RNA–Protein interactions for RNA: ENST00000419629.1

SDCBPP3-201, Transcript of syndecan binding protein pseudogene 3, humanhuman

BASIC

Gene SDCBPP3, Length 891 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPP3-201ENST00000419629 DDX11Q96FC9 970 aa5.3□□□□□ -1.56
SDCBPP3-201ENST00000419629 SAMD11Q96NU1 681 aa5.3□□□□□ -1.56
SDCBPP3-201ENST00000419629 HAUS7Q99871 368 aa5.3□□□□□ -1.56
SDCBPP3-201ENST00000419629 WHRNQ9P202 907 aa5.3□□□□□ -1.56
SDCBPP3-201ENST00000419629 NUDT5Q9UKK9 219 aa5.3□□□□□ -1.56
SDCBPP3-201ENST00000419629 STXBP3O00186 592 aa5.29□□□□□ -1.56
SDCBPP3-201ENST00000419629 VAMP4O75379 141 aa5.29□□□□□ -1.56
SDCBPP3-201ENST00000419629 C8BP07358 591 aa5.29□□□□□ -1.56
SDCBPP3-201ENST00000419629 ZNF20P17024 532 aa5.29□□□□□ -1.56
SDCBPP3-201ENST00000419629 RACK1P63244 317 aaKnown RBP5.29□□□□□ -1.56
SDCBPP3-201ENST00000419629 PAK2Q13177 524 aa5.29□□□□□ -1.56
SDCBPP3-201ENST00000419629 SMAD4Q13485 552 aaKnown RBP5.29□□□□□ -1.56
SDCBPP3-201ENST00000419629 TBC1D10BQ4KMP7 808 aaPredicted RBP5.29□□□□□ -1.56
SDCBPP3-201ENST00000419629 TTC9BQ8N6N2 239 aa5.29□□□□□ -1.56
SDCBPP3-201ENST00000419629 ADCY4Q8NFM4 1077 aa5.29□□□□□ -1.56
SDCBPP3-201ENST00000419629 GPRASP2Q96D09 838 aa5.29□□□□□ -1.56
SDCBPP3-201ENST00000419629 GORASP1Q9BQQ3 440 aa5.29□□□□□ -1.56
SDCBPP3-201ENST00000419629 KLHL25Q9H0H3 589 aa5.29□□□□□ -1.56
SDCBPP3-201ENST00000419629 GULP1Q9UBP9 304 aa5.29□□□□□ -1.56
SDCBPP3-201ENST00000419629 INPP5FQ9Y2H2 1132 aa5.29□□□□□ -1.56
SDCBPP3-201ENST00000419629 C2orf71A6NGG8 1288 aa5.28□□□□□ -1.56
SDCBPP3-201ENST00000419629 PLATP00750 562 aa5.28□□□□□ -1.56
SDCBPP3-201ENST00000419629 WWC2Q6AWC2 1192 aa5.28□□□□□ -1.56
SDCBPP3-201ENST00000419629 VPS37DQ86XT2 251 aa5.28□□□□□ -1.56
SDCBPP3-201ENST00000419629 CPNE8Q86YQ8 564 aa5.28□□□□□ -1.56
SDCBPP3-201ENST00000419629 C8orf49Q96NF6 230 aa5.28□□□□□ -1.56
SDCBPP3-201ENST00000419629 SYT3Q9BQG1 590 aa5.28□□□□□ -1.56
SDCBPP3-201ENST00000419629 SIT1Q9Y3P8 196 aa5.28□□□□□ -1.56
SDCBPP3-201ENST00000419629 CYP2C8P10632 490 aa5.27□□□□□ -1.57
SDCBPP3-201ENST00000419629 RPL13P26373 211 aaKnown RBP5.27□□□□□ -1.57
SDCBPP3-201ENST00000419629 THBS2P35442 1172 aa5.27□□□□□ -1.57
SDCBPP3-201ENST00000419629 SEPHS1P49903 392 aa5.27□□□□□ -1.57
SDCBPP3-201ENST00000419629 DPY19L1Q2PZI1 675 aa5.27□□□□□ -1.57
SDCBPP3-201ENST00000419629 RGL3Q3MIN7 710 aa5.27□□□□□ -1.57
SDCBPP3-201ENST00000419629 GNPTABQ3T906 1256 aa5.27□□□□□ -1.57
SDCBPP3-201ENST00000419629 ARHGEF39Q8N4T4 335 aa5.27□□□□□ -1.57
SDCBPP3-201ENST00000419629 USP33Q8TEY7 942 aa5.27□□□□□ -1.57
SDCBPP3-201ENST00000419629 LOXL4Q96JB6 756 aa5.27□□□□□ -1.57
SDCBPP3-201ENST00000419629 CRBNQ96SW2 442 aa5.27□□□□□ -1.57
SDCBPP3-201ENST00000419629 C11orf84Q9BUA3 381 aaPredicted RBP5.27□□□□□ -1.57
SDCBPP3-201ENST00000419629 SSBP3Q9BWW4 388 aaPredicted RBP5.27□□□□□ -1.57
SDCBPP3-201ENST00000419629 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.27□□□□□ -1.57
SDCBPP3-201ENST00000419629 BACE2Q9Y5Z0 518 aa5.27□□□□□ -1.57
SDCBPP3-201ENST00000419629 NPHP3-ACAD11A0A0J9YXS1 232 aa5.26□□□□□ -1.57
SDCBPP3-201ENST00000419629 C7orf72A4D263 438 aa5.26□□□□□ -1.57
SDCBPP3-201ENST00000419629 SMARCA5O60264 1052 aaPredicted RBP5.26□□□□□ -1.57
SDCBPP3-201ENST00000419629 NTRK1P04629 796 aa5.26□□□□□ -1.57
SDCBPP3-201ENST00000419629 EPHX1P07099 455 aa5.26□□□□□ -1.57
SDCBPP3-201ENST00000419629 GJA8P48165 433 aa5.26□□□□□ -1.57
SDCBPP3-201ENST00000419629 RBM10P98175 930 aaKnown RBP5.26□□□□□ -1.57
SDCBPP3-201ENST00000419629 KIAA2012Q0VF49 1180 aa5.26□□□□□ -1.57
SDCBPP3-201ENST00000419629 HEATR6Q6AI08 1181 aaKnown RBP5.26□□□□□ -1.57
SDCBPP3-201ENST00000419629 SLC16A11Q8NCK7 471 aa5.26□□□□□ -1.57
SDCBPP3-201ENST00000419629 PLEKHO2Q8TD55 490 aa5.26□□□□□ -1.57
SDCBPP3-201ENST00000419629 RASGRP4Q8TDF6 673 aa5.26□□□□□ -1.57
SDCBPP3-201ENST00000419629 CAPN10Q9HC96 672 aa5.26□□□□□ -1.57
SDCBPP3-201ENST00000419629 CGGBP1Q9UFW8 167 aaPredicted RBP5.26□□□□□ -1.57
SDCBPP3-201ENST00000419629 INVSQ9Y283 1065 aa5.26□□□□□ -1.57
SDCBPP3-201ENST00000419629 EFR3BQ9Y2G0 817 aa5.26□□□□□ -1.57
SDCBPP3-201ENST00000419629 PPM1BO75688 479 aa5.25□□□□□ -1.57
SDCBPP3-201ENST00000419629 FSHBP01225 129 aa5.25□□□□□ -1.57
SDCBPP3-201ENST00000419629 FUCA1P04066 466 aa5.25□□□□□ -1.57
SDCBPP3-201ENST00000419629 PAMP19021 973 aa5.25□□□□□ -1.57
SDCBPP3-201ENST00000419629 AMPD2Q01433 879 aa5.25□□□□□ -1.57
SDCBPP3-201ENST00000419629 GRB10Q13322 594 aa5.25□□□□□ -1.57
SDCBPP3-201ENST00000419629 LGI4Q8N135 537 aa5.25□□□□□ -1.57
SDCBPP3-201ENST00000419629 FAM26EQ8N5C1 309 aa5.25□□□□□ -1.57
SDCBPP3-201ENST00000419629 KYQ8NBH2 561 aa5.25□□□□□ -1.57
SDCBPP3-201ENST00000419629 OR6P1Q8NGX9 317 aa5.25□□□□□ -1.57
SDCBPP3-201ENST00000419629 CPLX3Q8WVH0 158 aa5.25□□□□□ -1.57
SDCBPP3-201ENST00000419629 DPF3Q92784 378 aa5.25□□□□□ -1.57
SDCBPP3-201ENST00000419629 RCC1LQ96I51 464 aaKnown RBP5.25□□□□□ -1.57
SDCBPP3-201ENST00000419629 SEC16BQ96JE7 1060 aa5.25□□□□□ -1.57
SDCBPP3-201ENST00000419629 FGD4Q96M96 766 aa5.25□□□□□ -1.57
SDCBPP3-201ENST00000419629 GBP3Q9H0R5 595 aa5.25□□□□□ -1.57
SDCBPP3-201ENST00000419629 ACBD3Q9H3P7 528 aa5.25□□□□□ -1.57
SDCBPP3-201ENST00000419629 PHAXQ9H814 394 aaKnown RBP5.25□□□□□ -1.57
SDCBPP3-201ENST00000419629 PCDH18Q9HCL0 1135 aa5.25□□□□□ -1.57
SDCBPP3-201ENST00000419629 STRIP2Q9ULQ0 834 aa5.25□□□□□ -1.57
SDCBPP3-201ENST00000419629 PCDHB10Q9UN67 800 aa5.25□□□□□ -1.57
SDCBPP3-201ENST00000419629 TRBV23OR9-2A0A075B6M9 112 aa5.24□□□□□ -1.57
SDCBPP3-201ENST00000419629 MROH6A6NGR9 719 aa5.24□□□□□ -1.57
SDCBPP3-201ENST00000419629 SUV39H1O43463 412 aa5.24□□□□□ -1.57
SDCBPP3-201ENST00000419629 NPHS1O60500 1241 aa5.24□□□□□ -1.57
SDCBPP3-201ENST00000419629 SOX9P48436 509 aa5.24□□□□□ -1.57
SDCBPP3-201ENST00000419629 FAM26FQ5R3K3 315 aa5.24□□□□□ -1.57
SDCBPP3-201ENST00000419629 PRR31Q5SQ13 230 aa5.24□□□□□ -1.57
SDCBPP3-201ENST00000419629 CCDC81Q6ZN84 652 aa5.24□□□□□ -1.57
SDCBPP3-201ENST00000419629 ADAT2Q7Z6V5 191 aaKnown RBP5.24□□□□□ -1.57
SDCBPP3-201ENST00000419629 ZNF513Q8N8E2 541 aaPredicted RBP5.24□□□□□ -1.57
SDCBPP3-201ENST00000419629 GINM1Q9NU53 330 aa5.24□□□□□ -1.57
SDCBPP3-201ENST00000419629 A0A1W2PQH9 124 aa5.23□□□□□ -1.57
SDCBPP3-201ENST00000419629 EIF6P56537 245 aaKnown RBP5.23□□□□□ -1.57
SDCBPP3-201ENST00000419629 SLC7A5Q01650 507 aa5.23□□□□□ -1.57
SDCBPP3-201ENST00000419629 MBLAC2Q68D91 279 aa5.23□□□□□ -1.57
SDCBPP3-201ENST00000419629 MCTP2Q6DN12 878 aa5.23□□□□□ -1.57
SDCBPP3-201ENST00000419629 ETV3LQ6ZN32 361 aa5.23□□□□□ -1.57
SDCBPP3-201ENST00000419629 FAM124AQ86V42 546 aa5.23□□□□□ -1.57
SDCBPP3-201ENST00000419629 MIB1Q86YT6 1006 aa5.23□□□□□ -1.57
SDCBPP3-201ENST00000419629 TXNDC5Q8NBS9 432 aaKnown RBP5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 108.1 ms