RNA–Protein interactions for RNA: ENST00000417352.5

COPS3-202, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 1,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-202ENST00000417352 ITGA7Q13683 1181 aa8.2□□□□□ -1.1
COPS3-202ENST00000417352 BAATQ14032 418 aaPredicted RBP8.2□□□□□ -1.1
COPS3-202ENST00000417352 USH1GQ495M9 461 aa8.2□□□□□ -1.1
COPS3-202ENST00000417352 FAM47CQ5HY64 1035 aa8.2□□□□□ -1.1
COPS3-202ENST00000417352 SYDE2Q5VT97 1194 aa8.2□□□□□ -1.1
COPS3-202ENST00000417352 MFSD5Q6N075 450 aa8.2□□□□□ -1.1
COPS3-202ENST00000417352 CWC27Q6UX04 472 aaKnown RBP8.2□□□□□ -1.1
COPS3-202ENST00000417352 DCAF4Q8WV16 495 aa8.2□□□□□ -1.1
COPS3-202ENST00000417352 DDX12PQ92771 950 aa8.2□□□□□ -1.1
COPS3-202ENST00000417352 TOX2Q96NM4 488 aa8.2□□□□□ -1.1
COPS3-202ENST00000417352 MPHOSPH6Q99547 160 aaKnown RBP8.2□□□□□ -1.1
COPS3-202ENST00000417352 TMEM47Q9BQJ4 181 aa8.2□□□□□ -1.1
COPS3-202ENST00000417352 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.2□□□□□ -1.14e-6■□□□□ 10.2
COPS3-202ENST00000417352 CYP39A1Q9NYL5 469 aa8.2□□□□□ -1.1
COPS3-202ENST00000417352 ADD3Q9UEY8 706 aaKnown RBP8.2□□□□□ -1.1
COPS3-202ENST00000417352 ZNF536O15090 1300 aa8.2□□□□□ -1.1
COPS3-202ENST00000417352 ZBBXA8MT70 800 aa8.19□□□□□ -1.1
COPS3-202ENST00000417352 ZNF213O14771 459 aa8.19□□□□□ -1.1
COPS3-202ENST00000417352 FGBP02675 491 aa8.19□□□□□ -1.1
COPS3-202ENST00000417352 ICAM1P05362 532 aa8.19□□□□□ -1.1
COPS3-202ENST00000417352 GOLGA8HP0CJ92 632 aa8.19□□□□□ -1.1
COPS3-202ENST00000417352 HSPD1P10809 573 aaKnown RBP8.19□□□□□ -1.1
COPS3-202ENST00000417352 IGFBP4P22692 258 aa8.19□□□□□ -1.1
COPS3-202ENST00000417352 DNAJB2P25686 324 aa8.19□□□□□ -1.1
COPS3-202ENST00000417352 CCDC85BQ15834 202 aaPredicted RBP8.19□□□□□ -1.1
COPS3-202ENST00000417352 BRDTQ58F21 947 aaPredicted RBP8.19□□□□□ -1.1
COPS3-202ENST00000417352 IQSEC1Q6DN90 963 aa8.19□□□□□ -1.1
COPS3-202ENST00000417352 RNF207Q6ZRF8 634 aa8.19□□□□□ -1.1
COPS3-202ENST00000417352 ZNF365Q70YC5 407 aa8.19□□□□□ -1.1
COPS3-202ENST00000417352 OTOP2Q7RTS6 562 aa8.19□□□□□ -1.1
COPS3-202ENST00000417352 FAM133AQ8N9E0 248 aa8.19□□□□□ -1.1
COPS3-202ENST00000417352 TIFAQ96CG3 184 aa8.19□□□□□ -1.1
COPS3-202ENST00000417352 FGD4Q96M96 766 aa8.19□□□□□ -1.1
COPS3-202ENST00000417352 WDR11Q9BZH6 1224 aa8.19□□□□□ -1.1
COPS3-202ENST00000417352 TRPV6Q9H1D0 765 aa8.19□□□□□ -1.1
COPS3-202ENST00000417352 TTYH1Q9H313 450 aaPredicted RBP8.19□□□□□ -1.1
COPS3-202ENST00000417352 HIPK3Q9H422 1215 aa8.19□□□□□ -1.1
COPS3-202ENST00000417352 ZNF576Q9H609 170 aa8.19□□□□□ -1.1
COPS3-202ENST00000417352 VAT1LQ9HCJ6 419 aa8.19□□□□□ -1.1
COPS3-202ENST00000417352 DIAPH3Q9NSV4 1193 aa8.19□□□□□ -1.1
COPS3-202ENST00000417352 MSRAQ9UJ68 235 aa8.19□□□□□ -1.1
COPS3-202ENST00000417352 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.19□□□□□ -1.1
COPS3-202ENST00000417352 LAMA2P24043 3122 aaKnown RBP8.19□□□□□ -1.1
COPS3-202ENST00000417352 B4DLN1 442 aa8.18□□□□□ -1.1
COPS3-202ENST00000417352 NFIBO00712 420 aa8.18□□□□□ -1.1
COPS3-202ENST00000417352 ORC4O43929 436 aa8.18□□□□□ -1.1
COPS3-202ENST00000417352 CABYRO75952 493 aa8.18□□□□□ -1.1
COPS3-202ENST00000417352 CST5P28325 142 aaPredicted RBP8.18□□□□□ -1.1
COPS3-202ENST00000417352 MRPL12P52815 198 aaKnown RBP8.18□□□□□ -1.1
COPS3-202ENST00000417352 GRIN2CQ14957 1233 aa8.18□□□□□ -1.1
COPS3-202ENST00000417352 AKNAD1Q5T1N1 836 aa8.18□□□□□ -1.1
COPS3-202ENST00000417352 TMEM63BQ5T3F8 832 aa8.18□□□□□ -1.1
COPS3-202ENST00000417352 CCSAPQ6IQ19 270 aaPredicted RBP8.18□□□□□ -1.1
COPS3-202ENST00000417352 CHST3Q7LGC8 479 aa8.18□□□□□ -1.1
COPS3-202ENST00000417352 DEFB128Q7Z7B8 93 aa8.18□□□□□ -1.1
COPS3-202ENST00000417352 ZNF589Q86UQ0 364 aaPredicted RBP8.18□□□□□ -1.1
COPS3-202ENST00000417352 MICALL1Q8N3F8 863 aa8.18□□□□□ -1.1
COPS3-202ENST00000417352 OR6J1Q8NGC5 347 aa8.18□□□□□ -1.1
COPS3-202ENST00000417352 PPP1R13LQ8WUF5 828 aa8.18□□□□□ -1.1
COPS3-202ENST00000417352 ESR2Q92731 530 aa8.18□□□□□ -1.1
COPS3-202ENST00000417352 GAS2L1Q99501 681 aaPredicted RBP8.18□□□□□ -1.1
COPS3-202ENST00000417352 COL25A1Q9BXS0 654 aaPredicted RBP8.18□□□□□ -1.1
COPS3-202ENST00000417352 UBA5Q9GZZ9 404 aa8.18□□□□□ -1.1
COPS3-202ENST00000417352 UPF3AQ9H1J1 476 aaKnown RBP8.18□□□□□ -1.1
COPS3-202ENST00000417352 MTIF3Q9H2K0 278 aaKnown RBP8.18□□□□□ -1.1
COPS3-202ENST00000417352 RNF41Q9H4P4 317 aaPredicted RBP8.18□□□□□ -1.1
COPS3-202ENST00000417352 KAT14Q9H8E8 782 aa8.18□□□□□ -1.1
COPS3-202ENST00000417352 ANAPC4Q9UJX5 808 aa8.18□□□□□ -1.1
COPS3-202ENST00000417352 NOD1Q9Y239 953 aa8.18□□□□□ -1.1
COPS3-202ENST00000417352 CCDC171Q6TFL3 1326 aa8.18□□□□□ -1.1
COPS3-202ENST00000417352 PLIN4Q96Q06 1357 aa8.18□□□□□ -1.1
COPS3-202ENST00000417352 A0A0C4DFX4 3053 aa8.17□□□□□ -1.1
COPS3-202ENST00000417352 FOXP2O15409 715 aa8.17□□□□□ -1.1
COPS3-202ENST00000417352 PLA2G6O60733 806 aa8.17□□□□□ -1.1
COPS3-202ENST00000417352 KDM4AO75164 1064 aa8.17□□□□□ -1.1
COPS3-202ENST00000417352 SDSP20132 328 aa8.17□□□□□ -1.1
COPS3-202ENST00000417352 CPT1AP50416 773 aa8.17□□□□□ -1.1
COPS3-202ENST00000417352 CDK7P50613 346 aa8.17□□□□□ -1.1
COPS3-202ENST00000417352 ALDH5A1P51649 535 aaPredicted RBP8.17□□□□□ -1.1
COPS3-202ENST00000417352 KCNC4Q03721 635 aa8.17□□□□□ -1.1
COPS3-202ENST00000417352 HDAC1Q13547 482 aaPredicted RBP8.17□□□□□ -1.1
COPS3-202ENST00000417352 ALX1Q15699 326 aa8.17□□□□□ -1.1
COPS3-202ENST00000417352 TMEM240Q5SV17 173 aa8.17□□□□□ -1.1
COPS3-202ENST00000417352 TAPT1Q6NXT6 567 aa8.17□□□□□ -1.1
COPS3-202ENST00000417352 PSRC1Q6PGN9 363 aaPredicted RBP8.17□□□□□ -1.1
COPS3-202ENST00000417352 SLC30A10Q6XR72 485 aa8.17□□□□□ -1.1
COPS3-202ENST00000417352 SEPT14Q6ZU15 432 aa8.17□□□□□ -1.1
COPS3-202ENST00000417352 C16orf59Q7L2K0 433 aa8.17□□□□□ -1.1
COPS3-202ENST00000417352 IQCA1Q86XH1 822 aa8.17□□□□□ -1.1
COPS3-202ENST00000417352 FAM126BQ8IXS8 530 aa8.17□□□□□ -1.1
COPS3-202ENST00000417352 FTOQ9C0B1 505 aaKnown RBP eCLIP8.17□□□□□ -1.1
COPS3-202ENST00000417352 RANBP17Q9H2T7 1088 aaKnown RBP8.17□□□□□ -1.1
COPS3-202ENST00000417352 CPVLQ9H3G5 476 aa8.17□□□□□ -1.1
COPS3-202ENST00000417352 PRDM12Q9H4Q4 367 aa8.17□□□□□ -1.1
COPS3-202ENST00000417352 SLC28A3Q9HAS3 691 aa8.17□□□□□ -1.1
COPS3-202ENST00000417352 VTA1Q9NP79 307 aa8.17□□□□□ -1.1
COPS3-202ENST00000417352 IL23AQ9NPF7 189 aa8.17□□□□□ -1.1
COPS3-202ENST00000417352 TBX21Q9UL17 535 aa8.17□□□□□ -1.1
COPS3-202ENST00000417352 GNEQ9Y223 722 aaKnown RBP8.17□□□□□ -1.1
COPS3-202ENST00000417352 ASTN1O14525 1302 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms