RNA–Protein interactions for RNA: ENST00000421756.5

MCF2L-213, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-213ENST00000421756 PDE4CQ08493 712 aa14.89□□□□□ -0.03
MCF2L-213ENST00000421756 SEPT2Q15019 361 aa14.89□□□□□ -0.03
MCF2L-213ENST00000421756 POTEBQ6S5H4 581 aa14.89□□□□□ -0.03
MCF2L-213ENST00000421756 KIAA0895Q8NCT3 520 aa14.89□□□□□ -0.03
MCF2L-213ENST00000421756 CCDC42Q96M95 316 aa14.89□□□□□ -0.03
MCF2L-213ENST00000421756 MMTAG2Q9BU76 263 aaKnown RBP14.89□□□□□ -0.03
MCF2L-213ENST00000421756 ZMYND12Q9H0C1 365 aa14.89□□□□□ -0.03
MCF2L-213ENST00000421756 MLXIPQ9HAP2 919 aa14.89□□□□□ -0.03
MCF2L-213ENST00000421756 DDX25Q9UHL0 483 aaKnown RBP14.89□□□□□ -0.03
MCF2L-213ENST00000421756 PCDHA1Q9Y5I3 950 aa14.89□□□□□ -0.03
MCF2L-213ENST00000421756 CTAGE15A4D2H0 777 aa14.88□□□□□ -0.03
MCF2L-213ENST00000421756 CTAGE8P0CG41 777 aa14.88□□□□□ -0.03
MCF2L-213ENST00000421756 TCERG1LQ5VWI1 586 aa14.88□□□□□ -0.03
MCF2L-213ENST00000421756 CTAGE6Q86UF2 777 aa14.88□□□□□ -0.03
MCF2L-213ENST00000421756 CTAGE4Q8IX94 777 aa14.88□□□□□ -0.03
MCF2L-213ENST00000421756 SH2D3AQ9BRG2 576 aa14.88□□□□□ -0.03
MCF2L-213ENST00000421756 TDRD3Q9H7E2 651 aaKnown RBP14.88□□□□□ -0.03
MCF2L-213ENST00000421756 JMJD4Q9H9V9 463 aa14.88□□□□□ -0.03
MCF2L-213ENST00000421756 GOLGA6L9A6NEM1 432 aa14.88□□□□□ -0.03
MCF2L-213ENST00000421756 PPP1R11O60927 126 aaPredicted RBP14.88□□□□□ -0.03
MCF2L-213ENST00000421756 HERC4Q5GLZ8 1057 aaPredicted RBP14.88□□□□□ -0.03
MCF2L-213ENST00000421756 CDC42EP5Q6NZY7 148 aa14.88□□□□□ -0.03
MCF2L-213ENST00000421756 TMED8Q6PL24 325 aaPredicted RBP14.88□□□□□ -0.03
MCF2L-213ENST00000421756 LARP4BQ92615 738 aaKnown RBP14.88□□□□□ -0.03
MCF2L-213ENST00000421756 IKZF4Q9H2S9 585 aa14.88□□□□□ -0.03
MCF2L-213ENST00000421756 SEMA6BQ9H3T3 888 aa14.88□□□□□ -0.03
MCF2L-213ENST00000421756 LIMA1Q9UHB6 759 aaKnown RBP14.88□□□□□ -0.03
MCF2L-213ENST00000421756 ANKRD36CQ5JPF3 1778 aa14.88□□□□□ -0.03
MCF2L-213ENST00000421756 DDX60Q8IY21 1712 aaKnown RBP14.88□□□□□ -0.03
MCF2L-213ENST00000421756 PABPC4Q13310 644 aaKnown RBP eCLIP14.88□□□□□ -0.03
MCF2L-213ENST00000421756 CC2D1AQ6P1N0 951 aaPredicted RBP14.88□□□□□ -0.03
MCF2L-213ENST00000421756 JAKMIP2Q96AA8 810 aa14.88□□□□□ -0.03
MCF2L-213ENST00000421756 PDE11AQ9HCR9 933 aa14.88□□□□□ -0.03
MCF2L-213ENST00000421756 PPP1R1BQ9UD71 204 aaPredicted RBP14.88□□□□□ -0.03
MCF2L-213ENST00000421756 PCDHA12Q9UN75 941 aa14.88□□□□□ -0.03
MCF2L-213ENST00000421756 REXO2Q9Y3B8 237 aaKnown RBP14.88□□□□□ -0.03
MCF2L-213ENST00000421756 MYH8P13535 1937 aa14.87□□□□□ -0.03
MCF2L-213ENST00000421756 DDTLA6NHG4 134 aaPredicted RBP14.87□□□□□ -0.03
MCF2L-213ENST00000421756 NCK2O43639 380 aa14.87□□□□□ -0.03
MCF2L-213ENST00000421756 APBA3O96018 575 aa14.87□□□□□ -0.03
MCF2L-213ENST00000421756 GRB10Q13322 594 aa14.87□□□□□ -0.03
MCF2L-213ENST00000421756 LONRF2Q1L5Z9 754 aa14.87□□□□□ -0.03
MCF2L-213ENST00000421756 PROCA1Q8NCQ7 364 aaPredicted RBP14.87□□□□□ -0.03
MCF2L-213ENST00000421756 ABCB6Q9NP58 842 aa14.87□□□□□ -0.03
MCF2L-213ENST00000421756 CDC23Q9UJX2 597 aa14.87□□□□□ -0.03
MCF2L-213ENST00000421756 TCP10L2B9ZVM9 353 aa14.87□□□□□ -0.03
MCF2L-213ENST00000421756 SMC1AQ14683 1233 aaKnown RBP14.87□□□□□ -0.03
MCF2L-213ENST00000421756 TERF2Q15554 542 aa14.87□□□□□ -0.03
MCF2L-213ENST00000421756 TTI2Q6NXR4 508 aa14.87□□□□□ -0.03
MCF2L-213ENST00000421756 CYP2W1Q8TAV3 490 aa14.87□□□□□ -0.03
MCF2L-213ENST00000421756 NHEJ1Q9H9Q4 299 aaPredicted RBP14.87□□□□□ -0.03
MCF2L-213ENST00000421756 KBTBD4Q9NVX7 518 aa14.87□□□□□ -0.03
MCF2L-213ENST00000421756 POTEFA5A3E0 1075 aa14.86□□□□□ -0.03
MCF2L-213ENST00000421756 LGALS16A8MUM7 142 aa14.86□□□□□ -0.03
MCF2L-213ENST00000421756 POTEIP0CG38 1075 aa14.86□□□□□ -0.03
MCF2L-213ENST00000421756 ZNF76P36508 570 aa14.86□□□□□ -0.03
MCF2L-213ENST00000421756 PBX1P40424 430 aa14.86□□□□□ -0.03
MCF2L-213ENST00000421756 LMAN1P49257 510 aa14.86□□□□□ -0.03
MCF2L-213ENST00000421756 PPP4CP60510 307 aa14.86□□□□□ -0.03
MCF2L-213ENST00000421756 VSNL1P62760 191 aa14.86□□□□□ -0.03
MCF2L-213ENST00000421756 POTEGQ6S5H5 508 aa14.86□□□□□ -0.03
MCF2L-213ENST00000421756 POTEEQ6S8J3 1075 aa14.86□□□□□ -0.03
MCF2L-213ENST00000421756 VPS18Q9P253 973 aa14.86□□□□□ -0.03
MCF2L-213ENST00000421756 NID2Q14112 1375 aa14.86□□□□□ -0.03
MCF2L-213ENST00000421756 HLA-DOAP06340 250 aa14.86□□□□□ -0.03
MCF2L-213ENST00000421756 EEF2P13639 858 aaKnown RBP14.86□□□□□ -0.03
MCF2L-213ENST00000421756 PLCG2P16885 1265 aa14.86□□□□□ -0.03
MCF2L-213ENST00000421756 SRGAP1Q7Z6B7 1085 aa14.86□□□□□ -0.03
MCF2L-213ENST00000421756 GIMAP8Q8ND71 665 aaPredicted RBP14.86□□□□□ -0.03
MCF2L-213ENST00000421756 NHSL1Q5SYE7 1610 aa14.86□□□□□ -0.03
MCF2L-213ENST00000421756 DDX39AO00148 427 aaKnown RBP14.86□□□□□ -0.03
MCF2L-213ENST00000421756 BBOX1O75936 387 aa14.86□□□□□ -0.03
MCF2L-213ENST00000421756 TTLL1O95922 423 aa14.86□□□□□ -0.03
MCF2L-213ENST00000421756 EPS15P42566 896 aa14.86□□□□□ -0.03
MCF2L-213ENST00000421756 SLC7A5Q01650 507 aa14.86□□□□□ -0.03
MCF2L-213ENST00000421756 CCDC174Q6PII3 467 aa14.86□□□□□ -0.03
MCF2L-213ENST00000421756 MIGA2Q7L4E1 593 aa14.86□□□□□ -0.03
MCF2L-213ENST00000421756 MYO6Q9UM54 1294 aa14.86□□□□□ -0.03
MCF2L-213ENST00000421756 ZBTB22O15209 634 aa14.85□□□□□ -0.03
MCF2L-213ENST00000421756 MOCS3O95396 460 aa14.85□□□□□ -0.03
MCF2L-213ENST00000421756 AMPD3Q01432 767 aa14.85□□□□□ -0.03
MCF2L-213ENST00000421756 WDR59Q6PJI9 974 aa14.85□□□□□ -0.03
MCF2L-213ENST00000421756 FNBP4Q8N3X1 1017 aaPredicted RBP14.85□□□□□ -0.03
MCF2L-213ENST00000421756 MMS19Q96T76 1030 aa14.85□□□□□ -0.03
MCF2L-213ENST00000421756 TBC1D8O95759 1140 aa14.85□□□□□ -0.03
MCF2L-213ENST00000421756 CCNE1P24864 410 aa14.85□□□□□ -0.03
MCF2L-213ENST00000421756 ARHGAP25P42331 645 aa14.85□□□□□ -0.03
MCF2L-213ENST00000421756 C2orf54Q08AI8 447 aa14.85□□□□□ -0.03
MCF2L-213ENST00000421756 SPA17Q15506 151 aa14.85□□□□□ -0.03
MCF2L-213ENST00000421756 SLF2Q8IX21 1173 aa14.85□□□□□ -0.03
MCF2L-213ENST00000421756 RIN2Q8WYP3 895 aaPredicted RBP14.85□□□□□ -0.03
MCF2L-213ENST00000421756 TEKT1Q969V4 418 aa14.85□□□□□ -0.03
MCF2L-213ENST00000421756 PNMA5Q96PV4 448 aa14.85□□□□□ -0.03
MCF2L-213ENST00000421756 GOLPH3Q9H4A6 298 aa14.85□□□□□ -0.03
MCF2L-213ENST00000421756 BLOC1S4Q9NUP1 217 aa14.85□□□□□ -0.03
MCF2L-213ENST00000421756 PACSIN2Q9UNF0 486 aaPredicted RBP14.85□□□□□ -0.03
MCF2L-213ENST00000421756 ECM29Q5VYK3 1845 aa14.85□□□□□ -0.03
MCF2L-213ENST00000421756 M0R2N6 131 aa14.85□□□□□ -0.03
MCF2L-213ENST00000421756 KSR1Q8IVT5 923 aa14.85□□□□□ -0.03
MCF2L-213ENST00000421756 VEZTQ9HBM0 779 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms