RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 GCOM1H8Y6P7 765 aaPredicted RBP12.65□□□□□ -0.38
USP49-204ENST00000423567 PPP1R11O60927 126 aaPredicted RBP12.65□□□□□ -0.38
USP49-204ENST00000423567 ADAMTS4O75173 837 aa12.65□□□□□ -0.38
USP49-204ENST00000423567 PLEKHA8P1O95397 391 aa12.65□□□□□ -0.38
USP49-204ENST00000423567 POLR2MP0CAP2 368 aa12.65□□□□□ -0.38
USP49-204ENST00000423567 CASTP20810 708 aaKnown RBP12.65□□□□□ -0.38
USP49-204ENST00000423567 ADCYAP1R1P41586 468 aa12.65□□□□□ -0.38
USP49-204ENST00000423567 COL9A3Q14050 684 aaPredicted RBP12.65□□□□□ -0.38
USP49-204ENST00000423567 RTN1Q16799 776 aa12.65□□□□□ -0.38
USP49-204ENST00000423567 ARHGEF16Q5VV41 709 aa12.65□□□□□ -0.38
USP49-204ENST00000423567 APOA5Q6Q788 366 aa12.65□□□□□ -0.38
USP49-204ENST00000423567 Q6ZUG5 572 aa12.65□□□□□ -0.38
USP49-204ENST00000423567 RMDN3Q96TC7 470 aa12.65□□□□□ -0.38
USP49-204ENST00000423567 TSEN34Q9BSV6 310 aaKnown RBP12.65□□□□□ -0.38
USP49-204ENST00000423567 USP26Q9BXU7 913 aa12.65□□□□□ -0.38
USP49-204ENST00000423567 AP5M1Q9H0R1 490 aa12.65□□□□□ -0.38
USP49-204ENST00000423567 CCDC196A0A1B0GTZ2 297 aa12.64□□□□□ -0.39
USP49-204ENST00000423567 MOXD2PA6NHM9 499 aa12.64□□□□□ -0.39
USP49-204ENST00000423567 ZEB2O60315 1214 aa12.64□□□□□ -0.39
USP49-204ENST00000423567 RPS6KB1P23443 525 aa12.64□□□□□ -0.39
USP49-204ENST00000423567 RCAN1P53805 252 aa12.64□□□□□ -0.39
USP49-204ENST00000423567 GJA9P57773 515 aa12.64□□□□□ -0.39
USP49-204ENST00000423567 PPP2R5BQ15173 497 aa12.64□□□□□ -0.39
USP49-204ENST00000423567 SLC35G1Q2M3R5 365 aa12.64□□□□□ -0.39
USP49-204ENST00000423567 TMTC3Q6ZXV5 915 aa12.64□□□□□ -0.39
USP49-204ENST00000423567 TLK2Q86UE8 772 aa12.64□□□□□ -0.39
USP49-204ENST00000423567 CCDC82Q8N4S0 544 aa12.64□□□□□ -0.39
USP49-204ENST00000423567 SRBD1Q8N5C6 995 aaKnown RBP12.64□□□□□ -0.39
USP49-204ENST00000423567 SCFD2Q8WU76 684 aa12.64□□□□□ -0.39
USP49-204ENST00000423567 TBC1D5Q92609 795 aa12.64□□□□□ -0.39
USP49-204ENST00000423567 CUL5Q93034 780 aa12.64□□□□□ -0.39
USP49-204ENST00000423567 FERMT2Q96AC1 680 aa12.64□□□□□ -0.39
USP49-204ENST00000423567 TAAR1Q96RJ0 339 aa12.64□□□□□ -0.39
USP49-204ENST00000423567 IWS1Q96ST2 819 aa12.64□□□□□ -0.39
USP49-204ENST00000423567 PDGFCQ9NRA1 345 aa12.64□□□□□ -0.39
USP49-204ENST00000423567 PHF24Q9UPV7 400 aa12.64□□□□□ -0.39
USP49-204ENST00000423567 CYP46A1Q9Y6A2 500 aa12.64□□□□□ -0.39
USP49-204ENST00000423567 DDX49Q9Y6V7 483 aaKnown RBP12.64□□□□□ -0.39
USP49-204ENST00000423567 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.63□□□□□ -0.39
USP49-204ENST00000423567 DYNC1LI2O43237 492 aaPredicted RBP12.63□□□□□ -0.39
USP49-204ENST00000423567 CPA1P15085 419 aa12.63□□□□□ -0.39
USP49-204ENST00000423567 SMPD1P17405 629 aa12.63□□□□□ -0.39
USP49-204ENST00000423567 EDNRBP24530 442 aa12.63□□□□□ -0.39
USP49-204ENST00000423567 CST5P28325 142 aaPredicted RBP12.63□□□□□ -0.39
USP49-204ENST00000423567 HOXA13P31271 388 aaPredicted RBP12.63□□□□□ -0.39
USP49-204ENST00000423567 HSD17B4P51659 736 aa12.63□□□□□ -0.39
USP49-204ENST00000423567 GHRHRQ02643 423 aa12.63□□□□□ -0.39
USP49-204ENST00000423567 STXBP2Q15833 593 aa12.63□□□□□ -0.39
USP49-204ENST00000423567 LRRC26Q2I0M4 334 aa12.63□□□□□ -0.39
USP49-204ENST00000423567 DUSP28Q4G0W2 176 aa12.63□□□□□ -0.39
USP49-204ENST00000423567 BRDTQ58F21 947 aaPredicted RBP12.63□□□□□ -0.39
USP49-204ENST00000423567 GNASQ5JWF2 1037 aa12.63□□□□□ -0.39
USP49-204ENST00000423567 TAPT1Q6NXT6 567 aa12.63□□□□□ -0.39
USP49-204ENST00000423567 CMTR1Q8N1G2 835 aaKnown RBP12.63□□□□□ -0.39
USP49-204ENST00000423567 BRF1Q92994 677 aa12.63□□□□□ -0.39
USP49-204ENST00000423567 VTI1AQ96AJ9 217 aa12.63□□□□□ -0.39
USP49-204ENST00000423567 WDR11Q9BZH6 1224 aa12.63□□□□□ -0.39
USP49-204ENST00000423567 UPF3AQ9H1J1 476 aaKnown RBP12.63□□□□□ -0.39
USP49-204ENST00000423567 PRKAG2Q9UGJ0 569 aa12.63□□□□□ -0.39
USP49-204ENST00000423567 BRPF3Q9ULD4 1205 aa12.63□□□□□ -0.39
USP49-204ENST00000423567 Q9Y3F1 56 aa12.63□□□□□ -0.39
USP49-204ENST00000423567 TNRC18O15417 2968 aaPredicted RBP12.63□□□□□ -0.39
USP49-204ENST00000423567 A0A1W2PQ45 241 aaPredicted RBP12.62□□□□□ -0.39
USP49-204ENST00000423567 A0A1W2PQY0 241 aa12.62□□□□□ -0.39
USP49-204ENST00000423567 NKRFO15226 690 aaKnown RBP eCLIP12.62□□□□□ -0.39
USP49-204ENST00000423567 ADCY6O43306 1168 aa12.62□□□□□ -0.39
USP49-204ENST00000423567 EIF2AK2P19525 551 aaKnown RBP12.62□□□□□ -0.39
USP49-204ENST00000423567 METAP2P50579 478 aaKnown RBP eCLIP12.62□□□□□ -0.39
USP49-204ENST00000423567 ACLYP53396 1101 aa12.62□□□□□ -0.39
USP49-204ENST00000423567 RTP1P59025 263 aa12.62□□□□□ -0.39
USP49-204ENST00000423567 APOBRQ0VD83 1088 aa12.62□□□□□ -0.39
USP49-204ENST00000423567 TTLL4Q14679 1199 aa12.62□□□□□ -0.39
USP49-204ENST00000423567 KCNA10Q16322 511 aa12.62□□□□□ -0.39
USP49-204ENST00000423567 FSCN1Q16658 493 aaKnown RBP12.62□□□□□ -0.39
USP49-204ENST00000423567 SLC39A5Q6ZMH5 540 aa12.62□□□□□ -0.39
USP49-204ENST00000423567 RUFY3Q7L099 469 aa12.62□□□□□ -0.39
USP49-204ENST00000423567 FCHSD1Q86WN1 690 aa12.62□□□□□ -0.39
USP49-204ENST00000423567 KLHDC9Q8NEP7 349 aa12.62□□□□□ -0.39
USP49-204ENST00000423567 SMARCC2Q8TAQ2 1214 aa12.62□□□□□ -0.39
USP49-204ENST00000423567 GLT1D1Q96MS3 346 aa12.62□□□□□ -0.39
USP49-204ENST00000423567 STARD7Q9NQZ5 370 aa12.62□□□□□ -0.39
USP49-204ENST00000423567 PXMP2Q9NR77 195 aa12.62□□□□□ -0.39
USP49-204ENST00000423567 COL20A1Q9P218 1284 aa12.62□□□□□ -0.39
USP49-204ENST00000423567 ZMYND8Q9ULU4 1186 aaPredicted RBP12.62□□□□□ -0.39
USP49-204ENST00000423567 COLQQ9Y215 455 aaPredicted RBP12.62□□□□□ -0.39
USP49-204ENST00000423567 GNEQ9Y223 722 aaKnown RBP12.62□□□□□ -0.39
USP49-204ENST00000423567 ATP11BQ9Y2G3 1177 aa12.62□□□□□ -0.39
USP49-204ENST00000423567 RBM47A0AV96 593 aaKnown RBP12.61□□□□□ -0.39
USP49-204ENST00000423567 MYADML2A6NDP7 307 aa12.61□□□□□ -0.39
USP49-204ENST00000423567 OPLAHO14841 1288 aa12.61□□□□□ -0.39
USP49-204ENST00000423567 EIF3JO75822 258 aaKnown RBP12.61□□□□□ -0.39
USP49-204ENST00000423567 CABYRO75952 493 aa12.61□□□□□ -0.39
USP49-204ENST00000423567 ASGR1P07306 291 aa12.61□□□□□ -0.39
USP49-204ENST00000423567 NR3C2P08235 984 aa12.61□□□□□ -0.39
USP49-204ENST00000423567 TXNP10599 105 aaKnown RBP12.61□□□□□ -0.39
USP49-204ENST00000423567 SEPT14Q6ZU15 432 aa12.61□□□□□ -0.39
USP49-204ENST00000423567 HEATR3Q7Z4Q2 680 aa12.61□□□□□ -0.39
USP49-204ENST00000423567 FBXL16Q8N461 479 aa12.61□□□□□ -0.39
USP49-204ENST00000423567 TM6SF1Q9BZW5 370 aa12.61□□□□□ -0.39
USP49-204ENST00000423567 ZSWIM6Q9HCJ5 1215 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms