RNA–Protein interactions for RNA: ENST00000421722.5

PMS1-208, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2

Gene PMS1, Length 2,285 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-208ENST00000421722 H3BNC9 293 aa7.9□□□□□ -1.14
PMS1-208ENST00000421722 RAB11FIP3O75154 756 aa7.9□□□□□ -1.14
PMS1-208ENST00000421722 AMHP03971 560 aa7.9□□□□□ -1.14
PMS1-208ENST00000421722 IFIT2P09913 472 aaKnown RBP7.9□□□□□ -1.14
PMS1-208ENST00000421722 DEFB103AP81534 67 aa7.9□□□□□ -1.14
PMS1-208ENST00000421722 RCSD1Q6JBY9 416 aa7.9□□□□□ -1.14
PMS1-208ENST00000421722 BANK1Q8NDB2 785 aa7.9□□□□□ -1.14
PMS1-208ENST00000421722 SCFD2Q8WU76 684 aa7.9□□□□□ -1.14
PMS1-208ENST00000421722 TNNQ9UQP3 1299 aa7.9□□□□□ -1.14
PMS1-208ENST00000421722 PRUNE2Q8WUY3 3088 aa7.9□□□□□ -1.15
PMS1-208ENST00000421722 GNAT2P19087 354 aa7.9□□□□□ -1.15
PMS1-208ENST00000421722 PTK7Q13308 1070 aa7.9□□□□□ -1.15
PMS1-208ENST00000421722 SMAD4Q13485 552 aaKnown RBP7.9□□□□□ -1.15
PMS1-208ENST00000421722 PPP2R5BQ15173 497 aa7.9□□□□□ -1.15
PMS1-208ENST00000421722 SMAD2Q15796 467 aaKnown RBP7.9□□□□□ -1.15
PMS1-208ENST00000421722 SPRED2Q7Z698 418 aa7.9□□□□□ -1.15
PMS1-208ENST00000421722 CEP95Q96GE4 821 aa7.9□□□□□ -1.15
PMS1-208ENST00000421722 STRBPQ96SI9 672 aaKnown RBP7.9□□□□□ -1.15
PMS1-208ENST00000421722 EMSYQ7Z589 1322 aa7.9□□□□□ -1.15
PMS1-208ENST00000421722 CHD9Q3L8U1 2897 aa7.89□□□□□ -1.15
PMS1-208ENST00000421722 TMEM221A6NGB7 291 aa7.89□□□□□ -1.15
PMS1-208ENST00000421722 M0R296 226 aa7.89□□□□□ -1.15
PMS1-208ENST00000421722 LGR5O75473 907 aa7.89□□□□□ -1.15
PMS1-208ENST00000421722 ICAM1P05362 532 aa7.89□□□□□ -1.15
PMS1-208ENST00000421722 RB1P06400 928 aa7.89□□□□□ -1.15
PMS1-208ENST00000421722 EDNRBP24530 442 aa7.89□□□□□ -1.15
PMS1-208ENST00000421722 IRS1P35568 1242 aa7.89□□□□□ -1.15
PMS1-208ENST00000421722 MKRN4PQ13434 485 aaPredicted RBP7.89□□□□□ -1.15
PMS1-208ENST00000421722 GPM6BQ13491 265 aa7.89□□□□□ -1.15
PMS1-208ENST00000421722 MUM1L1Q5H9M0 696 aa7.89□□□□□ -1.15
PMS1-208ENST00000421722 TMEM63BQ5T3F8 832 aa7.89□□□□□ -1.15
PMS1-208ENST00000421722 RPAINQ86UA6 219 aa7.89□□□□□ -1.15
PMS1-208ENST00000421722 DNERQ8NFT8 737 aa7.89□□□□□ -1.15
PMS1-208ENST00000421722 FRAT1Q92837 279 aaPredicted RBP7.89□□□□□ -1.15
PMS1-208ENST00000421722 RANBP17Q9H2T7 1088 aaKnown RBP7.89□□□□□ -1.15
PMS1-208ENST00000421722 PIEZO1Q92508 2521 aa7.89□□□□□ -1.15
PMS1-208ENST00000421722 RALGAPA2Q2PPJ7 1873 aa7.89□□□□□ -1.15
PMS1-208ENST00000421722 GSG1L2A8MUP6 293 aa7.89□□□□□ -1.15
PMS1-208ENST00000421722 NBNO60934 754 aa7.89□□□□□ -1.15
PMS1-208ENST00000421722 CKBP12277 381 aa7.89□□□□□ -1.15
PMS1-208ENST00000421722 PDE4DQ08499 809 aa7.89□□□□□ -1.15
PMS1-208ENST00000421722 CTC1Q2NKJ3 1217 aa7.89□□□□□ -1.15
PMS1-208ENST00000421722 TRIM71Q2Q1W2 868 aaKnown RBP7.89□□□□□ -1.15
PMS1-208ENST00000421722 EPC2Q52LR7 807 aa7.89□□□□□ -1.15
PMS1-208ENST00000421722 TCEAL5Q5H9L2 206 aa7.89□□□□□ -1.15
PMS1-208ENST00000421722 BTNL9Q6UXG8 535 aa7.89□□□□□ -1.15
PMS1-208ENST00000421722 TRIM67Q6ZTA4 783 aa7.89□□□□□ -1.15
PMS1-208ENST00000421722 EEPD1Q7L9B9 569 aa7.89□□□□□ -1.15
PMS1-208ENST00000421722 DCAF4Q8WV16 495 aa7.89□□□□□ -1.15
PMS1-208ENST00000421722 DHX38Q92620 1227 aaKnown RBP7.89□□□□□ -1.15
PMS1-208ENST00000421722 CLUAP1Q96AJ1 413 aa7.89□□□□□ -1.15
PMS1-208ENST00000421722 C1orf115Q9H7X2 142 aa7.89□□□□□ -1.15
PMS1-208ENST00000421722 CCPG1Q9ULG6 757 aa7.89□□□□□ -1.15
PMS1-208ENST00000421722 PRR12Q9ULL5 1215 aa7.89□□□□□ -1.15
PMS1-208ENST00000421722 EXOC6BQ9Y2D4 811 aa7.89□□□□□ -1.15
PMS1-208ENST00000421722 MUC6Q6W4X9 2439 aa7.89□□□□□ -1.15
PMS1-208ENST00000421722 ZNF316A6NFI3 1004 aaPredicted RBP7.88□□□□□ -1.15
PMS1-208ENST00000421722 PROB1E7EW31 1015 aa7.88□□□□□ -1.15
PMS1-208ENST00000421722 MBTPS2O43462 519 aa7.88□□□□□ -1.15
PMS1-208ENST00000421722 SLC3A2P08195 630 aaKnown RBP7.88□□□□□ -1.15
PMS1-208ENST00000421722 PTGS1P23219 599 aa7.88□□□□□ -1.15
PMS1-208ENST00000421722 SLC1A4P43007 532 aa7.88□□□□□ -1.15
PMS1-208ENST00000421722 BAATQ14032 418 aaPredicted RBP7.88□□□□□ -1.15
PMS1-208ENST00000421722 GDF6Q6KF10 455 aaPredicted RBP7.88□□□□□ -1.15
PMS1-208ENST00000421722 NSMFQ6X4W1 530 aa7.88□□□□□ -1.15
PMS1-208ENST00000421722 ERMP1Q7Z2K6 904 aa7.88□□□□□ -1.15
PMS1-208ENST00000421722 RNF135Q8IUD6 432 aa7.88□□□□□ -1.15
PMS1-208ENST00000421722 SUGP1Q8IWZ8 645 aaKnown RBP7.88□□□□□ -1.15
PMS1-208ENST00000421722 RGS22Q8NE09 1264 aa7.88□□□□□ -1.15
PMS1-208ENST00000421722 CTAGE1Q96RT6 745 aa7.88□□□□□ -1.15
PMS1-208ENST00000421722 C17orf80Q9BSJ5 609 aa7.88□□□□□ -1.15
PMS1-208ENST00000421722 KATNAL1Q9BW62 490 aa7.88□□□□□ -1.15
PMS1-208ENST00000421722 IL1RAPL2Q9NP60 686 aa7.88□□□□□ -1.15
PMS1-208ENST00000421722 RWDD3Q9Y3V2 267 aa7.88□□□□□ -1.15
PMS1-208ENST00000421722 MINDY4BA8MYZ0 360 aa7.87□□□□□ -1.15
PMS1-208ENST00000421722 GFRA3O60609 400 aa7.87□□□□□ -1.15
PMS1-208ENST00000421722 GH1P01241 217 aa7.87□□□□□ -1.15
PMS1-208ENST00000421722 PDE4BQ07343 736 aa7.87□□□□□ -1.15
PMS1-208ENST00000421722 TCF15Q12870 199 aa7.87□□□□□ -1.15
PMS1-208ENST00000421722 IKQ13123 557 aaPredicted RBP7.87□□□□□ -1.15
PMS1-208ENST00000421722 TCTN1Q2MV58 587 aa7.87□□□□□ -1.15
PMS1-208ENST00000421722 TRAF7Q6Q0C0 670 aa7.87□□□□□ -1.15
PMS1-208ENST00000421722 TMEM192Q8IY95 271 aa7.87□□□□□ -1.15
PMS1-208ENST00000421722 FBXL6Q8N531 539 aa7.87□□□□□ -1.15
PMS1-208ENST00000421722 PUS7LQ9H0K6 701 aaKnown RBP7.87□□□□□ -1.15
PMS1-208ENST00000421722 GTF2IRD1Q9UHL9 959 aa7.87□□□□□ -1.15
PMS1-208ENST00000421722 KMT2EQ8IZD2 1858 aa7.87□□□□□ -1.15
PMS1-208ENST00000421722 DNAH12Q6ZR08 3092 aa7.87□□□□□ -1.15
PMS1-208ENST00000421722 C5orf67F2Z3F1 127 aa7.87□□□□□ -1.15
PMS1-208ENST00000421722 H3BQ06 376 aaPredicted RBP7.87□□□□□ -1.15
PMS1-208ENST00000421722 CAND2O75155 1236 aa7.87□□□□□ -1.15
PMS1-208ENST00000421722 MMP3P08254 477 aa7.87□□□□□ -1.15
PMS1-208ENST00000421722 TSPY3P0CV98 308 aa7.87□□□□□ -1.15
PMS1-208ENST00000421722 TSPY8P0CW00 308 aa7.87□□□□□ -1.15
PMS1-208ENST00000421722 CASTP20810 708 aaKnown RBP7.87□□□□□ -1.15
PMS1-208ENST00000421722 ZXDAP98168 799 aa7.87□□□□□ -1.15
PMS1-208ENST00000421722 CBX2Q14781 532 aaPredicted RBP7.87□□□□□ -1.15
PMS1-208ENST00000421722 PHOX2BQ99453 314 aa7.87□□□□□ -1.15
PMS1-208ENST00000421722 BOLA2Q9H3K6 86 aa7.87□□□□□ -1.15
PMS1-208ENST00000421722 CD207Q9UJ71 328 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms