□□□□□ -1.68
SF3B1-205ENST00000424674 ZMYM5Q9UJ78 669 aa4.58□□□□□ -1.68
SF3B1-205ENST00000424674 TCFL5Q9UL49 500 aa4.58□□□□□ -1.68
SF3B1-205ENST00000424674 EFR3BQ9Y2G0 817 aa4.58□□□□□ -1.68
SF3B1-205ENST00000424674 ZNF281Q9Y2X9 895 aa4.58□□□□□ -1.68
SF3B1-205ENST00000424674 MEIS3P2A8K0S8 358 aa4.57□□□□□ -1.68
SF3B1-205ENST00000424674 TNFRSF10CO14798 259 aa4.57□□□□□ -1.68
SF3B1-205ENST00000424674 PDPK1O15530 556 aa4.57□□□□□ -1.68
SF3B1-205ENST00000424674 SIGLEC6O43699 453 aa4.57□□□□□ -1.68
SF3B1-205ENST00000424674 PEX10O60683 326 aa4.57□□□□□ -1.68
SF3B1-205ENST00000424674 FKTNO75072 461 aa4.57□□□□□ -1.68
SF3B1-205ENST00000424674 SEMA7AO75326 666 aa4.57□□□□□ -1.68
SF3B1-205ENST00000424674 PRAMEF1O95521 474 aa4.57□□□□□ -1.68
SF3B1-205ENST00000424674 SYPP08247 313 aa4.57□□□□□ -1.68
SF3B1-205ENST00000424674 NME1P15531 152 aaKnown RBP4.57□□□□□ -1.68
SF3B1-205ENST00000424674 STAT3P40763 770 aa4.57□□□□□ -1.68
SF3B1-205ENST00000424674 KIR2DL1P43626 348 aaPredicted RBP4.57□□□□□ -1.68
SF3B1-205ENST00000424674 KIR2DL2P43627 348 aaPredicted RBP4.57□□□□□ -1.68
SF3B1-205ENST00000424674 LINC00310P59036 64 aa4.57□□□□□ -1.68
SF3B1-205ENST00000424674 LRRFIP1Q32MZ4 808 aaKnown RBP4.57□□□□□ -1.68
SF3B1-205ENST00000424674 BBS9Q3SYG4 887 aa4.57□□□□□ -1.68
SF3B1-205ENST00000424674 DALRD3Q5D0E6 543 aaKnown RBP4.57□□□□□ -1.68
SF3B1-205ENST00000424674 ZKSCAN2Q63HK3 967 aa4.57□□□□□ -1.68
SF3B1-205ENST00000424674 CIAPIN1Q6FI81 312 aa4.57□□□□□ -1.68
SF3B1-205ENST00000424674 SLC4A10Q6U841 1118 aa4.57□□□□□ -1.68
SF3B1-205ENST00000424674 C14orf80Q86SX3 495 aa4.57□□□□□ -1.68
SF3B1-205ENST00000424674 SIAH1Q8IUQ4 282 aa4.57□□□□□ -1.68
SF3B1-205ENST00000424674 SLITRK4Q8IW52 837 aa4.57□□□□□ -1.68
SF3B1-205ENST00000424674 CCDC89Q8N998 374 aa4.57□□□□□ -1.68
SF3B1-205ENST00000424674 LINC00116Q8NCU8 138 aa4.57□□□□□ -1.68
SF3B1-205ENST00000424674 TTC8Q8TAM2 541 aa4.57□□□□□ -1.68
SF3B1-205ENST00000424674 KCNN1Q92952 543 aa4.57□□□□□ -1.68
SF3B1-205ENST00000424674 SHISA4Q96DD7 197 aa4.57□□□□□ -1.68
SF3B1-205ENST00000424674 MFSD3Q96ES6 412 aa4.57□□□□□ -1.68
SF3B1-205ENST00000424674 NT5C1AQ9BXI3 368 aa4.57□□□□□ -1.68
SF3B1-205ENST00000424674 MCOLN1Q9GZU1 580 aa4.57□□□□□ -1.68
SF3B1-205ENST00000424674 MKRN2Q9H000 416 aaKnown RBP4.57□□□□□ -1.68
SF3B1-205ENST00000424674 AS3MTQ9HBK9 375 aa4.57□□□□□ -1.68
SF3B1-205ENST00000424674 PPT2Q9UMR5 302 aa4.57□□□□□ -1.68
SF3B1-205ENST00000424674 SMG5Q9UPR3 1016 aaKnown RBP4.57□□□□□ -1.68
SF3B1-205ENST00000424674 RPGRIP1LQ68CZ1 1315 aa4.56□□□□□ -1.68
SF3B1-205ENST00000424674 WASHC2CQ9Y4E1 1318 aa4.56□□□□□ -1.68
SF3B1-205ENST00000424674 MYOCOSA0A1B0GUC4 107 aa4.56□□□□□ -1.68
SF3B1-205ENST00000424674 TMEM82A0PJX8 343 aa4.56□□□□□ -1.68
SF3B1-205ENST00000424674 BICDL2A1A5D9 508 aa4.56□□□□□ -1.68
SF3B1-205ENST00000424674 ASMTLO95671 621 aa4.56□□□□□ -1.68
SF3B1-205ENST00000424674 GALK1P51570 392 aa4.56□□□□□ -1.68
SF3B1-205ENST00000424674 NEK2P51955 445 aa4.56□□□□□ -1.68
SF3B1-205ENST00000424674 PURAQ00577 322 aaKnown RBP4.56□□□□□ -1.68
SF3B1-205ENST00000424674 NFKB2Q00653 900 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms