RNA–Protein interactions for RNA: ENST00000420503.1

LINC00339-203, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-203ENST00000420503 MTCH2Q9Y6C9 303 aa15.18■□□□□ 0.02
LINC00339-203ENST00000420503 NEDD4P46934 1319 aa15.17■□□□□ 0.02
LINC00339-203ENST00000420503 LCHNA4D1U4 455 aa15.17■□□□□ 0.02
LINC00339-203ENST00000420503 IQCF3P0C7M6 154 aa15.17■□□□□ 0.02
LINC00339-203ENST00000420503 TAP1Q03518 808 aa15.17■□□□□ 0.02
LINC00339-203ENST00000420503 PDE4DQ08499 809 aa15.17■□□□□ 0.02
LINC00339-203ENST00000420503 ZNF543Q08ER8 600 aa15.17■□□□□ 0.02
LINC00339-203ENST00000420503 NMIQ13287 307 aaPredicted RBP15.17■□□□□ 0.02
LINC00339-203ENST00000420503 PPP2R5BQ15173 497 aa15.17■□□□□ 0.02
LINC00339-203ENST00000420503 SKIV2LQ15477 1246 aaKnown RBP15.17■□□□□ 0.02
LINC00339-203ENST00000420503 TMEM67Q5HYA8 995 aa15.17■□□□□ 0.02
LINC00339-203ENST00000420503 ARNTL2Q8WYA1 636 aa15.17■□□□□ 0.02
LINC00339-203ENST00000420503 DHX38Q92620 1227 aaKnown RBP15.17■□□□□ 0.02
LINC00339-203ENST00000420503 UBA5Q9GZZ9 404 aa15.17■□□□□ 0.02
LINC00339-203ENST00000420503 POLR3EQ9NVU0 708 aa15.17■□□□□ 0.02
LINC00339-203ENST00000420503 ADD3Q9UEY8 706 aaKnown RBP15.17■□□□□ 0.02
LINC00339-203ENST00000420503 TXNP10599 105 aaKnown RBP15.16■□□□□ 0.02
LINC00339-203ENST00000420503 HSPD1P10809 573 aaKnown RBP15.16■□□□□ 0.02
LINC00339-203ENST00000420503 CPT1AP50416 773 aa15.16■□□□□ 0.02
LINC00339-203ENST00000420503 ALX1Q15699 326 aa15.16■□□□□ 0.02
LINC00339-203ENST00000420503 ANKRD45Q5TZF3 282 aa15.16■□□□□ 0.02
LINC00339-203ENST00000420503 A6NJR5 290 aa15.15■□□□□ 0.02
LINC00339-203ENST00000420503 LPXNO60711 386 aa15.15■□□□□ 0.02
LINC00339-203ENST00000420503 SNHG28P0DPA3 235 aa15.15■□□□□ 0.02
LINC00339-203ENST00000420503 PDE1AP54750 535 aa15.15■□□□□ 0.02
LINC00339-203ENST00000420503 LY6KQ17RY6 165 aa15.15■□□□□ 0.02
LINC00339-203ENST00000420503 GDF6Q6KF10 455 aaPredicted RBP15.15■□□□□ 0.02
LINC00339-203ENST00000420503 HERC6Q8IVU3 1022 aa15.15■□□□□ 0.02
LINC00339-203ENST00000420503 AFG1LQ8WV93 481 aa15.15■□□□□ 0.02
LINC00339-203ENST00000420503 KAT2BQ92831 832 aa15.15■□□□□ 0.02
LINC00339-203ENST00000420503 KHSRPQ92945 711 aaKnown RBP eCLIP15.15■□□□□ 0.02
LINC00339-203ENST00000420503 WNT8BQ93098 351 aa15.15■□□□□ 0.02
LINC00339-203ENST00000420503 EVI5LQ96CN4 794 aa15.15■□□□□ 0.02
LINC00339-203ENST00000420503 FTOQ9C0B1 505 aaKnown RBP eCLIP15.15■□□□□ 0.02
LINC00339-203ENST00000420503 SORBS3O60504 671 aa15.14■□□□□ 0.01
LINC00339-203ENST00000420503 SUPT20HL2P0C7V6 817 aa15.14■□□□□ 0.01
LINC00339-203ENST00000420503 DEFB103AP81534 67 aa15.14■□□□□ 0.01
LINC00339-203ENST00000420503 GRB10Q13322 594 aa15.14■□□□□ 0.01
LINC00339-203ENST00000420503 PPP4R3BQ5MIZ7 849 aa15.14■□□□□ 0.01
LINC00339-203ENST00000420503 CCDC62Q6P9F0 684 aa15.14■□□□□ 0.01
LINC00339-203ENST00000420503 SEPT14Q6ZU15 432 aa15.14■□□□□ 0.01
LINC00339-203ENST00000420503 CHST3Q7LGC8 479 aa15.14■□□□□ 0.01
LINC00339-203ENST00000420503 SCFD2Q8WU76 684 aa15.14■□□□□ 0.01
LINC00339-203ENST00000420503 TAAR1Q96RJ0 339 aa15.14■□□□□ 0.01
LINC00339-203ENST00000420503 CRBNQ96SW2 442 aa15.14■□□□□ 0.01
LINC00339-203ENST00000420503 EPHX3Q9H6B9 360 aa15.14■□□□□ 0.01
LINC00339-203ENST00000420503 GPHNQ9NQX3 736 aaPredicted RBP15.14■□□□□ 0.01
LINC00339-203ENST00000420503 HELLSQ9NRZ9 838 aa15.14■□□□□ 0.01
LINC00339-203ENST00000420503 TCP11L1Q9NUJ3 509 aa15.14■□□□□ 0.01
LINC00339-203ENST00000420503 PFKMP08237 780 aa15.13■□□□□ 0.01
LINC00339-203ENST00000420503 MMP3P08254 477 aa15.13■□□□□ 0.01
LINC00339-203ENST00000420503 ARHGAP1Q07960 439 aa15.13■□□□□ 0.01
LINC00339-203ENST00000420503 HIC1Q14526 733 aa15.13■□□□□ 0.01
LINC00339-203ENST00000420503 PTGISQ16647 500 aa15.13■□□□□ 0.01
LINC00339-203ENST00000420503 MCMDC2Q4G0Z9 681 aa15.13■□□□□ 0.01
LINC00339-203ENST00000420503 NFRKBQ6P4R8 1299 aa15.13■□□□□ 0.01
LINC00339-203ENST00000420503 IL27Q8NEV9 243 aa15.13■□□□□ 0.01
LINC00339-203ENST00000420503 GDPD5Q8WTR4 605 aa15.13■□□□□ 0.01
LINC00339-203ENST00000420503 SEZ6LQ9BYH1 1024 aa15.13■□□□□ 0.01
LINC00339-203ENST00000420503 KIAA1217Q5T5P2 1943 aa15.13■□□□□ 0.01
LINC00339-203ENST00000420503 WDR19Q8NEZ3 1342 aa15.13■□□□□ 0.01
LINC00339-203ENST00000420503 MYH6P13533 1939 aa15.12■□□□□ 0.01
LINC00339-203ENST00000420503 ZNF200P98182 395 aaPredicted RBP15.12■□□□□ 0.01
LINC00339-203ENST00000420503 CDC37Q16543 378 aaPredicted RBP15.12■□□□□ 0.01
LINC00339-203ENST00000420503 SYTL5Q8TDW5 730 aaPredicted RBP15.12■□□□□ 0.01
LINC00339-203ENST00000420503 SLC9A7Q96T83 725 aa15.12■□□□□ 0.01
LINC00339-203ENST00000420503 MTUS1Q9ULD2 1270 aa15.12■□□□□ 0.01
LINC00339-203ENST00000420503 CCDC171Q6TFL3 1326 aa15.12■□□□□ 0.01
LINC00339-203ENST00000420503 LAMA4Q16363 1823 aa15.11■□□□□ 0.01
LINC00339-203ENST00000420503 PITPNM1O00562 1244 aa15.11■□□□□ 0.01
LINC00339-203ENST00000420503 NBNO60934 754 aa15.11■□□□□ 0.01
LINC00339-203ENST00000420503 ZNF286BP0CG31 522 aa15.11■□□□□ 0.01
LINC00339-203ENST00000420503 ACTN1P12814 892 aa15.11■□□□□ 0.01
LINC00339-203ENST00000420503 WDR5P61964 334 aaKnown RBP15.11■□□□□ 0.01
LINC00339-203ENST00000420503 TRAF7Q6Q0C0 670 aa15.11■□□□□ 0.01
LINC00339-203ENST00000420503 RETREG2Q8NC44 543 aa15.11■□□□□ 0.01
LINC00339-203ENST00000420503 ZFP91Q96JP5 570 aaPredicted RBP15.11■□□□□ 0.01
LINC00339-203ENST00000420503 CD320Q9NPF0 282 aa15.11■□□□□ 0.01
LINC00339-203ENST00000420503 NOD1Q9Y239 953 aa15.11■□□□□ 0.01
LINC00339-203ENST00000420503 MYH7BA7E2Y1 1941 aa15.11■□□□□ 0.01
LINC00339-203ENST00000420503 LOC102724159A0A0B4J2E5 919 aa15.1■□□□□ 0.01
LINC00339-203ENST00000420503 NKRFO15226 690 aaKnown RBP eCLIP15.1■□□□□ 0.01
LINC00339-203ENST00000420503 TLL1O43897 1013 aa15.1■□□□□ 0.01
LINC00339-203ENST00000420503 EIF2AK2P19525 551 aaKnown RBP15.1■□□□□ 0.01
LINC00339-203ENST00000420503 POU3F3P20264 500 aaPredicted RBP15.1■□□□□ 0.01
LINC00339-203ENST00000420503 RFC2P35250 354 aa15.1■□□□□ 0.01
LINC00339-203ENST00000420503 MBTPS1Q14703 1052 aa15.1■□□□□ 0.01
LINC00339-203ENST00000420503 PWP2Q15269 919 aaKnown RBP15.1■□□□□ 0.01
LINC00339-203ENST00000420503 FAM117BQ6P1L5 589 aa15.1■□□□□ 0.01
LINC00339-203ENST00000420503 MFSD6Q6ZSS7 791 aa15.1■□□□□ 0.01
LINC00339-203ENST00000420503 DNERQ8NFT8 737 aa15.1■□□□□ 0.01
LINC00339-203ENST00000420503 ALG1Q9BT22 464 aa15.1■□□□□ 0.01
LINC00339-203ENST00000420503 LNPKQ9C0E8 428 aa15.1■□□□□ 0.01
LINC00339-203ENST00000420503 HDAC6Q9UBN7 1215 aa15.1■□□□□ 0.01
LINC00339-203ENST00000420503 MYO7AQ13402 2215 aa15.1■□□□□ 0.01
LINC00339-203ENST00000420503 RAD50Q92878 1312 aa15.1■□□□□ 0.01
LINC00339-203ENST00000420503 OPLAHO14841 1288 aa15.09■□□□□ 0.01
LINC00339-203ENST00000420503 GTPBP6O43824 516 aaPredicted RBP15.09■□□□□ 0.01
LINC00339-203ENST00000420503 KDM4AO75164 1064 aa15.09■□□□□ 0.01
LINC00339-203ENST00000420503 RRP1P56182 461 aaKnown RBP15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms