RNA–Protein interactions for RNA: ENST00000424059.1

PMS1-209, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 2,004 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-209ENST00000424059 CBFA2T2O43439 604 aa3.75□□□□□ -1.81
PMS1-209ENST00000424059 PLA2G1BP04054 148 aaKnown RBP3.75□□□□□ -1.81
PMS1-209ENST00000424059 TP53P04637 393 aaPredicted RBP3.75□□□□□ -1.81
PMS1-209ENST00000424059 EIF6P56537 245 aaKnown RBP3.75□□□□□ -1.81
PMS1-209ENST00000424059 SLC7A5Q01650 507 aa3.75□□□□□ -1.81
PMS1-209ENST00000424059 FBXW10Q5XX13 1052 aa3.75□□□□□ -1.81
PMS1-209ENST00000424059 SPTY2D1Q68D10 685 aaPredicted RBP3.75□□□□□ -1.81
PMS1-209ENST00000424059 HEATR6Q6AI08 1181 aaKnown RBP3.75□□□□□ -1.81
PMS1-209ENST00000424059 LZTR1Q8N653 840 aa3.75□□□□□ -1.81
PMS1-209ENST00000424059 SYT8Q8NBV8 401 aa3.75□□□□□ -1.81
PMS1-209ENST00000424059 RASGRP4Q8TDF6 673 aa3.75□□□□□ -1.81
PMS1-209ENST00000424059 BACE2Q9Y5Z0 518 aa3.75□□□□□ -1.81
PMS1-209ENST00000424059 SCAMP3O14828 347 aaKnown RBP3.75□□□□□ -1.81
PMS1-209ENST00000424059 GIPRP48546 466 aa3.75□□□□□ -1.81
PMS1-209ENST00000424059 ZNF143P52747 638 aaPredicted RBP3.75□□□□□ -1.81
PMS1-209ENST00000424059 AMPD2Q01433 879 aa3.75□□□□□ -1.81
PMS1-209ENST00000424059 PLP2Q04941 152 aa3.75□□□□□ -1.81
PMS1-209ENST00000424059 RTP5Q14D33 572 aa3.75□□□□□ -1.81
PMS1-209ENST00000424059 ZYXQ15942 572 aaKnown RBP3.75□□□□□ -1.81
PMS1-209ENST00000424059 ZDHHC14Q8IZN3 488 aa3.75□□□□□ -1.81
PMS1-209ENST00000424059 FAM9BQ8IZU0 186 aa3.75□□□□□ -1.81
PMS1-209ENST00000424059 ARHGEF39Q8N4T4 335 aa3.75□□□□□ -1.81
PMS1-209ENST00000424059 CRACR2BQ8N4Y2 399 aaPredicted RBP3.75□□□□□ -1.81
PMS1-209ENST00000424059 PALD1Q9ULE6 856 aa3.75□□□□□ -1.81
PMS1-209ENST00000424059 PPT2Q9UMR5 302 aa3.75□□□□□ -1.81
PMS1-209ENST00000424059 K7ESM1 405 aa3.74□□□□□ -1.81
PMS1-209ENST00000424059 NPHS1O60500 1241 aa3.74□□□□□ -1.81
PMS1-209ENST00000424059 PAMP19021 973 aa3.74□□□□□ -1.81
PMS1-209ENST00000424059 SEPHS1P49903 392 aa3.74□□□□□ -1.81
PMS1-209ENST00000424059 GJA9P57773 515 aa3.74□□□□□ -1.81
PMS1-209ENST00000424059 KRTAP10-2P60368 255 aa3.74□□□□□ -1.81
PMS1-209ENST00000424059 CACNB2Q08289 660 aaPredicted RBP3.74□□□□□ -1.81
PMS1-209ENST00000424059 ZNF394Q53GI3 561 aa3.74□□□□□ -1.81
PMS1-209ENST00000424059 UBXN11Q5T124 520 aa3.74□□□□□ -1.81
PMS1-209ENST00000424059 RUFY4Q6ZNE9 571 aa3.74□□□□□ -1.81
PMS1-209ENST00000424059 CARFQ8N187 725 aa3.74□□□□□ -1.81
PMS1-209ENST00000424059 YTHDC1Q96MU7 727 aaKnown RBP3.74□□□□□ -1.81
PMS1-209ENST00000424059 MTA3Q9BTC8 594 aa3.74□□□□□ -1.81
PMS1-209ENST00000424059 BDH2Q9BUT1 245 aa3.74□□□□□ -1.81
PMS1-209ENST00000424059 BACH2Q9BYV9 841 aa3.74□□□□□ -1.81
PMS1-209ENST00000424059 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP3.74□□□□□ -1.81
PMS1-209ENST00000424059 MYRFQ9Y2G1 1151 aa3.74□□□□□ -1.81
PMS1-209ENST00000424059 LTBP3Q9NS15 1303 aa3.74□□□□□ -1.81
PMS1-209ENST00000424059 TACR1P25103 407 aa3.73□□□□□ -1.81
PMS1-209ENST00000424059 PMLP29590 882 aa3.73□□□□□ -1.81
PMS1-209ENST00000424059 DLX2Q07687 328 aaPredicted RBP3.73□□□□□ -1.81
PMS1-209ENST00000424059 ZNF827Q17R98 1081 aa3.73□□□□□ -1.81
PMS1-209ENST00000424059 GNPTABQ3T906 1256 aa3.73□□□□□ -1.81
PMS1-209ENST00000424059 NT5DC1Q5TFE4 455 aa3.73□□□□□ -1.81
PMS1-209ENST00000424059 TTLL7Q6ZT98 887 aa3.73□□□□□ -1.81
PMS1-209ENST00000424059 DCP2Q8IU60 420 aaKnown RBP3.73□□□□□ -1.81
PMS1-209ENST00000424059 ZNF830Q96NB3 372 aaPredicted RBP3.73□□□□□ -1.81
PMS1-209ENST00000424059 ADAM7Q9H2U9 754 aa3.73□□□□□ -1.81
PMS1-209ENST00000424059 NTMQ9P121 344 aa3.73□□□□□ -1.81
PMS1-209ENST00000424059 CGGBP1Q9UFW8 167 aaPredicted RBP3.73□□□□□ -1.81
PMS1-209ENST00000424059 STRIP2Q9ULQ0 834 aa3.73□□□□□ -1.81
PMS1-209ENST00000424059 A0A1W2PQH9 124 aa3.73□□□□□ -1.81
PMS1-209ENST00000424059 C2orf71A6NGG8 1288 aa3.73□□□□□ -1.81
PMS1-209ENST00000424059 SARSP49591 514 aaKnown RBP3.73□□□□□ -1.81
PMS1-209ENST00000424059 CASP7P55210 303 aa3.73□□□□□ -1.81
PMS1-209ENST00000424059 PAK2Q13177 524 aa3.73□□□□□ -1.81
PMS1-209ENST00000424059 PPP2R5DQ14738 602 aa3.73□□□□□ -1.81
PMS1-209ENST00000424059 WWC2Q6AWC2 1192 aa3.73□□□□□ -1.81
PMS1-209ENST00000424059 TTC9BQ8N6N2 239 aa3.73□□□□□ -1.81
PMS1-209ENST00000424059 GPRASP2Q96D09 838 aa3.73□□□□□ -1.81
PMS1-209ENST00000424059 MMP19Q99542 508 aa3.73□□□□□ -1.81
PMS1-209ENST00000424059 GINM1Q9NU53 330 aa3.73□□□□□ -1.81
PMS1-209ENST00000424059 PCDHGB7Q9Y5F8 929 aa3.73□□□□□ -1.81
PMS1-209ENST00000424059 ANKRD34BA5PLL1 514 aa3.72□□□□□ -1.81
PMS1-209ENST00000424059 STXBP3O00186 592 aa3.72□□□□□ -1.81
PMS1-209ENST00000424059 RRP9O43818 475 aaKnown RBP3.72□□□□□ -1.81
PMS1-209ENST00000424059 NOBOXO60393 691 aa3.72□□□□□ -1.81
PMS1-209ENST00000424059 RACK1P63244 317 aaKnown RBP3.72□□□□□ -1.81
PMS1-209ENST00000424059 CALD1Q05682 793 aaKnown RBP3.72□□□□□ -1.81
PMS1-209ENST00000424059 POMZP3Q6PJE2 187 aa3.72□□□□□ -1.81
PMS1-209ENST00000424059 NME8Q8N427 588 aa3.72□□□□□ -1.81
PMS1-209ENST00000424059 SPATA25Q9BR10 227 aa3.72□□□□□ -1.81
PMS1-209ENST00000424059 MCMBPQ9BTE3 642 aa3.72□□□□□ -1.81
PMS1-209ENST00000424059 LNPKQ9C0E8 428 aa3.72□□□□□ -1.81
PMS1-209ENST00000424059 NGRNQ9NPE2 291 aaKnown RBP3.72□□□□□ -1.81
PMS1-209ENST00000424059 SLC52A1Q9NWF4 448 aa3.72□□□□□ -1.81
PMS1-209ENST00000424059 SH3BP1Q9Y3L3 701 aa3.72□□□□□ -1.81
PMS1-209ENST00000424059 HCFC2Q9Y5Z7 792 aa3.72□□□□□ -1.81
PMS1-209ENST00000424059 ADAMTS20P59510 1910 aa3.72□□□□□ -1.81
PMS1-209ENST00000424059 NPHP3-ACAD11A0A0J9YXS1 232 aa3.71□□□□□ -1.81
PMS1-209ENST00000424059 TTC36A6NLP5 189 aa3.71□□□□□ -1.81
PMS1-209ENST00000424059 SMARCA5O60264 1052 aaPredicted RBP3.71□□□□□ -1.81
PMS1-209ENST00000424059 FAM26FQ5R3K3 315 aa3.71□□□□□ -1.81
PMS1-209ENST00000424059 NOL8Q76FK4 1167 aaKnown RBP3.71□□□□□ -1.81
PMS1-209ENST00000424059 ADAT2Q7Z6V5 191 aaKnown RBP3.71□□□□□ -1.81
PMS1-209ENST00000424059 LINC00482Q8N8I6 264 aa3.71□□□□□ -1.81
PMS1-209ENST00000424059 EFR3BQ9Y2G0 817 aa3.71□□□□□ -1.81
PMS1-209ENST00000424059 PRICKLE3O43900 615 aaPredicted RBP3.71□□□□□ -1.82
PMS1-209ENST00000424059 ITGB3P05106 788 aa3.71□□□□□ -1.82
PMS1-209ENST00000424059 EPHX1P07099 455 aa3.71□□□□□ -1.82
PMS1-209ENST00000424059 CYP2C8P10632 490 aa3.71□□□□□ -1.82
PMS1-209ENST00000424059 GJA8P48165 433 aa3.71□□□□□ -1.82
PMS1-209ENST00000424059 ZXDCQ2QGD7 858 aaPredicted RBP3.71□□□□□ -1.82
PMS1-209ENST00000424059 RINLQ6ZS11 566 aa3.71□□□□□ -1.82
PMS1-209ENST00000424059 TSHZ1Q6ZSZ6 1077 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms