RNA–Protein interactions for RNA: ENST00000421496.5

GGCX-202, Transcript of gamma-glutamyl carboxylase, humanhuman

TSL 4

Gene GGCX, Length 540 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGCX-202ENST00000421496 TMEM39AQ9NV64 488 aa13.2□□□□□ -0.3
GGCX-202ENST00000421496 Q9Y3F1 56 aa13.2□□□□□ -0.3
GGCX-202ENST00000421496 LTBP2Q14767 1821 aa13.19□□□□□ -0.3
GGCX-202ENST00000421496 PNMA6FA0A0J9YX94 578 aa13.19□□□□□ -0.3
GGCX-202ENST00000421496 A0A0U1RQG5 324 aaPredicted RBP13.19□□□□□ -0.3
GGCX-202ENST00000421496 CCDC69A6NI79 296 aa13.19□□□□□ -0.3
GGCX-202ENST00000421496 ARVCFO00192 962 aa13.19□□□□□ -0.3
GGCX-202ENST00000421496 SH2B2O14492 632 aaPredicted RBP13.19□□□□□ -0.3
GGCX-202ENST00000421496 ZEB2O60315 1214 aa13.19□□□□□ -0.3
GGCX-202ENST00000421496 TXNP10599 105 aaKnown RBP13.19□□□□□ -0.3
GGCX-202ENST00000421496 CDK7P50613 346 aa13.19□□□□□ -0.3
GGCX-202ENST00000421496 ARHGEF16Q5VV41 709 aa13.19□□□□□ -0.3
GGCX-202ENST00000421496 CTCFLQ8NI51 663 aaPredicted RBP13.19□□□□□ -0.3
GGCX-202ENST00000421496 LRCH3Q96II8 777 aa13.19□□□□□ -0.3
GGCX-202ENST00000421496 MAP3K14Q99558 947 aa13.19□□□□□ -0.3
GGCX-202ENST00000421496 KIAA0355O15063 1070 aa13.18□□□□□ -0.3
GGCX-202ENST00000421496 DDAH1O94760 285 aa13.18□□□□□ -0.3
GGCX-202ENST00000421496 RAG1P15918 1043 aa13.18□□□□□ -0.3
GGCX-202ENST00000421496 EIF2AK2P19525 551 aaKnown RBP13.18□□□□□ -0.3
GGCX-202ENST00000421496 RXRAP19793 462 aa13.18□□□□□ -0.3
GGCX-202ENST00000421496 ITGB8P26012 769 aa13.18□□□□□ -0.3
GGCX-202ENST00000421496 HOXA13P31271 388 aaPredicted RBP13.18□□□□□ -0.3
GGCX-202ENST00000421496 KIF5BP33176 963 aa13.18□□□□□ -0.3
GGCX-202ENST00000421496 LIFRP42702 1097 aa13.18□□□□□ -0.3
GGCX-202ENST00000421496 HSD17B4P51659 736 aa13.18□□□□□ -0.3
GGCX-202ENST00000421496 TRAF1Q13077 416 aa13.18□□□□□ -0.3
GGCX-202ENST00000421496 PPP2R5BQ15173 497 aa13.18□□□□□ -0.3
GGCX-202ENST00000421496 STXBP2Q15833 593 aa13.18□□□□□ -0.3
GGCX-202ENST00000421496 SEPT14Q6ZU15 432 aa13.18□□□□□ -0.3
GGCX-202ENST00000421496 RAB11FIP4Q86YS3 637 aa13.18□□□□□ -0.3
GGCX-202ENST00000421496 OR6J1Q8NGC5 347 aa13.18□□□□□ -0.3
GGCX-202ENST00000421496 SCFD2Q8WU76 684 aa13.18□□□□□ -0.3
GGCX-202ENST00000421496 COPS5Q92905 334 aa13.18□□□□□ -0.3
GGCX-202ENST00000421496 NEK1Q96PY6 1258 aa13.18□□□□□ -0.3
GGCX-202ENST00000421496 IWS1Q96ST2 819 aa13.18□□□□□ -0.3
GGCX-202ENST00000421496 MROH7Q68CQ1 1323 aa13.17□□□□□ -0.3
GGCX-202ENST00000421496 CABYRO75952 493 aa13.17□□□□□ -0.3
GGCX-202ENST00000421496 NR3C2P08235 984 aa13.17□□□□□ -0.3
GGCX-202ENST00000421496 ITGA7Q13683 1181 aa13.17□□□□□ -0.3
GGCX-202ENST00000421496 TTLL4Q14679 1199 aa13.17□□□□□ -0.3
GGCX-202ENST00000421496 ADCK5Q3MIX3 580 aa13.17□□□□□ -0.3
GGCX-202ENST00000421496 LRIT3Q3SXY7 679 aa13.17□□□□□ -0.3
GGCX-202ENST00000421496 RASEFQ8IZ41 740 aa13.17□□□□□ -0.3
GGCX-202ENST00000421496 CMTR1Q8N1G2 835 aaKnown RBP13.17□□□□□ -0.3
GGCX-202ENST00000421496 SRBD1Q8N5C6 995 aaKnown RBP13.17□□□□□ -0.3
GGCX-202ENST00000421496 PXMP2Q9NR77 195 aa13.17□□□□□ -0.3
GGCX-202ENST00000421496 MAP3K20Q9NYL2 800 aaKnown RBP13.17□□□□□ -0.3
GGCX-202ENST00000421496 SLC12A7Q9Y666 1083 aa13.17□□□□□ -0.3
GGCX-202ENST00000421496 GRIN2DO15399 1336 aa13.16□□□□□ -0.3
GGCX-202ENST00000421496 GCOM1H8Y6P7 765 aaPredicted RBP13.16□□□□□ -0.3
GGCX-202ENST00000421496 NKRFO15226 690 aaKnown RBP eCLIP13.16□□□□□ -0.3
GGCX-202ENST00000421496 ARIH2O95376 493 aa13.16□□□□□ -0.3
GGCX-202ENST00000421496 PLEKHA8P1O95397 391 aa13.16□□□□□ -0.3
GGCX-202ENST00000421496 MYL3P08590 195 aa13.16□□□□□ -0.3
GGCX-202ENST00000421496 POLR2MP0CAP2 368 aa13.16□□□□□ -0.3
GGCX-202ENST00000421496 CALM1P0DP23 149 aa13.16□□□□□ -0.3
GGCX-202ENST00000421496 CALM2P0DP24 149 aa13.16□□□□□ -0.3
GGCX-202ENST00000421496 CALM3P0DP25 149 aa13.16□□□□□ -0.3
GGCX-202ENST00000421496 MYCLP12524 364 aaPredicted RBP13.16□□□□□ -0.3
GGCX-202ENST00000421496 CPT1AP50416 773 aa13.16□□□□□ -0.3
GGCX-202ENST00000421496 PSMC6P62333 389 aa13.16□□□□□ -0.3
GGCX-202ENST00000421496 GHRHRQ02643 423 aa13.16□□□□□ -0.3
GGCX-202ENST00000421496 SHHQ15465 462 aa13.16□□□□□ -0.3
GGCX-202ENST00000421496 LY6KQ17RY6 165 aa13.16□□□□□ -0.3
GGCX-202ENST00000421496 TSGA10IPQ3SY00 556 aa13.16□□□□□ -0.3
GGCX-202ENST00000421496 CCDC62Q6P9F0 684 aa13.16□□□□□ -0.3
GGCX-202ENST00000421496 FCHSD1Q86WN1 690 aa13.16□□□□□ -0.3
GGCX-202ENST00000421496 CCDC82Q8N4S0 544 aa13.16□□□□□ -0.3
GGCX-202ENST00000421496 SLC43A3Q8NBI5 491 aa13.16□□□□□ -0.3
GGCX-202ENST00000421496 RRP36Q96EU6 259 aaKnown RBP13.16□□□□□ -0.3
GGCX-202ENST00000421496 TCEANC2Q96MN5 208 aa13.16□□□□□ -0.3
GGCX-202ENST00000421496 SPZ1Q9BXG8 430 aa13.16□□□□□ -0.3
GGCX-202ENST00000421496 MYO9BQ13459 2157 aa13.15□□□□□ -0.3
GGCX-202ENST00000421496 TLR3O15455 904 aaKnown RBP13.15□□□□□ -0.3
GGCX-202ENST00000421496 EIF3JO75822 258 aaKnown RBP13.15□□□□□ -0.3
GGCX-202ENST00000421496 TIMP1P01033 207 aa13.15□□□□□ -0.3
GGCX-202ENST00000421496 SMARCA1P28370 1054 aa13.15□□□□□ -0.3
GGCX-202ENST00000421496 GNAQP50148 359 aa13.15□□□□□ -0.3
GGCX-202ENST00000421496 PURAQ00577 322 aaKnown RBP13.15□□□□□ -0.3
GGCX-202ENST00000421496 EXOSC10Q01780 885 aaKnown RBP13.15□□□□□ -0.3
GGCX-202ENST00000421496 BRDTQ58F21 947 aaPredicted RBP13.15□□□□□ -0.3
GGCX-202ENST00000421496 C9orf50Q5SZB4 431 aa13.15□□□□□ -0.3
GGCX-202ENST00000421496 SYNE3Q6ZMZ3 975 aa13.15□□□□□ -0.3
GGCX-202ENST00000421496 DHX32Q7L7V1 743 aaKnown RBP13.15□□□□□ -0.3
GGCX-202ENST00000421496 FAM126BQ8IXS8 530 aa13.15□□□□□ -0.3
GGCX-202ENST00000421496 SAMD3Q8N6K7 520 aa13.15□□□□□ -0.3
GGCX-202ENST00000421496 FANCBQ8NB91 859 aa13.15□□□□□ -0.3
GGCX-202ENST00000421496 ZFP91Q96JP5 570 aaPredicted RBP13.15□□□□□ -0.3
GGCX-202ENST00000421496 LZTS2Q9BRK4 669 aa13.15□□□□□ -0.3
GGCX-202ENST00000421496 PDCD2LQ9BRP1 358 aa13.15□□□□□ -0.3
GGCX-202ENST00000421496 POLR3EQ9NVU0 708 aa13.15□□□□□ -0.3
GGCX-202ENST00000421496 SEC63Q9UGP8 760 aaKnown RBP13.15□□□□□ -0.3
GGCX-202ENST00000421496 TBX21Q9UL17 535 aa13.15□□□□□ -0.3
GGCX-202ENST00000421496 TRIP12Q14669 1992 aaPredicted RBP13.14□□□□□ -0.31
GGCX-202ENST00000421496 hCG_1642624A0A1W2PR95 340 aa13.14□□□□□ -0.31
GGCX-202ENST00000421496 A6NJR5 290 aa13.14□□□□□ -0.31
GGCX-202ENST00000421496 CD4P01730 458 aa13.14□□□□□ -0.31
GGCX-202ENST00000421496 EPHB4P54760 987 aa13.14□□□□□ -0.31
GGCX-202ENST00000421496 KRT32Q14532 448 aa13.14□□□□□ -0.31
GGCX-202ENST00000421496 VSIG10LQ86VR7 867 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms