RNA–Protein interactions for RNA: ENST00000420047.1

SEMA3A-202, Transcript of semaphorin 3A, humanhuman

TSL 4

Gene SEMA3A, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3A-202ENST00000420047 ASGR2P07307 311 aa5.54□□□□□ -1.52
SEMA3A-202ENST00000420047 CRKP46108 304 aa5.54□□□□□ -1.52
SEMA3A-202ENST00000420047 ANKRD39Q53RE8 183 aa5.54□□□□□ -1.52
SEMA3A-202ENST00000420047 CPZQ66K79 652 aa5.54□□□□□ -1.52
SEMA3A-202ENST00000420047 GK5Q6ZS86 529 aa5.54□□□□□ -1.52
SEMA3A-202ENST00000420047 SND1Q7KZF4 910 aaKnown RBP eCLIP5.54□□□□□ -1.52
SEMA3A-202ENST00000420047 DDX1Q92499 740 aaKnown RBP5.54□□□□□ -1.52
SEMA3A-202ENST00000420047 SAMD11Q96NU1 681 aa5.54□□□□□ -1.52
SEMA3A-202ENST00000420047 SLC9A7Q96T83 725 aa5.54□□□□□ -1.52
SEMA3A-202ENST00000420047 COPRSQ9NQ92 184 aa5.54□□□□□ -1.52
SEMA3A-202ENST00000420047 PLCH2O75038 1416 aa5.54□□□□□ -1.52
SEMA3A-202ENST00000420047 NEO1Q92859 1461 aa5.53□□□□□ -1.52
SEMA3A-202ENST00000420047 MATN3O15232 486 aa5.53□□□□□ -1.52
SEMA3A-202ENST00000420047 SHOXO15266 292 aa5.53□□□□□ -1.52
SEMA3A-202ENST00000420047 SUV39H1O43463 412 aa5.53□□□□□ -1.52
SEMA3A-202ENST00000420047 SARSP49591 514 aaKnown RBP5.53□□□□□ -1.52
SEMA3A-202ENST00000420047 SEZ6Q53EL9 994 aa5.53□□□□□ -1.52
SEMA3A-202ENST00000420047 CCDC144CPQ8IYA2 1237 aa5.53□□□□□ -1.52
SEMA3A-202ENST00000420047 SMARCC1Q92922 1105 aaPredicted RBP5.53□□□□□ -1.52
SEMA3A-202ENST00000420047 TSPAN17Q96FV3 270 aa5.53□□□□□ -1.52
SEMA3A-202ENST00000420047 TRAIPQ9BWF2 469 aa5.53□□□□□ -1.52
SEMA3A-202ENST00000420047 NTMQ9P121 344 aa5.53□□□□□ -1.52
SEMA3A-202ENST00000420047 SRRDQ9UH36 339 aa5.53□□□□□ -1.52
SEMA3A-202ENST00000420047 PLA2G2DQ9UNK4 145 aa5.53□□□□□ -1.52
SEMA3A-202ENST00000420047 ARHGEF12Q9NZN5 1544 aa5.53□□□□□ -1.52
SEMA3A-202ENST00000420047 HECW1Q76N89 1606 aa5.52□□□□□ -1.53
SEMA3A-202ENST00000420047 TRAPPC8Q9Y2L5 1435 aa5.52□□□□□ -1.53
SEMA3A-202ENST00000420047 GLI4P10075 376 aa5.52□□□□□ -1.53
SEMA3A-202ENST00000420047 L1CAMP32004 1257 aa5.52□□□□□ -1.53
SEMA3A-202ENST00000420047 MCM4P33991 863 aa5.52□□□□□ -1.53
SEMA3A-202ENST00000420047 APOBRQ0VD83 1088 aa5.52□□□□□ -1.53
SEMA3A-202ENST00000420047 DNAJC14Q6Y2X3 702 aaPredicted RBP5.52□□□□□ -1.53
SEMA3A-202ENST00000420047 USP48Q86UV5 1035 aa5.52□□□□□ -1.53
SEMA3A-202ENST00000420047 CPA5Q8WXQ8 436 aa5.52□□□□□ -1.53
SEMA3A-202ENST00000420047 ALG3Q92685 438 aa5.52□□□□□ -1.53
SEMA3A-202ENST00000420047 PTCHD1Q96NR3 888 aa5.52□□□□□ -1.53
SEMA3A-202ENST00000420047 CDK11AQ9UQ88 783 aaPredicted RBP5.52□□□□□ -1.53
SEMA3A-202ENST00000420047 ADAMTSL3P82987 1691 aa5.52□□□□□ -1.53
SEMA3A-202ENST00000420047 MADDQ8WXG6 1647 aa5.52□□□□□ -1.53
SEMA3A-202ENST00000420047 RICTORQ6R327 1708 aa5.51□□□□□ -1.53
SEMA3A-202ENST00000420047 TROQ12816 1431 aaPredicted RBP5.51□□□□□ -1.53
SEMA3A-202ENST00000420047 H0Y8X5 98 aa5.51□□□□□ -1.53
SEMA3A-202ENST00000420047 MC3RP41968 323 aa5.51□□□□□ -1.53
SEMA3A-202ENST00000420047 PMS1P54277 932 aaKnown RBP5.51□□□□□ -1.53
SEMA3A-202ENST00000420047 TRIM26Q12899 539 aaPredicted RBP5.51□□□□□ -1.53
SEMA3A-202ENST00000420047 SLC9A5Q14940 896 aa5.51□□□□□ -1.53
SEMA3A-202ENST00000420047 NOL9Q5SY16 702 aaKnown RBP5.51□□□□□ -1.53
SEMA3A-202ENST00000420047 TTLL7Q6ZT98 887 aa5.51□□□□□ -1.53
SEMA3A-202ENST00000420047 ZNF761Q86XN6 746 aaPredicted RBP5.51□□□□□ -1.53
SEMA3A-202ENST00000420047 SLITRK4Q8IW52 837 aa5.51□□□□□ -1.53
SEMA3A-202ENST00000420047 FCRL3Q96P31 734 aaPredicted RBP5.51□□□□□ -1.53
SEMA3A-202ENST00000420047 UBP1Q9NZI7 540 aa5.51□□□□□ -1.53
SEMA3A-202ENST00000420047 SF3B6Q9Y3B4 125 aaKnown RBP5.51□□□□□ -1.53
SEMA3A-202ENST00000420047 FHOD1Q9Y613 1164 aa5.51□□□□□ -1.53
SEMA3A-202ENST00000420047 EFCAB5A4FU69 1503 aa5.51□□□□□ -1.53
SEMA3A-202ENST00000420047 PHLDB1Q86UU1 1377 aa5.51□□□□□ -1.53
SEMA3A-202ENST00000420047 BCORL1Q5H9F3 1711 aa5.51□□□□□ -1.53
SEMA3A-202ENST00000420047 RIMS1Q86UR5 1692 aaKnown RBP5.5□□□□□ -1.53
SEMA3A-202ENST00000420047 CLIP1P30622 1438 aa5.5□□□□□ -1.53
SEMA3A-202ENST00000420047 FMN1Q68DA7 1419 aa5.5□□□□□ -1.53
SEMA3A-202ENST00000420047 C9IYK1 514 aa5.5□□□□□ -1.53
SEMA3A-202ENST00000420047 PLATP00750 562 aa5.5□□□□□ -1.53
SEMA3A-202ENST00000420047 ZNF445P59923 1031 aa5.5□□□□□ -1.53
SEMA3A-202ENST00000420047 RBM10P98175 930 aaKnown RBP5.5□□□□□ -1.53
SEMA3A-202ENST00000420047 CABP7Q86V35 215 aa5.5□□□□□ -1.53
SEMA3A-202ENST00000420047 TAB3Q8N5C8 712 aaPredicted RBP5.5□□□□□ -1.53
SEMA3A-202ENST00000420047 SLC16A11Q8NCK7 471 aa5.5□□□□□ -1.53
SEMA3A-202ENST00000420047 NT5C1AQ9BXI3 368 aa5.5□□□□□ -1.53
SEMA3A-202ENST00000420047 KRTAP3-1Q9BYR8 98 aa5.5□□□□□ -1.53
SEMA3A-202ENST00000420047 ADAMTS1Q9UHI8 967 aa5.5□□□□□ -1.53
SEMA3A-202ENST00000420047 NUDT5Q9UKK9 219 aa5.5□□□□□ -1.53
SEMA3A-202ENST00000420047 PCF11O94913 1555 aaKnown RBP5.5□□□□□ -1.53
SEMA3A-202ENST00000420047 ARHGAP5Q13017 1502 aa5.49□□□□□ -1.53
SEMA3A-202ENST00000420047 CDC42BPBQ9Y5S2 1711 aa5.49□□□□□ -1.53
SEMA3A-202ENST00000420047 ZBTB7AO95365 584 aa5.49□□□□□ -1.53
SEMA3A-202ENST00000420047 ZNF20P17024 532 aa5.49□□□□□ -1.53
SEMA3A-202ENST00000420047 TACR1P25103 407 aa5.49□□□□□ -1.53
SEMA3A-202ENST00000420047 PMLP29590 882 aa5.49□□□□□ -1.53
SEMA3A-202ENST00000420047 POU4F1Q01851 419 aa5.49□□□□□ -1.53
SEMA3A-202ENST00000420047 CACNB2Q08289 660 aaPredicted RBP5.49□□□□□ -1.53
SEMA3A-202ENST00000420047 NKD1Q969G9 470 aa5.49□□□□□ -1.53
SEMA3A-202ENST00000420047 PEX11GQ96HA9 241 aa5.49□□□□□ -1.53
SEMA3A-202ENST00000420047 SORCS2Q96PQ0 1159 aa5.49□□□□□ -1.53
SEMA3A-202ENST00000420047 KRTAP9-8Q9BYQ0 159 aa5.49□□□□□ -1.53
SEMA3A-202ENST00000420047 GP6Q9HCN6 339 aa5.49□□□□□ -1.53
SEMA3A-202ENST00000420047 SPATA6Q9NWH7 488 aaPredicted RBP5.49□□□□□ -1.53
SEMA3A-202ENST00000420047 POGZQ7Z3K3 1410 aa5.48□□□□□ -1.53
SEMA3A-202ENST00000420047 CASKIN1Q8WXD9 1431 aa5.48□□□□□ -1.53
SEMA3A-202ENST00000420047 ATP10AO60312 1499 aa5.48□□□□□ -1.53
SEMA3A-202ENST00000420047 A0A087WZG4 1122 aa5.48□□□□□ -1.53
SEMA3A-202ENST00000420047 FSHBP01225 129 aa5.48□□□□□ -1.53
SEMA3A-202ENST00000420047 ACRP10323 421 aa5.48□□□□□ -1.53
SEMA3A-202ENST00000420047 IMPDH2P12268 514 aa5.48□□□□□ -1.53
SEMA3A-202ENST00000420047 CD247P20963 164 aa5.48□□□□□ -1.53
SEMA3A-202ENST00000420047 KIAA2012Q0VF49 1180 aa5.48□□□□□ -1.53
SEMA3A-202ENST00000420047 GGT6Q6P531 493 aa5.48□□□□□ -1.53
SEMA3A-202ENST00000420047 HS2ST1Q7LGA3 356 aa5.48□□□□□ -1.53
SEMA3A-202ENST00000420047 FIBCD1Q8N539 461 aa5.48□□□□□ -1.53
SEMA3A-202ENST00000420047 LINC00482Q8N8I6 264 aa5.48□□□□□ -1.53
SEMA3A-202ENST00000420047 NETO2Q8NC67 525 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms