RNA–Protein interactions for RNA: ENST00000417300.1

GABRE-202, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 2

Gene GABRE, Length 619 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-202ENST00000417300 HCN4Q9Y3Q4 1203 aa13.54□□□□□ -0.24
GABRE-202ENST00000417300 PCDHB6Q9Y5E3 794 aa13.54□□□□□ -0.24
GABRE-202ENST00000417300 PCDHA1Q9Y5I3 950 aa13.54□□□□□ -0.24
GABRE-202ENST00000417300 CCL15-CCL14A0A0B4J2E2 113 aa13.53□□□□□ -0.24
GABRE-202ENST00000417300 A0A1W2PQ27 194 aa13.53□□□□□ -0.24
GABRE-202ENST00000417300 A0A1W2PQ64 194 aa13.53□□□□□ -0.24
GABRE-202ENST00000417300 A0A1W2PQD8 194 aa13.53□□□□□ -0.24
GABRE-202ENST00000417300 SPDYE5A6NIY4 337 aa13.53□□□□□ -0.24
GABRE-202ENST00000417300 FDX1P10109 184 aa13.53□□□□□ -0.24
GABRE-202ENST00000417300 PSMC4P43686 418 aa13.53□□□□□ -0.24
GABRE-202ENST00000417300 MRPL12P52815 198 aaKnown RBP13.53□□□□□ -0.24
GABRE-202ENST00000417300 HMGCS2P54868 508 aa13.53□□□□□ -0.24
GABRE-202ENST00000417300 PPATQ06203 517 aa13.53□□□□□ -0.24
GABRE-202ENST00000417300 NONOQ15233 471 aaKnown RBP eCLIP13.53□□□□□ -0.242e-8■□□□□ 8.9
GABRE-202ENST00000417300 CCL15Q16663 113 aa13.53□□□□□ -0.24
GABRE-202ENST00000417300 ADALQ6DHV7 355 aa13.53□□□□□ -0.24
GABRE-202ENST00000417300 ERO1BQ86YB8 467 aa13.53□□□□□ -0.24
GABRE-202ENST00000417300 KIFC2Q96AC6 838 aa13.53□□□□□ -0.24
GABRE-202ENST00000417300 OPTNQ96CV9 577 aa13.53□□□□□ -0.24
GABRE-202ENST00000417300 RPAP3Q9H6T3 665 aaPredicted RBP13.53□□□□□ -0.24
GABRE-202ENST00000417300 TMOD4Q9NZQ9 345 aa13.53□□□□□ -0.24
GABRE-202ENST00000417300 PPP1R9AQ9ULJ8 1098 aa13.53□□□□□ -0.24
GABRE-202ENST00000417300 PCDHA7Q9UN72 937 aa13.53□□□□□ -0.24
GABRE-202ENST00000417300 BDP1A6H8Y1 2624 aa13.52□□□□□ -0.24
GABRE-202ENST00000417300 OSBPP22059 807 aa13.52□□□□□ -0.25
GABRE-202ENST00000417300 ME1P48163 572 aa13.52□□□□□ -0.25
GABRE-202ENST00000417300 GTF2A2P52657 109 aa13.52□□□□□ -0.25
GABRE-202ENST00000417300 SNAP25P60880 206 aa13.52□□□□□ -0.25
GABRE-202ENST00000417300 ORC2Q13416 577 aaPredicted RBP13.52□□□□□ -0.25
GABRE-202ENST00000417300 AXDND1Q5T1B0 1012 aaPredicted RBP13.52□□□□□ -0.25
GABRE-202ENST00000417300 MCTP2Q6DN12 878 aa13.52□□□□□ -0.25
GABRE-202ENST00000417300 ALYREFQ86V81 257 aaKnown RBP13.52□□□□□ -0.25
GABRE-202ENST00000417300 FAM43AQ8N2R8 423 aa13.52□□□□□ -0.25
GABRE-202ENST00000417300 MYLIPQ8WY64 445 aa13.52□□□□□ -0.25
GABRE-202ENST00000417300 SYAP1Q96A49 352 aaPredicted RBP13.52□□□□□ -0.25
GABRE-202ENST00000417300 TANGO6Q9C0B7 1094 aa13.52□□□□□ -0.25
GABRE-202ENST00000417300 PSTPIP2Q9H939 334 aa13.52□□□□□ -0.25
GABRE-202ENST00000417300 ELP3Q9H9T3 547 aa13.52□□□□□ -0.25
GABRE-202ENST00000417300 PNMA2Q9UL42 364 aa13.52□□□□□ -0.25
GABRE-202ENST00000417300 ABCB11O95342 1321 aa13.52□□□□□ -0.25
GABRE-202ENST00000417300 MYPNQ86TC9 1320 aa13.52□□□□□ -0.25
GABRE-202ENST00000417300 ZSWIM8A7E2V4 1837 aa13.52□□□□□ -0.25
GABRE-202ENST00000417300 WNT7AO00755 349 aa13.51□□□□□ -0.25
GABRE-202ENST00000417300 CXCL11O14625 94 aa13.51□□□□□ -0.25
GABRE-202ENST00000417300 CUTAO60888 179 aa13.51□□□□□ -0.25
GABRE-202ENST00000417300 FLOT1O75955 427 aa13.51□□□□□ -0.25
GABRE-202ENST00000417300 ICAM1P05362 532 aa13.51□□□□□ -0.25
GABRE-202ENST00000417300 FOSL2P15408 326 aa13.51□□□□□ -0.25
GABRE-202ENST00000417300 PTPREP23469 700 aa13.51□□□□□ -0.25
GABRE-202ENST00000417300 PPIL2Q13356 520 aa13.51□□□□□ -0.25
GABRE-202ENST00000417300 AP3B2Q13367 1082 aa13.51□□□□□ -0.25
GABRE-202ENST00000417300 INF2Q27J81 1249 aa13.51□□□□□ -0.25
GABRE-202ENST00000417300 JAKMIP3Q5VZ66 844 aa13.51□□□□□ -0.25
GABRE-202ENST00000417300 CAVIN1Q6NZI2 390 aaKnown RBP13.51□□□□□ -0.25
GABRE-202ENST00000417300 DEFB118Q96PH6 123 aa13.51□□□□□ -0.25
GABRE-202ENST00000417300 C1QTNF1Q9BXJ1 281 aa13.51□□□□□ -0.25
GABRE-202ENST00000417300 SEMA6BQ9H3T3 888 aa13.51□□□□□ -0.25
GABRE-202ENST00000417300 SLC38A10Q9HBR0 1119 aa13.51□□□□□ -0.25
GABRE-202ENST00000417300 TMEM63CQ9P1W3 806 aa13.51□□□□□ -0.25
GABRE-202ENST00000417300 KCNH4Q9UQ05 1017 aa13.51□□□□□ -0.25
GABRE-202ENST00000417300 SMCHD1A6NHR9 2005 aa13.51□□□□□ -0.25
GABRE-202ENST00000417300 A0A0G2JMZ2 1700 aa13.5□□□□□ -0.25
GABRE-202ENST00000417300 ZNF536O15090 1300 aa13.5□□□□□ -0.25
GABRE-202ENST00000417300 PIK3CDO00329 1044 aa13.5□□□□□ -0.25
GABRE-202ENST00000417300 MEIS2O14770 477 aa13.5□□□□□ -0.25
GABRE-202ENST00000417300 ATP2B1P20020 1258 aa13.5□□□□□ -0.25
GABRE-202ENST00000417300 MARCKSP29966 332 aaPredicted RBP13.5□□□□□ -0.25
GABRE-202ENST00000417300 ATP2C1P98194 919 aaPredicted RBP13.5□□□□□ -0.25
GABRE-202ENST00000417300 USH1GQ495M9 461 aa13.5□□□□□ -0.25
GABRE-202ENST00000417300 CATSPERGQ6ZRH7 1159 aa13.5□□□□□ -0.25
GABRE-202ENST00000417300 NEK8Q86SG6 692 aa13.5□□□□□ -0.25
GABRE-202ENST00000417300 CCAR1Q8IX12 1150 aaKnown RBP13.5□□□□□ -0.25
GABRE-202ENST00000417300 KRI1Q8N9T8 703 aaKnown RBP13.5□□□□□ -0.25
GABRE-202ENST00000417300 PROCA1Q8NCQ7 364 aaPredicted RBP13.5□□□□□ -0.25
GABRE-202ENST00000417300 SLAIN1Q8ND83 568 aa13.5□□□□□ -0.25
GABRE-202ENST00000417300 MRPS27Q92552 414 aaKnown RBP13.5□□□□□ -0.25
GABRE-202ENST00000417300 DDX19AQ9NUU7 478 aaKnown RBP13.5□□□□□ -0.25
GABRE-202ENST00000417300 TMEM260Q9NX78 707 aa13.5□□□□□ -0.25
GABRE-202ENST00000417300 FBXO2Q9UK22 296 aaPredicted RBP13.5□□□□□ -0.25
GABRE-202ENST00000417300 MRPL11Q9Y3B7 192 aaKnown RBP13.5□□□□□ -0.25
GABRE-202ENST00000417300 SRPRBQ9Y5M8 271 aaKnown RBP13.5□□□□□ -0.25
GABRE-202ENST00000417300 MYH7BA7E2Y1 1941 aa13.5□□□□□ -0.25
GABRE-202ENST00000417300 ALPK3Q96L96 1907 aa13.5□□□□□ -0.25
GABRE-202ENST00000417300 COL11A1P12107 1806 aaPredicted RBP13.5□□□□□ -0.25
GABRE-202ENST00000417300 A0A0G2JLL6 359 aaPredicted RBP13.49□□□□□ -0.25
GABRE-202ENST00000417300 FAM237AA0A1B0GTK4 181 aa13.49□□□□□ -0.25
GABRE-202ENST00000417300 USP17L15C9J2P7 530 aa13.49□□□□□ -0.25
GABRE-202ENST00000417300 USP17L13C9JLJ4 530 aa13.49□□□□□ -0.25
GABRE-202ENST00000417300 USP17L11C9JVI0 530 aa13.49□□□□□ -0.25
GABRE-202ENST00000417300 USP17L18D6R9N7 530 aa13.49□□□□□ -0.25
GABRE-202ENST00000417300 USP17L22D6RA61 530 aa13.49□□□□□ -0.25
GABRE-202ENST00000417300 USP17L17D6RBQ6 530 aa13.49□□□□□ -0.25
GABRE-202ENST00000417300 USP17L19D6RCP7 530 aa13.49□□□□□ -0.25
GABRE-202ENST00000417300 USP17L20D6RJB6 530 aa13.49□□□□□ -0.25
GABRE-202ENST00000417300 OPLAHO14841 1288 aa13.49□□□□□ -0.25
GABRE-202ENST00000417300 FOSP01100 380 aaPredicted RBP13.49□□□□□ -0.25
GABRE-202ENST00000417300 LIG1P18858 919 aa13.49□□□□□ -0.25
GABRE-202ENST00000417300 CMA1P23946 247 aa13.49□□□□□ -0.25
GABRE-202ENST00000417300 DSG3P32926 999 aa13.49□□□□□ -0.25
GABRE-202ENST00000417300 USP17L24Q0WX57 530 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms