RNA–Protein interactions for RNA: ENST00000422468.1

TRIM43CP-201, Transcript of tripartite motif containing 43C, pseudogene, humanhuman

BASIC

Gene TRIM43CP, Length 1,028 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43CP-201ENST00000422468 AP5M1Q9H0R1 490 aa9.58□□□□□ -0.88
TRIM43CP-201ENST00000422468 KAT14Q9H8E8 782 aa9.58□□□□□ -0.88
TRIM43CP-201ENST00000422468 VTA1Q9NP79 307 aa9.58□□□□□ -0.88
TRIM43CP-201ENST00000422468 TMEM39AQ9NV64 488 aa9.58□□□□□ -0.88
TRIM43CP-201ENST00000422468 ZSWIM5Q9P217 1185 aa9.58□□□□□ -0.88
TRIM43CP-201ENST00000422468 GNEQ9Y223 722 aaKnown RBP9.58□□□□□ -0.88
TRIM43CP-201ENST00000422468 BAZ2BQ9UIF8 2168 aaKnown RBP9.58□□□□□ -0.88
TRIM43CP-201ENST00000422468 TNKSO95271 1327 aa9.57□□□□□ -0.88
TRIM43CP-201ENST00000422468 RAD50Q92878 1312 aa9.57□□□□□ -0.88
TRIM43CP-201ENST00000422468 KIAA1217Q5T5P2 1943 aa9.57□□□□□ -0.88
TRIM43CP-201ENST00000422468 A0A0U1RQG5 324 aaPredicted RBP9.57□□□□□ -0.88
TRIM43CP-201ENST00000422468 PTPDC1A2A3K4 754 aa9.57□□□□□ -0.88
TRIM43CP-201ENST00000422468 RAG1P15918 1043 aa9.57□□□□□ -0.88
TRIM43CP-201ENST00000422468 SMPD1P17405 629 aa9.57□□□□□ -0.88
TRIM43CP-201ENST00000422468 ITGB8P26012 769 aa9.57□□□□□ -0.88
TRIM43CP-201ENST00000422468 ALDH5A1P51649 535 aaPredicted RBP9.57□□□□□ -0.88
TRIM43CP-201ENST00000422468 BEX3Q00994 111 aa9.57□□□□□ -0.88
TRIM43CP-201ENST00000422468 SHHQ15465 462 aa9.57□□□□□ -0.88
TRIM43CP-201ENST00000422468 ASPRV1Q53RT3 343 aa9.57□□□□□ -0.88
TRIM43CP-201ENST00000422468 SLC30A10Q6XR72 485 aa9.57□□□□□ -0.88
TRIM43CP-201ENST00000422468 RNF207Q6ZRF8 634 aa9.57□□□□□ -0.88
TRIM43CP-201ENST00000422468 EEPD1Q7L9B9 569 aa9.57□□□□□ -0.88
TRIM43CP-201ENST00000422468 TLK2Q86UE8 772 aa9.57□□□□□ -0.88
TRIM43CP-201ENST00000422468 FBXO16Q8IX29 292 aaPredicted RBP9.57□□□□□ -0.88
TRIM43CP-201ENST00000422468 RGS22Q8NE09 1264 aa9.57□□□□□ -0.88
TRIM43CP-201ENST00000422468 RUFY2Q8WXA3 655 aa9.57□□□□□ -0.88
TRIM43CP-201ENST00000422468 VTI1AQ96AJ9 217 aa9.57□□□□□ -0.88
TRIM43CP-201ENST00000422468 UBAC1Q9BSL1 405 aa9.57□□□□□ -0.88
TRIM43CP-201ENST00000422468 UBA5Q9GZZ9 404 aa9.57□□□□□ -0.88
TRIM43CP-201ENST00000422468 MAF1Q9H063 256 aa9.57□□□□□ -0.88
TRIM43CP-201ENST00000422468 PDGFCQ9NRA1 345 aa9.57□□□□□ -0.88
TRIM43CP-201ENST00000422468 METRNQ9UJH8 293 aa9.57□□□□□ -0.88
TRIM43CP-201ENST00000422468 Q9Y3F1 56 aa9.57□□□□□ -0.88
TRIM43CP-201ENST00000422468 A0A0C4DFX4 3053 aa9.57□□□□□ -0.88
TRIM43CP-201ENST00000422468 RBM47A0AV96 593 aaKnown RBP9.56□□□□□ -0.88
TRIM43CP-201ENST00000422468 ARVCFO00192 962 aa9.56□□□□□ -0.88
TRIM43CP-201ENST00000422468 DYNC1LI2O43237 492 aaPredicted RBP9.56□□□□□ -0.88
TRIM43CP-201ENST00000422468 ZEB2O60315 1214 aa9.56□□□□□ -0.88
TRIM43CP-201ENST00000422468 CABYRO75952 493 aa9.56□□□□□ -0.88
TRIM43CP-201ENST00000422468 CALML3P27482 149 aa9.56□□□□□ -0.88
TRIM43CP-201ENST00000422468 RPS6P62753 249 aaKnown RBP9.56□□□□□ -0.88
TRIM43CP-201ENST00000422468 FPGSQ05932 587 aa9.56□□□□□ -0.88
TRIM43CP-201ENST00000422468 NECTIN1Q15223 517 aa9.56□□□□□ -0.88
TRIM43CP-201ENST00000422468 FSCN1Q16658 493 aaKnown RBP9.56□□□□□ -0.88
TRIM43CP-201ENST00000422468 USH1GQ495M9 461 aa9.56□□□□□ -0.88
TRIM43CP-201ENST00000422468 DUSP28Q4G0W2 176 aa9.56□□□□□ -0.88
TRIM43CP-201ENST00000422468 C9orf50Q5SZB4 431 aa9.56□□□□□ -0.88
TRIM43CP-201ENST00000422468 FAM109BQ6ICB4 259 aaPredicted RBP9.56□□□□□ -0.88
TRIM43CP-201ENST00000422468 KIAA1211Q6ZU35 1233 aa9.56□□□□□ -0.88
TRIM43CP-201ENST00000422468 Q7L0L9 218 aa9.56□□□□□ -0.88
TRIM43CP-201ENST00000422468 MB21D2Q8IYB1 491 aaPredicted RBP9.56□□□□□ -0.88
TRIM43CP-201ENST00000422468 ADGRF4Q8IZF3 695 aa9.56□□□□□ -0.88
TRIM43CP-201ENST00000422468 DNERQ8NFT8 737 aa9.56□□□□□ -0.88
TRIM43CP-201ENST00000422468 MPHOSPH6Q99547 160 aaKnown RBP9.56□□□□□ -0.88
TRIM43CP-201ENST00000422468 TBX21Q9UL17 535 aa9.56□□□□□ -0.88
TRIM43CP-201ENST00000422468 RBM8AQ9Y5S9 174 aaKnown RBP9.56□□□□□ -0.88
TRIM43CP-201ENST00000422468 ABCB11O95342 1321 aa9.56□□□□□ -0.88
TRIM43CP-201ENST00000422468 B4DLN1 442 aa9.55□□□□□ -0.88
TRIM43CP-201ENST00000422468 TLR3O15455 904 aaKnown RBP9.55□□□□□ -0.88
TRIM43CP-201ENST00000422468 TIMP1P01033 207 aa9.55□□□□□ -0.88
TRIM43CP-201ENST00000422468 PARP1P09874 1014 aaKnown RBP9.55□□□□□ -0.88
TRIM43CP-201ENST00000422468 PTGS1P23219 599 aa9.55□□□□□ -0.88
TRIM43CP-201ENST00000422468 EDNRBP24530 442 aa9.55□□□□□ -0.88
TRIM43CP-201ENST00000422468 MRPL12P52815 198 aaKnown RBP9.55□□□□□ -0.88
TRIM43CP-201ENST00000422468 EPHB4P54760 987 aa9.55□□□□□ -0.88
TRIM43CP-201ENST00000422468 PDE4DQ08499 809 aa9.55□□□□□ -0.88
TRIM43CP-201ENST00000422468 TRDNQ13061 729 aa9.55□□□□□ -0.88
TRIM43CP-201ENST00000422468 DSG2Q14126 1118 aa9.55□□□□□ -0.88
TRIM43CP-201ENST00000422468 CDC37Q16543 378 aaPredicted RBP9.55□□□□□ -0.88
TRIM43CP-201ENST00000422468 ADCK5Q3MIX3 580 aa9.55□□□□□ -0.88
TRIM43CP-201ENST00000422468 TMEM63BQ5T3F8 832 aa9.55□□□□□ -0.88
TRIM43CP-201ENST00000422468 IFIT1BQ5T764 474 aaKnown RBP9.55□□□□□ -0.88
TRIM43CP-201ENST00000422468 CXCL17Q6UXB2 119 aa9.55□□□□□ -0.88
TRIM43CP-201ENST00000422468 CHST3Q7LGC8 479 aa9.55□□□□□ -0.88
TRIM43CP-201ENST00000422468 FAM126BQ8IXS8 530 aa9.55□□□□□ -0.88
TRIM43CP-201ENST00000422468 SLC43A3Q8NBI5 491 aa9.55□□□□□ -0.88
TRIM43CP-201ENST00000422468 SEZ6LQ9BYH1 1024 aa9.55□□□□□ -0.88
TRIM43CP-201ENST00000422468 WDR11Q9BZH6 1224 aa9.55□□□□□ -0.88
TRIM43CP-201ENST00000422468 MTMR10Q9NXD2 777 aa9.55□□□□□ -0.88
TRIM43CP-201ENST00000422468 C2orf72A6NCS6 295 aa9.54□□□□□ -0.88
TRIM43CP-201ENST00000422468 E7EWF7 191 aa9.54□□□□□ -0.88
TRIM43CP-201ENST00000422468 SLC27A2O14975 620 aa9.54□□□□□ -0.88
TRIM43CP-201ENST00000422468 DHX16O60231 1041 aaKnown RBP9.54□□□□□ -0.88
TRIM43CP-201ENST00000422468 CD4P01730 458 aa9.54□□□□□ -0.88
TRIM43CP-201ENST00000422468 CPA1P15085 419 aa9.54□□□□□ -0.88
TRIM43CP-201ENST00000422468 CPT1AP50416 773 aa9.54□□□□□ -0.88
TRIM43CP-201ENST00000422468 SMAD3P84022 425 aaKnown RBP9.54□□□□□ -0.88
TRIM43CP-201ENST00000422468 ITGA7Q13683 1181 aa9.54□□□□□ -0.88
TRIM43CP-201ENST00000422468 QRICH1Q2TAL8 776 aa9.54□□□□□ -0.88
TRIM43CP-201ENST00000422468 MFSD5Q6N075 450 aa9.54□□□□□ -0.88
TRIM43CP-201ENST00000422468 FBXO11Q86XK2 927 aa9.54□□□□□ -0.88
TRIM43CP-201ENST00000422468 MCF2L2Q86YR7 1114 aa9.54□□□□□ -0.88
TRIM43CP-201ENST00000422468 RNPC3Q96LT9 517 aaKnown RBP9.54□□□□□ -0.88
TRIM43CP-201ENST00000422468 TMEM121BQ9BXQ6 578 aaPredicted RBP9.54□□□□□ -0.88
TRIM43CP-201ENST00000422468 JMJD4Q9H9V9 463 aa9.54□□□□□ -0.88
TRIM43CP-201ENST00000422468 STXBP5LQ9Y2K9 1186 aa9.54□□□□□ -0.88
TRIM43CP-201ENST00000422468 GRIN2DO15399 1336 aa9.54□□□□□ -0.88
TRIM43CP-201ENST00000422468 MYH7BA7E2Y1 1941 aa9.53□□□□□ -0.88
TRIM43CP-201ENST00000422468 CHD9Q3L8U1 2897 aa9.53□□□□□ -0.88
TRIM43CP-201ENST00000422468 KLRF2D3W0D1 207 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms