RNA–Protein interactions for RNA: ENST00000418800.6

DDR1-232, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene DDR1, Length 3,588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-232ENST00000418800 CCDC63Q8NA47 563 aa12.9□□□□□ -0.34
DDR1-232ENST00000418800 CYFIP2Q96F07 1278 aa12.9□□□□□ -0.34
DDR1-232ENST00000418800 STAMBPL1Q96FJ0 436 aa12.9□□□□□ -0.34
DDR1-232ENST00000418800 NLRP3Q96P20 1036 aa12.9□□□□□ -0.34
DDR1-232ENST00000418800 CCNHP51946 323 aaPredicted RBP12.9□□□□□ -0.34
DDR1-232ENST00000418800 PUM3Q15397 648 aaKnown RBP12.9□□□□□ -0.34
DDR1-232ENST00000418800 PTGISQ16647 500 aa12.9□□□□□ -0.34
DDR1-232ENST00000418800 ACCSLQ4AC99 568 aa12.9□□□□□ -0.34
DDR1-232ENST00000418800 SOGA3Q5TF21 947 aa12.9□□□□□ -0.34
DDR1-232ENST00000418800 ENAHQ8N8S7 591 aaPredicted RBP12.9□□□□□ -0.34
DDR1-232ENST00000418800 SPAG5Q96R06 1193 aa12.9□□□□□ -0.34
DDR1-232ENST00000418800 MCM9Q9NXL9 1143 aa12.9□□□□□ -0.34
DDR1-232ENST00000418800 AP1G2O75843 785 aa12.89□□□□□ -0.35
DDR1-232ENST00000418800 MDH1P40925 334 aaKnown RBP12.89□□□□□ -0.35
DDR1-232ENST00000418800 KIAA0753Q2KHM9 967 aa12.89□□□□□ -0.35
DDR1-232ENST00000418800 BRINP3Q76B58 766 aa12.89□□□□□ -0.35
DDR1-232ENST00000418800 ZNF579Q8NAF0 562 aaKnown RBP12.89□□□□□ -0.35
DDR1-232ENST00000418800 MDM1Q8TC05 714 aa12.89□□□□□ -0.35
DDR1-232ENST00000418800 HVCN1Q96D96 273 aa12.89□□□□□ -0.35
DDR1-232ENST00000418800 LIMA1Q9UHB6 759 aaKnown RBP12.89□□□□□ -0.35
DDR1-232ENST00000418800 CTNND1O60716 968 aaKnown RBP12.89□□□□□ -0.35
DDR1-232ENST00000418800 ARMC2Q8NEN0 867 aa12.89□□□□□ -0.35
DDR1-232ENST00000418800 LPIN2Q92539 896 aa12.89□□□□□ -0.35
DDR1-232ENST00000418800 ADAMTS1Q9UHI8 967 aa12.89□□□□□ -0.35
DDR1-232ENST00000418800 GRIN2DO15399 1336 aa12.89□□□□□ -0.35
DDR1-232ENST00000418800 PSMD14O00487 310 aa12.89□□□□□ -0.35
DDR1-232ENST00000418800 SLC8A1P32418 973 aa12.89□□□□□ -0.35
DDR1-232ENST00000418800 NAPAP54920 295 aa12.89□□□□□ -0.35
DDR1-232ENST00000418800 POLR2FP61218 127 aaKnown RBP12.89□□□□□ -0.35
DDR1-232ENST00000418800 ANKRD40Q6AI12 368 aa12.89□□□□□ -0.35
DDR1-232ENST00000418800 EMBQ6PCB8 327 aa12.89□□□□□ -0.35
DDR1-232ENST00000418800 CABP7Q86V35 215 aa12.89□□□□□ -0.35
DDR1-232ENST00000418800 CCDC25Q86WR0 208 aa12.89□□□□□ -0.35
DDR1-232ENST00000418800 FAM114A1Q8IWE2 563 aa12.89□□□□□ -0.35
DDR1-232ENST00000418800 PPP1R12CQ9BZL4 782 aa12.89□□□□□ -0.35
DDR1-232ENST00000418800 VCPKMTQ9H867 229 aa12.89□□□□□ -0.35
DDR1-232ENST00000418800 SNX12Q9UMY4 172 aa12.89□□□□□ -0.35
DDR1-232ENST00000418800 MYH10P35580 1976 aa12.88□□□□□ -0.35
DDR1-232ENST00000418800 GOLGA6L10A0A0M3HER8 536 aa12.88□□□□□ -0.35
DDR1-232ENST00000418800 TARSL2A2RTX5 802 aaKnown RBP12.88□□□□□ -0.35
DDR1-232ENST00000418800 DIAPH2O60879 1101 aa12.88□□□□□ -0.35
DDR1-232ENST00000418800 SMTNP53814 917 aa12.88□□□□□ -0.35
DDR1-232ENST00000418800 CTSWP56202 376 aa12.88□□□□□ -0.35
DDR1-232ENST00000418800 ZBED6P86452 979 aa12.88□□□□□ -0.35
DDR1-232ENST00000418800 STK4Q13043 487 aa12.88□□□□□ -0.35
DDR1-232ENST00000418800 ALS2CLQ60I27 953 aa12.88□□□□□ -0.35
DDR1-232ENST00000418800 ANKS4BQ8N8V4 417 aa12.88□□□□□ -0.35
DDR1-232ENST00000418800 CALML4Q96GE6 196 aa12.88□□□□□ -0.35
DDR1-232ENST00000418800 SGSM3Q96HU1 749 aa12.88□□□□□ -0.35
DDR1-232ENST00000418800 RNF26Q9BY78 433 aaPredicted RBP12.88□□□□□ -0.35
DDR1-232ENST00000418800 LUC7LQ9NQ29 371 aaKnown RBP12.88□□□□□ -0.35
DDR1-232ENST00000418800 GMNCA6NCL1 334 aa12.88□□□□□ -0.35
DDR1-232ENST00000418800 LRRC53A6NM62 1247 aa12.88□□□□□ -0.35
DDR1-232ENST00000418800 GLI1P08151 1106 aa12.88□□□□□ -0.35
DDR1-232ENST00000418800 SCG2P13521 617 aa12.88□□□□□ -0.35
DDR1-232ENST00000418800 MKRN4PQ13434 485 aaPredicted RBP12.88□□□□□ -0.35
DDR1-232ENST00000418800 APTXQ7Z2E3 356 aaKnown RBP12.88□□□□□ -0.35
DDR1-232ENST00000418800 CADPS2Q86UW7 1296 aa12.88□□□□□ -0.35
DDR1-232ENST00000418800 ZBTB38Q8NAP3 1195 aaPredicted RBP12.88□□□□□ -0.35
DDR1-232ENST00000418800 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.88□□□□□ -0.358e-8■■■■□ 25.6
DDR1-232ENST00000418800 JCADQ9P266 1359 aa12.88□□□□□ -0.35
DDR1-232ENST00000418800 CYP2D6P10635 497 aa12.87□□□□□ -0.35
DDR1-232ENST00000418800 TCP1P17987 556 aaKnown RBP12.87□□□□□ -0.35
DDR1-232ENST00000418800 PLCG1P19174 1290 aa12.87□□□□□ -0.35
DDR1-232ENST00000418800 SLC1A4P43007 532 aa12.87□□□□□ -0.35
DDR1-232ENST00000418800 EVX2Q03828 476 aa12.87□□□□□ -0.35
DDR1-232ENST00000418800 ADCY1Q08828 1119 aa12.87□□□□□ -0.35
DDR1-232ENST00000418800 WDR59Q6PJI9 974 aa12.87□□□□□ -0.35
DDR1-232ENST00000418800 TBC1D5Q92609 795 aa12.87□□□□□ -0.35
DDR1-232ENST00000418800 TFCP2L1Q9NZI6 479 aa12.87□□□□□ -0.35
DDR1-232ENST00000418800 PALMO75781 387 aa12.87□□□□□ -0.35
DDR1-232ENST00000418800 PCK1P35558 622 aa12.87□□□□□ -0.35
DDR1-232ENST00000418800 MAGOHP61326 146 aaKnown RBP12.87□□□□□ -0.35
DDR1-232ENST00000418800 KCNB1Q14721 858 aa12.87□□□□□ -0.35
DDR1-232ENST00000418800 PREPLQ4J6C6 727 aaPredicted RBP12.87□□□□□ -0.35
DDR1-232ENST00000418800 SPATS2Q86XZ4 545 aaKnown RBP12.87□□□□□ -0.35
DDR1-232ENST00000418800 BLIDQ8IZY5 108 aa12.87□□□□□ -0.35
DDR1-232ENST00000418800 FUKQ8N0W3 1084 aa12.87□□□□□ -0.35
DDR1-232ENST00000418800 MAGOHBQ96A72 148 aaKnown RBP12.87□□□□□ -0.35
DDR1-232ENST00000418800 SAAL1Q96ER3 474 aa12.87□□□□□ -0.35
DDR1-232ENST00000418800 MCM8Q9UJA3 840 aa12.87□□□□□ -0.35
DDR1-232ENST00000418800 CAPN11Q9UMQ6 739 aa12.87□□□□□ -0.35
DDR1-232ENST00000418800 RFX7Q2KHR2 1363 aa12.87□□□□□ -0.35
DDR1-232ENST00000418800 RTL9Q8NET4 1388 aa12.87□□□□□ -0.35
DDR1-232ENST00000418800 WTIPA6NIX2 430 aaPredicted RBP12.87□□□□□ -0.35
DDR1-232ENST00000418800 SLCO1A2P46721 670 aa12.87□□□□□ -0.35
DDR1-232ENST00000418800 CAPRIN2Q6IMN6 1127 aaKnown RBP12.87□□□□□ -0.35
DDR1-232ENST00000418800 P2RX5Q93086 422 aa12.87□□□□□ -0.35
DDR1-232ENST00000418800 ATP6V1G3Q96LB4 118 aa12.87□□□□□ -0.35
DDR1-232ENST00000418800 TSGA10Q9BZW7 698 aa12.87□□□□□ -0.35
DDR1-232ENST00000418800 MLXIPLQ9NP71 852 aa12.87□□□□□ -0.35
DDR1-232ENST00000418800 TACC3Q9Y6A5 838 aa12.87□□□□□ -0.35
DDR1-232ENST00000418800 CHD2O14647 1828 aaKnown RBP12.86□□□□□ -0.35
DDR1-232ENST00000418800 BICDL2A1A5D9 508 aa12.86□□□□□ -0.35
DDR1-232ENST00000418800 CCDC50Q8IVM0 306 aa12.86□□□□□ -0.35
DDR1-232ENST00000418800 KIF2BQ8N4N8 673 aa12.86□□□□□ -0.35
DDR1-232ENST00000418800 SRBD1Q8N5C6 995 aaKnown RBP12.86□□□□□ -0.35
DDR1-232ENST00000418800 ELAC2Q9BQ52 826 aaKnown RBP12.86□□□□□ -0.35
DDR1-232ENST00000418800 SAMD15Q9P1V8 674 aa12.86□□□□□ -0.35
DDR1-232ENST00000418800 G3BP2Q9UN86 482 aaKnown RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms