RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 LCHNA4D1U4 455 aa19.77■□□□□ 0.76
CHCHD3-202ENST00000423635 WDR5P61964 334 aaKnown RBP19.77■□□□□ 0.76
CHCHD3-202ENST00000423635 TSHZ3Q63HK5 1081 aa19.77■□□□□ 0.76
CHCHD3-202ENST00000423635 AFAP1L1Q8TED9 768 aa19.77■□□□□ 0.76
CHCHD3-202ENST00000423635 PPP1R13LQ8WUF5 828 aa19.77■□□□□ 0.76
CHCHD3-202ENST00000423635 CTAGE1Q96RT6 745 aa19.77■□□□□ 0.76
CHCHD3-202ENST00000423635 INCENPQ9NQS7 918 aa19.77■□□□□ 0.76
CHCHD3-202ENST00000423635 PNMA2Q9UL42 364 aa19.77■□□□□ 0.76
CHCHD3-202ENST00000423635 NOD1Q9Y239 953 aa19.77■□□□□ 0.76
CHCHD3-202ENST00000423635 TANC1Q9C0D5 1861 aa19.77■□□□□ 0.76
CHCHD3-202ENST00000423635 PARNO95453 639 aaKnown RBP19.76■□□□□ 0.75
CHCHD3-202ENST00000423635 SLC16A2P36021 539 aa19.76■□□□□ 0.75
CHCHD3-202ENST00000423635 PDE4DQ08499 809 aa19.76■□□□□ 0.75
CHCHD3-202ENST00000423635 PTGISQ16647 500 aa19.76■□□□□ 0.75
CHCHD3-202ENST00000423635 SYDE2Q5VT97 1194 aa19.76■□□□□ 0.75
CHCHD3-202ENST00000423635 SLC30A10Q6XR72 485 aa19.76■□□□□ 0.75
CHCHD3-202ENST00000423635 RNF207Q6ZRF8 634 aa19.76■□□□□ 0.75
CHCHD3-202ENST00000423635 SESTD1Q86VW0 696 aa19.76■□□□□ 0.75
CHCHD3-202ENST00000423635 DNERQ8NFT8 737 aa19.76■□□□□ 0.75
CHCHD3-202ENST00000423635 COPS5Q92905 334 aa19.76■□□□□ 0.75
CHCHD3-202ENST00000423635 MPHOSPH6Q99547 160 aaKnown RBP19.76■□□□□ 0.75
CHCHD3-202ENST00000423635 DCTPP1Q9H773 170 aa19.76■□□□□ 0.75
CHCHD3-202ENST00000423635 SUGCTQ9HAC7 445 aa19.76■□□□□ 0.75
CHCHD3-202ENST00000423635 PIEZO1Q92508 2521 aa19.76■□□□□ 0.75
CHCHD3-202ENST00000423635 BRWD1Q9NSI6 2320 aa19.76■□□□□ 0.75
CHCHD3-202ENST00000423635 FAM86C2PA6NEL3 165 aa19.76■□□□□ 0.75
CHCHD3-202ENST00000423635 CXCL10P02778 98 aa19.76■□□□□ 0.75
CHCHD3-202ENST00000423635 TXNP10599 105 aaKnown RBP19.76■□□□□ 0.75
CHCHD3-202ENST00000423635 CALML3P27482 149 aa19.76■□□□□ 0.75
CHCHD3-202ENST00000423635 ERVK-21P61565 698 aa19.76■□□□□ 0.75
CHCHD3-202ENST00000423635 RBL2Q08999 1139 aa19.76■□□□□ 0.75
CHCHD3-202ENST00000423635 ZMYM1Q5SVZ6 1142 aa19.76■□□□□ 0.75
CHCHD3-202ENST00000423635 CCDC155Q8N6L0 562 aa19.76■□□□□ 0.75
CHCHD3-202ENST00000423635 RAD9AQ99638 391 aa19.76■□□□□ 0.75
CHCHD3-202ENST00000423635 ANAPC4Q9UJX5 808 aa19.76■□□□□ 0.75
CHCHD3-202ENST00000423635 TRIP12Q14669 1992 aaPredicted RBP19.75■□□□□ 0.75
CHCHD3-202ENST00000423635 PRR33A8MZF0 331 aa19.75■□□□□ 0.75
CHCHD3-202ENST00000423635 FOXP2O15409 715 aa19.75■□□□□ 0.75
CHCHD3-202ENST00000423635 FGRP09769 529 aa19.75■□□□□ 0.75
CHCHD3-202ENST00000423635 SELPP16109 830 aa19.75■□□□□ 0.75
CHCHD3-202ENST00000423635 RPS6P62753 249 aaKnown RBP19.75■□□□□ 0.75
CHCHD3-202ENST00000423635 CTDSPL2Q05D32 466 aa19.75■□□□□ 0.75
CHCHD3-202ENST00000423635 CCDC96Q2M329 555 aa19.75■□□□□ 0.75
CHCHD3-202ENST00000423635 LEXMQ3ZCV2 418 aa19.75■□□□□ 0.75
CHCHD3-202ENST00000423635 FAM178BQ8IXR5 827 aa19.75■□□□□ 0.75
CHCHD3-202ENST00000423635 GDPD5Q8WTR4 605 aa19.75■□□□□ 0.75
CHCHD3-202ENST00000423635 ZBED2Q9BTP6 218 aa19.75■□□□□ 0.75
CHCHD3-202ENST00000423635 UBE2ZQ9H832 354 aaPredicted RBP19.75■□□□□ 0.75
CHCHD3-202ENST00000423635 MTMR7Q9Y216 660 aa19.75■□□□□ 0.75
CHCHD3-202ENST00000423635 PTPRSQ13332 1948 aa19.74■□□□□ 0.75
CHCHD3-202ENST00000423635 MUC6Q6W4X9 2439 aa19.74■□□□□ 0.75
CHCHD3-202ENST00000423635 B4DLN1 442 aa19.74■□□□□ 0.75
CHCHD3-202ENST00000423635 ORC4O43929 436 aa19.74■□□□□ 0.75
CHCHD3-202ENST00000423635 GJB5O95377 273 aa19.74■□□□□ 0.75
CHCHD3-202ENST00000423635 MRPL12P52815 198 aaKnown RBP19.74■□□□□ 0.75
CHCHD3-202ENST00000423635 DEFB103AP81534 67 aa19.74■□□□□ 0.75
CHCHD3-202ENST00000423635 CCDC62Q6P9F0 684 aa19.74■□□□□ 0.75
CHCHD3-202ENST00000423635 CNKSR3Q6P9H4 555 aa19.74■□□□□ 0.75
CHCHD3-202ENST00000423635 TMCO2Q7Z6W1 182 aaPredicted RBP19.74■□□□□ 0.75
CHCHD3-202ENST00000423635 GJD3Q8N144 294 aa19.74■□□□□ 0.75
CHCHD3-202ENST00000423635 TGS1Q96RS0 853 aaKnown RBP19.74■□□□□ 0.75
CHCHD3-202ENST00000423635 TTC41PQ6P2S7 1318 aa19.73■□□□□ 0.75
CHCHD3-202ENST00000423635 ABHD14A-ACY1A0A1B0GW23 586 aa19.73■□□□□ 0.75
CHCHD3-202ENST00000423635 RANBP6O60518 1105 aaKnown RBP19.73■□□□□ 0.75
CHCHD3-202ENST00000423635 ARIH2O95376 493 aa19.73■□□□□ 0.75
CHCHD3-202ENST00000423635 GDF6Q6KF10 455 aaPredicted RBP19.73■□□□□ 0.75
CHCHD3-202ENST00000423635 LRRC8DQ7L1W4 858 aa19.73■□□□□ 0.75
CHCHD3-202ENST00000423635 RGS22Q8NE09 1264 aa19.73■□□□□ 0.75
CHCHD3-202ENST00000423635 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.73■□□□□ 0.75
CHCHD3-202ENST00000423635 DHX38Q92620 1227 aaKnown RBP19.73■□□□□ 0.75
CHCHD3-202ENST00000423635 COL4A4P53420 1690 aaPredicted RBP19.72■□□□□ 0.75
CHCHD3-202ENST00000423635 LINC01553A4QN01 128 aa19.72■□□□□ 0.75
CHCHD3-202ENST00000423635 NBNO60934 754 aa19.72■□□□□ 0.75
CHCHD3-202ENST00000423635 TOP1P11387 765 aaKnown RBP19.72■□□□□ 0.75
CHCHD3-202ENST00000423635 KAT2BQ92831 832 aa19.72■□□□□ 0.75
CHCHD3-202ENST00000423635 TMEM47Q9BQJ4 181 aa19.72■□□□□ 0.75
CHCHD3-202ENST00000423635 TCP11L1Q9NUJ3 509 aa19.72■□□□□ 0.75
CHCHD3-202ENST00000423635 WDR19Q8NEZ3 1342 aa19.71■□□□□ 0.75
CHCHD3-202ENST00000423635 EFCAB14O75071 495 aa19.71■□□□□ 0.75
CHCHD3-202ENST00000423635 CKBP12277 381 aa19.71■□□□□ 0.75
CHCHD3-202ENST00000423635 TCTN1Q2MV58 587 aa19.71■□□□□ 0.75
CHCHD3-202ENST00000423635 ALYREFQ86V81 257 aaKnown RBP19.71■□□□□ 0.75
CHCHD3-202ENST00000423635 PI4K2BQ8TCG2 481 aa19.71■□□□□ 0.75
CHCHD3-202ENST00000423635 AFG1LQ8WV93 481 aa19.71■□□□□ 0.75
CHCHD3-202ENST00000423635 MAF1Q9H063 256 aa19.71■□□□□ 0.75
CHCHD3-202ENST00000423635 GPCPD1Q9NPB8 672 aa19.71■□□□□ 0.75
CHCHD3-202ENST00000423635 FRMPD2Q68DX3 1309 aaPredicted RBP19.7■□□□□ 0.74
CHCHD3-202ENST00000423635 MMP3P08254 477 aa19.7■□□□□ 0.74
CHCHD3-202ENST00000423635 PDHBP11177 359 aa19.7■□□□□ 0.74
CHCHD3-202ENST00000423635 ALADP13716 330 aa19.7■□□□□ 0.74
CHCHD3-202ENST00000423635 CASTP20810 708 aaKnown RBP19.7■□□□□ 0.74
CHCHD3-202ENST00000423635 IKBKEQ14164 716 aa19.7■□□□□ 0.74
CHCHD3-202ENST00000423635 FSD1Q9BTV5 496 aa19.7■□□□□ 0.74
CHCHD3-202ENST00000423635 GTF2IRD1Q9UHL9 959 aa19.7■□□□□ 0.74
CHCHD3-202ENST00000423635 CHMP4BP1P59074 171 aa19.69■□□□□ 0.74
CHCHD3-202ENST00000423635 ARHGAP1Q07960 439 aa19.69■□□□□ 0.74
CHCHD3-202ENST00000423635 ALX1Q15699 326 aa19.69■□□□□ 0.74
CHCHD3-202ENST00000423635 MTUS1Q9ULD2 1270 aa19.69■□□□□ 0.74
CHCHD3-202ENST00000423635 GRXCR2A6NFK2 248 aa19.68■□□□□ 0.74
CHCHD3-202ENST00000423635 GH1P01241 217 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms