RNA–Protein interactions for RNA: ENST00000420717.5

PTPN18-204, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-204ENST00000420717 PIBF1Q8WXW3 757 aa16.62■□□□□ 0.25
PTPN18-204ENST00000420717 GPKOWQ92917 476 aaPredicted RBP eCLIP16.62■□□□□ 0.25
PTPN18-204ENST00000420717 GTF3C6Q969F1 213 aa16.62■□□□□ 0.25
PTPN18-204ENST00000420717 TAAR1Q96RJ0 339 aa16.62■□□□□ 0.25
PTPN18-204ENST00000420717 RMDN3Q96TC7 470 aa16.62■□□□□ 0.25
PTPN18-204ENST00000420717 GLT8D2Q9H1C3 349 aa16.62■□□□□ 0.25
PTPN18-204ENST00000420717 hCG_1642624A0A1W2PR95 340 aa16.61■□□□□ 0.25
PTPN18-204ENST00000420717 ME3Q16798 604 aa16.61■□□□□ 0.25
PTPN18-204ENST00000420717 TAPT1Q6NXT6 567 aa16.61■□□□□ 0.25
PTPN18-204ENST00000420717 CPLX2Q6PUV4 134 aaKnown RBP16.61■□□□□ 0.25
PTPN18-204ENST00000420717 PHKBQ93100 1093 aa16.61■□□□□ 0.25
PTPN18-204ENST00000420717 PDCD2LQ9BRP1 358 aa16.61■□□□□ 0.25
PTPN18-204ENST00000420717 ZMYND12Q9H0C1 365 aa16.61■□□□□ 0.25
PTPN18-204ENST00000420717 UPF3AQ9H1J1 476 aaKnown RBP16.61■□□□□ 0.25
PTPN18-204ENST00000420717 SLKQ9H2G2 1235 aaPredicted RBP16.61■□□□□ 0.25
PTPN18-204ENST00000420717 RIC8AQ9NPQ8 531 aa16.61■□□□□ 0.25
PTPN18-204ENST00000420717 SH3GLB2Q9NR46 395 aa16.61■□□□□ 0.25
PTPN18-204ENST00000420717 FAM184BQ9ULE4 1060 aa16.61■□□□□ 0.25
PTPN18-204ENST00000420717 TNRC18O15417 2968 aaPredicted RBP16.61■□□□□ 0.25
PTPN18-204ENST00000420717 MKI67P46013 3256 aaKnown RBP16.6■□□□□ 0.25
PTPN18-204ENST00000420717 CPLX1O14810 134 aa16.6■□□□□ 0.25
PTPN18-204ENST00000420717 ADCY6O43306 1168 aa16.6■□□□□ 0.25
PTPN18-204ENST00000420717 DUSP11O75319 330 aaKnown RBP16.6■□□□□ 0.25
PTPN18-204ENST00000420717 DEXIO95424 95 aa16.6■□□□□ 0.25
PTPN18-204ENST00000420717 CST5P28325 142 aaPredicted RBP16.6■□□□□ 0.25
PTPN18-204ENST00000420717 HOXA13P31271 388 aaPredicted RBP16.6■□□□□ 0.25
PTPN18-204ENST00000420717 NAPAP54920 295 aa16.6■□□□□ 0.25
PTPN18-204ENST00000420717 PDE4DQ08499 809 aa16.6■□□□□ 0.25
PTPN18-204ENST00000420717 CCDC144BQ3MJ40 725 aa16.6■□□□□ 0.25
PTPN18-204ENST00000420717 TRIM22Q8IYM9 498 aa16.6■□□□□ 0.25
PTPN18-204ENST00000420717 CCDC12Q8WUD4 166 aaPredicted RBP16.6■□□□□ 0.25
PTPN18-204ENST00000420717 CUL5Q93034 780 aa16.6■□□□□ 0.25
PTPN18-204ENST00000420717 PSTPIP2Q9H939 334 aa16.6■□□□□ 0.25
PTPN18-204ENST00000420717 ZHX1Q9UKY1 873 aaPredicted RBP16.6■□□□□ 0.25
PTPN18-204ENST00000420717 Q9Y3F1 56 aa16.6■□□□□ 0.25
PTPN18-204ENST00000420717 DNM1LO00429 736 aa16.59■□□□□ 0.25
PTPN18-204ENST00000420717 ADAMTS4O75173 837 aa16.59■□□□□ 0.25
PTPN18-204ENST00000420717 STAM2O75886 525 aa16.59■□□□□ 0.25
PTPN18-204ENST00000420717 LARGE1O95461 756 aa16.59■□□□□ 0.25
PTPN18-204ENST00000420717 RARBP10826 455 aa16.59■□□□□ 0.25
PTPN18-204ENST00000420717 COL6A1P12109 1028 aa16.59■□□□□ 0.25
PTPN18-204ENST00000420717 CNGA1P29973 690 aa16.59■□□□□ 0.25
PTPN18-204ENST00000420717 CLK2P49760 499 aaKnown RBP16.59■□□□□ 0.25
PTPN18-204ENST00000420717 PGM5Q15124 567 aa16.59■□□□□ 0.25
PTPN18-204ENST00000420717 ARHGEF16Q5VV41 709 aa16.59■□□□□ 0.25
PTPN18-204ENST00000420717 IQSEC1Q6DN90 963 aa16.59■□□□□ 0.25
PTPN18-204ENST00000420717 XRRA1Q6P2D8 792 aa16.59■□□□□ 0.25
PTPN18-204ENST00000420717 VSIG10LQ86VR7 867 aa16.59■□□□□ 0.25
PTPN18-204ENST00000420717 FBXO16Q8IX29 292 aaPredicted RBP16.59■□□□□ 0.25
PTPN18-204ENST00000420717 CCDC148Q8NFR7 591 aa16.59■□□□□ 0.25
PTPN18-204ENST00000420717 LARP6Q9BRS8 491 aaKnown RBP16.59■□□□□ 0.25
PTPN18-204ENST00000420717 SLC26A6Q9BXS9 759 aa16.59■□□□□ 0.25
PTPN18-204ENST00000420717 LIMCH1Q9UPQ0 1083 aa16.59■□□□□ 0.25
PTPN18-204ENST00000420717 GNEQ9Y223 722 aaKnown RBP16.59■□□□□ 0.25
PTPN18-204ENST00000420717 CAPN15O75808 1086 aa16.58■□□□□ 0.24
PTPN18-204ENST00000420717 EIF3JO75822 258 aaKnown RBP16.58■□□□□ 0.24
PTPN18-204ENST00000420717 FARP2O94887 1054 aaPredicted RBP16.58■□□□□ 0.24
PTPN18-204ENST00000420717 CTDNEP1O95476 244 aa16.58■□□□□ 0.24
PTPN18-204ENST00000420717 NR3C2P08235 984 aa16.58■□□□□ 0.24
PTPN18-204ENST00000420717 EIF2AK2P19525 551 aaKnown RBP16.58■□□□□ 0.24
PTPN18-204ENST00000420717 ADCY7P51828 1080 aa16.58■□□□□ 0.24
PTPN18-204ENST00000420717 AKAP17AQ02040 695 aaKnown RBP16.58■□□□□ 0.24
PTPN18-204ENST00000420717 SSRP1Q08945 709 aaKnown RBP16.58■□□□□ 0.24
PTPN18-204ENST00000420717 ST3GAL1Q11201 340 aa16.58■□□□□ 0.24
PTPN18-204ENST00000420717 STK3Q13188 491 aa16.58■□□□□ 0.24
PTPN18-204ENST00000420717 AP3B2Q13367 1082 aa16.58■□□□□ 0.24
PTPN18-204ENST00000420717 STXBP2Q15833 593 aa16.58■□□□□ 0.24
PTPN18-204ENST00000420717 MCTP2Q6DN12 878 aa16.58■□□□□ 0.24
PTPN18-204ENST00000420717 USP17L6PQ6QN14 398 aa16.58■□□□□ 0.24
PTPN18-204ENST00000420717 SCFD2Q8WU76 684 aa16.58■□□□□ 0.24
PTPN18-204ENST00000420717 DDX49Q9Y6V7 483 aaKnown RBP16.58■□□□□ 0.24
PTPN18-204ENST00000420717 SYNRGQ9UMZ2 1314 aa16.58■□□□□ 0.24
PTPN18-204ENST00000420717 ALPK3Q96L96 1907 aa16.58■□□□□ 0.24
PTPN18-204ENST00000420717 NKRFO15226 690 aaKnown RBP eCLIP16.57■□□□□ 0.24
PTPN18-204ENST00000420717 TFRCP02786 760 aaKnown RBP16.57■□□□□ 0.24
PTPN18-204ENST00000420717 GJA9P57773 515 aa16.57■□□□□ 0.24
PTPN18-204ENST00000420717 DUSP28Q4G0W2 176 aa16.57■□□□□ 0.24
PTPN18-204ENST00000420717 PCNX4Q63HM2 1172 aa16.57■□□□□ 0.24
PTPN18-204ENST00000420717 CCDC62Q6P9F0 684 aa16.57■□□□□ 0.24
PTPN18-204ENST00000420717 ARRDC4Q8NCT1 418 aa16.57■□□□□ 0.24
PTPN18-204ENST00000420717 NSUN7Q8NE18 718 aaKnown RBP16.57■□□□□ 0.24
PTPN18-204ENST00000420717 KLHDC9Q8NEP7 349 aa16.57■□□□□ 0.24
PTPN18-204ENST00000420717 IL31RAQ8NI17 732 aa16.57■□□□□ 0.24
PTPN18-204ENST00000420717 SMARCC2Q8TAQ2 1214 aa16.57■□□□□ 0.24
PTPN18-204ENST00000420717 ZSCAN31Q96LW9 406 aaPredicted RBP16.57■□□□□ 0.24
PTPN18-204ENST00000420717 XPNPEP3Q9NQH7 507 aa16.57■□□□□ 0.24
PTPN18-204ENST00000420717 SH2B1Q9NRF2 756 aaPredicted RBP16.57■□□□□ 0.24
PTPN18-204ENST00000420717 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.56■□□□□ 0.24
PTPN18-204ENST00000420717 SMCO2A6NFE2 343 aa16.56■□□□□ 0.24
PTPN18-204ENST00000420717 CTAGE5O15320 804 aa16.56■□□□□ 0.24
PTPN18-204ENST00000420717 ST18O60284 1047 aa16.56■□□□□ 0.24
PTPN18-204ENST00000420717 RGS20O76081 388 aa16.56■□□□□ 0.24
PTPN18-204ENST00000420717 FOSP01100 380 aaPredicted RBP16.56■□□□□ 0.24
PTPN18-204ENST00000420717 SMPD1P17405 629 aa16.56■□□□□ 0.24
PTPN18-204ENST00000420717 CCND2P30279 289 aa16.56■□□□□ 0.24
PTPN18-204ENST00000420717 ADCYAP1R1P41586 468 aa16.56■□□□□ 0.24
PTPN18-204ENST00000420717 TNFAIP2Q03169 654 aa16.56■□□□□ 0.24
PTPN18-204ENST00000420717 LRRC41Q15345 812 aa16.56■□□□□ 0.24
PTPN18-204ENST00000420717 CCSAPQ6IQ19 270 aaPredicted RBP16.56■□□□□ 0.24
PTPN18-204ENST00000420717 DAGLBQ8NCG7 672 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms