RNA–Protein interactions for RNA: ENST00000424011.6

CMTM3-202, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CMTM3, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-202ENST00000424011 ZNF658Q5TYW1 1059 aaPredicted RBP18.58■□□□□ 0.56
CMTM3-202ENST00000424011 SPATA1Q5VX52 437 aa18.58■□□□□ 0.56
CMTM3-202ENST00000424011 CCAR2Q8N163 923 aaKnown RBP18.58■□□□□ 0.56
CMTM3-202ENST00000424011 KRT222Q8N1A0 295 aa18.58■□□□□ 0.56
CMTM3-202ENST00000424011 NUP88Q99567 741 aaPredicted RBP18.58■□□□□ 0.56
CMTM3-202ENST00000424011 TSPYL1Q9H0U9 437 aa18.58■□□□□ 0.56
CMTM3-202ENST00000424011 DDX25Q9UHL0 483 aaKnown RBP18.58■□□□□ 0.56
CMTM3-202ENST00000424011 GJA3Q9Y6H8 435 aa18.58■□□□□ 0.56
CMTM3-202ENST00000424011 STAT2P52630 851 aa18.57■□□□□ 0.56
CMTM3-202ENST00000424011 AMPD3Q01432 767 aa18.57■□□□□ 0.56
CMTM3-202ENST00000424011 MAP3K10Q02779 954 aa18.57■□□□□ 0.56
CMTM3-202ENST00000424011 KCNB1Q14721 858 aa18.57■□□□□ 0.56
CMTM3-202ENST00000424011 SMYD4Q8IYR2 804 aaPredicted RBP18.57■□□□□ 0.56
CMTM3-202ENST00000424011 SYNRGQ9UMZ2 1314 aa18.57■□□□□ 0.56
CMTM3-202ENST00000424011 TDP2O95551 362 aa18.57■□□□□ 0.56
CMTM3-202ENST00000424011 CCDC47Q96A33 483 aaKnown RBP18.57■□□□□ 0.56
CMTM3-202ENST00000424011 KCND1Q9NSA2 647 aa18.57■□□□□ 0.56
CMTM3-202ENST00000424011 LRWD1Q9UFC0 647 aa18.57■□□□□ 0.56
CMTM3-202ENST00000424011 ZNF541Q9H0D2 1346 aa18.56■□□□□ 0.56
CMTM3-202ENST00000424011 NRDCO43847 1150 aa18.56■□□□□ 0.56
CMTM3-202ENST00000424011 FOSP01100 380 aaPredicted RBP18.56■□□□□ 0.56
CMTM3-202ENST00000424011 CAP2P40123 477 aa18.56■□□□□ 0.56
CMTM3-202ENST00000424011 IRX3P78415 501 aaPredicted RBP18.56■□□□□ 0.56
CMTM3-202ENST00000424011 E4F1Q66K89 784 aaPredicted RBP18.56■□□□□ 0.56
CMTM3-202ENST00000424011 KLHL10Q6JEL2 608 aa18.56■□□□□ 0.56
CMTM3-202ENST00000424011 NYAP1Q6ZVC0 841 aa18.56■□□□□ 0.56
CMTM3-202ENST00000424011 MICALL2Q8IY33 904 aa18.56■□□□□ 0.56
CMTM3-202ENST00000424011 PPP1R3GB7ZBB8 358 aa18.56■□□□□ 0.56
CMTM3-202ENST00000424011 SLC37A4O43826 429 aa18.56■□□□□ 0.56
CMTM3-202ENST00000424011 ASNSP08243 561 aa18.56■□□□□ 0.56
CMTM3-202ENST00000424011 PLCG1P19174 1290 aa18.56■□□□□ 0.56
CMTM3-202ENST00000424011 STX17P56962 302 aa18.56■□□□□ 0.56
CMTM3-202ENST00000424011 MAPK8IP2Q13387 824 aaPredicted RBP18.56■□□□□ 0.56
CMTM3-202ENST00000424011 MOXD1Q6UVY6 613 aa18.56■□□□□ 0.56
CMTM3-202ENST00000424011 CNOT7Q9UIV1 285 aaKnown RBP18.56■□□□□ 0.56
CMTM3-202ENST00000424011 MARCH6O60337 910 aa18.55■□□□□ 0.56
CMTM3-202ENST00000424011 EGFRP00533 1210 aa18.55■□□□□ 0.56
CMTM3-202ENST00000424011 ECE1P42892 770 aa18.55■□□□□ 0.56
CMTM3-202ENST00000424011 GOLGA8FQ08AF8 430 aa18.55■□□□□ 0.56
CMTM3-202ENST00000424011 GOLGA8DPQ0D2H9 430 aa18.55■□□□□ 0.56
CMTM3-202ENST00000424011 CHURC1Q8WUH1 139 aa18.55■□□□□ 0.56
CMTM3-202ENST00000424011 ANO3Q9BYT9 981 aa18.55■□□□□ 0.56
CMTM3-202ENST00000424011 STK17AQ9UEE5 414 aa18.55■□□□□ 0.56
CMTM3-202ENST00000424011 PRR12Q9ULL5 1215 aa18.55■□□□□ 0.56
CMTM3-202ENST00000424011 USP17L15C9J2P7 530 aa18.55■□□□□ 0.56
CMTM3-202ENST00000424011 USP17L13C9JLJ4 530 aa18.55■□□□□ 0.56
CMTM3-202ENST00000424011 USP17L11C9JVI0 530 aa18.55■□□□□ 0.56
CMTM3-202ENST00000424011 USP17L18D6R9N7 530 aa18.55■□□□□ 0.56
CMTM3-202ENST00000424011 USP17L22D6RA61 530 aa18.55■□□□□ 0.56
CMTM3-202ENST00000424011 USP17L17D6RBQ6 530 aa18.55■□□□□ 0.56
CMTM3-202ENST00000424011 USP17L19D6RCP7 530 aa18.55■□□□□ 0.56
CMTM3-202ENST00000424011 USP17L20D6RJB6 530 aa18.55■□□□□ 0.56
CMTM3-202ENST00000424011 EDIL3O43854 480 aa18.55■□□□□ 0.56
CMTM3-202ENST00000424011 USP17L24Q0WX57 530 aa18.55■□□□□ 0.56
CMTM3-202ENST00000424011 CEP135Q66GS9 1140 aa18.55■□□□□ 0.56
CMTM3-202ENST00000424011 USP17L6PQ6QN14 398 aa18.55■□□□□ 0.56
CMTM3-202ENST00000424011 CREBRFQ8IUR6 639 aa18.55■□□□□ 0.56
CMTM3-202ENST00000424011 SPICE1Q8N0Z3 855 aa18.55■□□□□ 0.56
CMTM3-202ENST00000424011 CDK5RAP3Q96JB5 506 aa18.55■□□□□ 0.56
CMTM3-202ENST00000424011 VCPKMTQ9H867 229 aa18.55■□□□□ 0.56
CMTM3-202ENST00000424011 PGAP2Q9UHJ9 254 aa18.55■□□□□ 0.56
CMTM3-202ENST00000424011 RWDD2AQ9UIY3 292 aa18.55■□□□□ 0.56
CMTM3-202ENST00000424011 MEIS2O14770 477 aa18.54■□□□□ 0.56
CMTM3-202ENST00000424011 PLA2G6O60733 806 aa18.54■□□□□ 0.56
CMTM3-202ENST00000424011 PTPN14Q15678 1187 aa18.54■□□□□ 0.56
CMTM3-202ENST00000424011 KRT79Q5XKE5 535 aa18.54■□□□□ 0.56
CMTM3-202ENST00000424011 MIGA2Q7L4E1 593 aa18.54■□□□□ 0.56
CMTM3-202ENST00000424011 ACER1Q8TDN7 264 aa18.54■□□□□ 0.56
CMTM3-202ENST00000424011 CYP3A7-CYP3A51PA0A087WV96 503 aa18.54■□□□□ 0.56
CMTM3-202ENST00000424011 CYP3A7P24462 503 aa18.54■□□□□ 0.56
CMTM3-202ENST00000424011 STIM1Q13586 685 aa18.54■□□□□ 0.56
CMTM3-202ENST00000424011 FAM160B2Q86V87 743 aa18.54■□□□□ 0.56
CMTM3-202ENST00000424011 CTAGE1Q96RT6 745 aa18.54■□□□□ 0.56
CMTM3-202ENST00000424011 GINM1Q9NU53 330 aa18.54■□□□□ 0.56
CMTM3-202ENST00000424011 SPDYE3A6NKU9 549 aa18.53■□□□□ 0.56
CMTM3-202ENST00000424011 YBX3P16989 372 aaKnown RBP eCLIP18.53■□□□□ 0.561e-6■■□□□ 12.5
CMTM3-202ENST00000424011 PAK1Q13153 545 aa18.53■□□□□ 0.56
CMTM3-202ENST00000424011 RASA3Q14644 834 aa18.53■□□□□ 0.56
CMTM3-202ENST00000424011 USH1GQ495M9 461 aa18.53■□□□□ 0.56
CMTM3-202ENST00000424011 SAMD7Q7Z3H4 446 aa18.53■□□□□ 0.56
CMTM3-202ENST00000424011 ZNF592Q92610 1267 aa18.53■□□□□ 0.56
CMTM3-202ENST00000424011 PLIN2Q99541 437 aa18.53■□□□□ 0.56
CMTM3-202ENST00000424011 C7orf25Q9BPX7 421 aa18.53■□□□□ 0.56
CMTM3-202ENST00000424011 MMTAG2Q9BU76 263 aaKnown RBP18.53■□□□□ 0.56
CMTM3-202ENST00000424011 LRRC27Q9C0I9 530 aa18.53■□□□□ 0.56
CMTM3-202ENST00000424011 SLC26A4O43511 780 aa18.52■□□□□ 0.56
CMTM3-202ENST00000424011 RHOBTB3O94955 611 aa18.52■□□□□ 0.56
CMTM3-202ENST00000424011 PPP1R2P41236 205 aa18.52■□□□□ 0.56
CMTM3-202ENST00000424011 KCNJ6P48051 423 aa18.52■□□□□ 0.56
CMTM3-202ENST00000424011 TBX2Q13207 712 aaPredicted RBP18.52■□□□□ 0.56
CMTM3-202ENST00000424011 TMX1Q9H3N1 280 aa18.52■□□□□ 0.56
CMTM3-202ENST00000424011 FAM53CQ9NYF3 392 aa18.52■□□□□ 0.56
CMTM3-202ENST00000424011 PCDHA12Q9UN75 941 aa18.52■□□□□ 0.56
CMTM3-202ENST00000424011 FAM83BQ5T0W9 1011 aa18.52■□□□□ 0.56
CMTM3-202ENST00000424011 SV2BQ7L1I2 683 aa18.52■□□□□ 0.56
CMTM3-202ENST00000424011 APTXQ7Z2E3 356 aaKnown RBP18.52■□□□□ 0.56
CMTM3-202ENST00000424011 SLFN12Q8IYM2 578 aa18.52■□□□□ 0.56
CMTM3-202ENST00000424011 GPC2Q8N158 579 aa18.52■□□□□ 0.56
CMTM3-202ENST00000424011 CTNND2Q9UQB3 1225 aa18.52■□□□□ 0.56
CMTM3-202ENST00000424011 PAXBP1Q9Y5B6 917 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms