RNA–Protein interactions for RNA: ENST00000418378.5

SPARCL1-202, Transcript of SPARC like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SPARCL1, Length 2,994 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCL1-202ENST00000418378 SSBP05455 408 aaKnown RBP eCLIP6.43□□□□□ -1.38
SPARCL1-202ENST00000418378 VDRP11473 427 aa6.43□□□□□ -1.38
SPARCL1-202ENST00000418378 SP4Q02446 784 aa6.43□□□□□ -1.38
SPARCL1-202ENST00000418378 KLRC3Q07444 240 aa6.43□□□□□ -1.38
SPARCL1-202ENST00000418378 PTGDRQ13258 359 aa6.43□□□□□ -1.38
SPARCL1-202ENST00000418378 PLS1Q14651 629 aa6.43□□□□□ -1.38
SPARCL1-202ENST00000418378 SBK1Q52WX2 424 aa6.43□□□□□ -1.38
SPARCL1-202ENST00000418378 JAZF1Q86VZ6 243 aa6.43□□□□□ -1.38
SPARCL1-202ENST00000418378 C17orf53Q8N3J3 647 aaPredicted RBP6.43□□□□□ -1.38
SPARCL1-202ENST00000418378 CHCHD4Q8N4Q1 142 aa6.43□□□□□ -1.38
SPARCL1-202ENST00000418378 TBC1D5Q92609 795 aa6.43□□□□□ -1.38
SPARCL1-202ENST00000418378 TANGO6Q9C0B7 1094 aa6.43□□□□□ -1.38
SPARCL1-202ENST00000418378 BMP2KQ9NSY1 1161 aaPredicted RBP6.43□□□□□ -1.38
SPARCL1-202ENST00000418378 DOCK2Q92608 1830 aa6.43□□□□□ -1.38
SPARCL1-202ENST00000418378 POM121CA8CG34 1229 aa6.42□□□□□ -1.38
SPARCL1-202ENST00000418378 YBX3P16989 372 aaKnown RBP eCLIP6.42□□□□□ -1.38
SPARCL1-202ENST00000418378 TXKP42681 527 aa6.42□□□□□ -1.38
SPARCL1-202ENST00000418378 STX17P56962 302 aa6.42□□□□□ -1.38
SPARCL1-202ENST00000418378 TSNAXIP1Q2TAA8 658 aa6.42□□□□□ -1.38
SPARCL1-202ENST00000418378 KIAA1755Q5JYT7 1200 aa6.42□□□□□ -1.38
SPARCL1-202ENST00000418378 LRSAM1Q6UWE0 723 aa6.42□□□□□ -1.38
SPARCL1-202ENST00000418378 HHIPL2Q6UWX4 724 aa6.42□□□□□ -1.38
SPARCL1-202ENST00000418378 ADGRF4Q8IZF3 695 aa6.42□□□□□ -1.38
SPARCL1-202ENST00000418378 SUPT20HQ8NEM7 779 aa6.42□□□□□ -1.38
SPARCL1-202ENST00000418378 NEDD1Q8NHV4 660 aa6.42□□□□□ -1.38
SPARCL1-202ENST00000418378 MRPS27Q92552 414 aaKnown RBP6.42□□□□□ -1.38
SPARCL1-202ENST00000418378 RRP36Q96EU6 259 aaKnown RBP6.42□□□□□ -1.38
SPARCL1-202ENST00000418378 SH2D3AQ9BRG2 576 aa6.42□□□□□ -1.38
SPARCL1-202ENST00000418378 ZNF341Q9BYN7 854 aa6.42□□□□□ -1.38
SPARCL1-202ENST00000418378 CSRNP2Q9H175 543 aa6.42□□□□□ -1.38
SPARCL1-202ENST00000418378 DEFB129Q9H1M3 183 aa6.42□□□□□ -1.38
SPARCL1-202ENST00000418378 TSPYL2Q9H2G4 693 aaPredicted RBP6.42□□□□□ -1.38
SPARCL1-202ENST00000418378 MRPL42Q9Y6G3 142 aaKnown RBP6.42□□□□□ -1.38
SPARCL1-202ENST00000418378 HTTP42858 3142 aa6.42□□□□□ -1.38
SPARCL1-202ENST00000418378 ZNF202O95125 648 aa6.42□□□□□ -1.38
SPARCL1-202ENST00000418378 TOP1P11387 765 aaKnown RBP6.42□□□□□ -1.38
SPARCL1-202ENST00000418378 SYKP43405 635 aa6.42□□□□□ -1.38
SPARCL1-202ENST00000418378 SIM2Q14190 667 aaPredicted RBP6.42□□□□□ -1.38
SPARCL1-202ENST00000418378 TRMT44Q8IYL2 757 aaKnown RBP6.42□□□□□ -1.38
SPARCL1-202ENST00000418378 SLC16A10Q8TF71 515 aa6.42□□□□□ -1.38
SPARCL1-202ENST00000418378 PURBQ96QR8 312 aaKnown RBP6.42□□□□□ -1.38
SPARCL1-202ENST00000418378 ZHX3Q9H4I2 956 aa6.42□□□□□ -1.38
SPARCL1-202ENST00000418378 BRMS1Q9HCU9 246 aa6.42□□□□□ -1.38
SPARCL1-202ENST00000418378 COL4A3BPQ9Y5P4 624 aa6.42□□□□□ -1.38
SPARCL1-202ENST00000418378 CDK5RAP2Q96SN8 1893 aa6.42□□□□□ -1.38
SPARCL1-202ENST00000418378 ADM5C9JUS6 153 aa6.42□□□□□ -1.38
SPARCL1-202ENST00000418378 DDX39AO00148 427 aaKnown RBP6.42□□□□□ -1.38
SPARCL1-202ENST00000418378 CHMP2AO43633 222 aa6.42□□□□□ -1.38
SPARCL1-202ENST00000418378 NDUFB10O96000 172 aa6.42□□□□□ -1.38
SPARCL1-202ENST00000418378 OATP04181 439 aa6.42□□□□□ -1.38
SPARCL1-202ENST00000418378 POTEIP0CG38 1075 aa6.42□□□□□ -1.38
SPARCL1-202ENST00000418378 POTEJP0CG39 1038 aa6.42□□□□□ -1.38
SPARCL1-202ENST00000418378 GTF2F1P35269 517 aaKnown RBP eCLIP6.42□□□□□ -1.38
SPARCL1-202ENST00000418378 TECP42680 631 aa6.42□□□□□ -1.38
SPARCL1-202ENST00000418378 EVCP57679 992 aa6.42□□□□□ -1.38
SPARCL1-202ENST00000418378 PSMC1P62191 440 aaKnown RBP6.42□□□□□ -1.38
SPARCL1-202ENST00000418378 TYRO3Q06418 890 aa6.42□□□□□ -1.38
SPARCL1-202ENST00000418378 SPP2Q13103 211 aa6.42□□□□□ -1.38
SPARCL1-202ENST00000418378 KARSQ15046 597 aaKnown RBP6.42□□□□□ -1.38
SPARCL1-202ENST00000418378 KIF4BQ2VIQ3 1234 aa6.42□□□□□ -1.38
SPARCL1-202ENST00000418378 ZNF394Q53GI3 561 aa6.42□□□□□ -1.38
SPARCL1-202ENST00000418378 SHC4Q6S5L8 630 aa6.42□□□□□ -1.38
SPARCL1-202ENST00000418378 C11orf57Q6ZUT1 292 aaPredicted RBP6.42□□□□□ -1.38
SPARCL1-202ENST00000418378 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.42□□□□□ -1.38
SPARCL1-202ENST00000418378 CNNM3Q8NE01 707 aa6.42□□□□□ -1.38
SPARCL1-202ENST00000418378 CEP63Q96MT8 703 aa6.42□□□□□ -1.38
SPARCL1-202ENST00000418378 WRNIP1Q96S55 665 aa6.42□□□□□ -1.38
SPARCL1-202ENST00000418378 GOPCQ9HD26 462 aa6.42□□□□□ -1.38
SPARCL1-202ENST00000418378 SUN2Q9UH99 717 aa6.42□□□□□ -1.38
SPARCL1-202ENST00000418378 PCDHA1Q9Y5I3 950 aa6.42□□□□□ -1.38
SPARCL1-202ENST00000418378 SNED1Q8TER0 1413 aa6.42□□□□□ -1.38
SPARCL1-202ENST00000418378 ARAP2Q8WZ64 1704 aa6.41□□□□□ -1.38
SPARCL1-202ENST00000418378 BECN2A8MW95 431 aa6.41□□□□□ -1.38
SPARCL1-202ENST00000418378 H7C1D1 291 aa6.41□□□□□ -1.38
SPARCL1-202ENST00000418378 CTAGE5O15320 804 aa6.41□□□□□ -1.38
SPARCL1-202ENST00000418378 TDP2O95551 362 aa6.41□□□□□ -1.38
SPARCL1-202ENST00000418378 MRE11P49959 708 aa6.41□□□□□ -1.38
SPARCL1-202ENST00000418378 CACNB1Q02641 598 aaPredicted RBP6.41□□□□□ -1.38
SPARCL1-202ENST00000418378 FUT2Q10981 343 aa6.41□□□□□ -1.38
SPARCL1-202ENST00000418378 TTC38Q5R3I4 469 aa6.41□□□□□ -1.38
SPARCL1-202ENST00000418378 C15orf52Q6ZUT6 534 aaKnown RBP6.41□□□□□ -1.38
SPARCL1-202ENST00000418378 DGKHQ86XP1 1220 aa6.41□□□□□ -1.38
SPARCL1-202ENST00000418378 WDR75Q8IWA0 830 aaKnown RBP6.41□□□□□ -1.38
SPARCL1-202ENST00000418378 TBCKQ8TEA7 893 aa6.41□□□□□ -1.38
SPARCL1-202ENST00000418378 WASF1Q92558 559 aa6.41□□□□□ -1.38
SPARCL1-202ENST00000418378 RNF26Q9BY78 433 aaPredicted RBP6.41□□□□□ -1.38
SPARCL1-202ENST00000418378 TMEM60Q9H2L4 133 aa6.41□□□□□ -1.38
SPARCL1-202ENST00000418378 SERTAD1Q9UHV2 236 aa6.41□□□□□ -1.38
SPARCL1-202ENST00000418378 ZBTB21Q9ULJ3 1066 aa6.41□□□□□ -1.38
SPARCL1-202ENST00000418378 ITM2BQ9Y287 266 aa6.41□□□□□ -1.38
SPARCL1-202ENST00000418378 SCINQ9Y6U3 715 aa6.41□□□□□ -1.38
SPARCL1-202ENST00000418378 VIL1P09327 827 aaKnown RBP6.41□□□□□ -1.38
SPARCL1-202ENST00000418378 IL4RP24394 825 aa6.41□□□□□ -1.38
SPARCL1-202ENST00000418378 ZNF165P49910 485 aa6.41□□□□□ -1.38
SPARCL1-202ENST00000418378 DPCR1Q3MIW9 517 aa6.41□□□□□ -1.38
SPARCL1-202ENST00000418378 LRCH2Q5VUJ6 765 aa6.41□□□□□ -1.38
SPARCL1-202ENST00000418378 BLIDQ8IZY5 108 aa6.41□□□□□ -1.38
SPARCL1-202ENST00000418378 TRIML1Q8N9V2 468 aa6.41□□□□□ -1.38
SPARCL1-202ENST00000418378 RTEL1Q9NZ71 1219 aa6.41□□□□□ -1.38
SPARCL1-202ENST00000418378 KLHL33A6NCF5 533 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms