RNA–Protein interactions for RNA: ENST00000417292.5

SSB-204, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-204ENST00000417292 ADD3Q9UEY8 706 aaKnown RBP16.3■□□□□ 0.2
SSB-204ENST00000417292 LINC01553A4QN01 128 aa16.29■□□□□ 0.2
SSB-204ENST00000417292 PATL2C9JE40 543 aaKnown RBP16.29■□□□□ 0.2
SSB-204ENST00000417292 RNF113AO15541 343 aaKnown RBP16.29■□□□□ 0.2
SSB-204ENST00000417292 SMARCA5O60264 1052 aaPredicted RBP16.29■□□□□ 0.2
SSB-204ENST00000417292 NMT2O60551 498 aa16.29■□□□□ 0.2
SSB-204ENST00000417292 GNAT2P19087 354 aa16.29■□□□□ 0.2
SSB-204ENST00000417292 SSTR3P32745 418 aaPredicted RBP16.29■□□□□ 0.2
SSB-204ENST00000417292 ERVK-21P61565 698 aa16.29■□□□□ 0.2
SSB-204ENST00000417292 LRRFIP1Q32MZ4 808 aaKnown RBP16.29■□□□□ 0.2
SSB-204ENST00000417292 SLC30A10Q6XR72 485 aa16.29■□□□□ 0.2
SSB-204ENST00000417292 IL17RBQ9NRM6 502 aa16.29■□□□□ 0.2
SSB-204ENST00000417292 STX8Q9UNK0 236 aa16.29■□□□□ 0.2
SSB-204ENST00000417292 NOD1Q9Y239 953 aa16.29■□□□□ 0.2
SSB-204ENST00000417292 LOC102724159A0A0B4J2E5 919 aa16.28■□□□□ 0.2
SSB-204ENST00000417292 KPNA6O60684 536 aa16.28■□□□□ 0.2
SSB-204ENST00000417292 GJB5O95377 273 aa16.28■□□□□ 0.2
SSB-204ENST00000417292 NHLH1Q02575 133 aa16.28■□□□□ 0.2
SSB-204ENST00000417292 PDE4BQ07343 736 aa16.28■□□□□ 0.2
SSB-204ENST00000417292 PPP2R5BQ15173 497 aa16.28■□□□□ 0.2
SSB-204ENST00000417292 PWP2Q15269 919 aaKnown RBP16.28■□□□□ 0.2
SSB-204ENST00000417292 PTGISQ16647 500 aa16.28■□□□□ 0.2
SSB-204ENST00000417292 BRDTQ58F21 947 aaPredicted RBP16.28■□□□□ 0.2
SSB-204ENST00000417292 TTBK2Q6IQ55 1244 aa16.28■□□□□ 0.2
SSB-204ENST00000417292 AFAP1L1Q8TED9 768 aa16.28■□□□□ 0.2
SSB-204ENST00000417292 DHX38Q92620 1227 aaKnown RBP16.28■□□□□ 0.2
SSB-204ENST00000417292 TGS1Q96RS0 853 aaKnown RBP16.28■□□□□ 0.2
SSB-204ENST00000417292 RAD9AQ99638 391 aa16.28■□□□□ 0.2
SSB-204ENST00000417292 RANBP17Q9H2T7 1088 aaKnown RBP16.28■□□□□ 0.2
SSB-204ENST00000417292 ECHDC1Q9NTX5 307 aa16.28■□□□□ 0.2
SSB-204ENST00000417292 MTMR7Q9Y216 660 aa16.28■□□□□ 0.2
SSB-204ENST00000417292 RAD50Q92878 1312 aa16.27■□□□□ 0.2
SSB-204ENST00000417292 PTPDC1A2A3K4 754 aa16.27■□□□□ 0.2
SSB-204ENST00000417292 NKRFO15226 690 aaKnown RBP eCLIP16.27■□□□□ 0.2
SSB-204ENST00000417292 NBNO60934 754 aa16.27■□□□□ 0.2
SSB-204ENST00000417292 ALADP13716 330 aa16.27■□□□□ 0.2
SSB-204ENST00000417292 EDNRBP24530 442 aa16.27■□□□□ 0.2
SSB-204ENST00000417292 SLC16A2P36021 539 aa16.27■□□□□ 0.2
SSB-204ENST00000417292 CHMP4BP1P59074 171 aa16.27■□□□□ 0.2
SSB-204ENST00000417292 TSHZ3Q63HK5 1081 aa16.27■□□□□ 0.2
SSB-204ENST00000417292 PTCRAQ6ISU1 281 aaPredicted RBP16.27■□□□□ 0.2
SSB-204ENST00000417292 GDF6Q6KF10 455 aaPredicted RBP16.27■□□□□ 0.2
SSB-204ENST00000417292 CAGE1Q8TC20 777 aa16.27■□□□□ 0.2
SSB-204ENST00000417292 CLEC4DQ8WXI8 215 aa16.27■□□□□ 0.2
SSB-204ENST00000417292 LRRCC1Q9C099 1032 aa16.27■□□□□ 0.2
SSB-204ENST00000417292 INCENPQ9NQS7 918 aa16.27■□□□□ 0.2
SSB-204ENST00000417292 DDX19BQ9UMR2 479 aa16.27■□□□□ 0.2
SSB-204ENST00000417292 SIP14410 1827 aa16.26■□□□□ 0.19
SSB-204ENST00000417292 GRXCR2A6NFK2 248 aa16.26■□□□□ 0.19
SSB-204ENST00000417292 ARIH2O95376 493 aa16.26■□□□□ 0.19
SSB-204ENST00000417292 CXCL10P02778 98 aa16.26■□□□□ 0.19
SSB-204ENST00000417292 SELPP16109 830 aa16.26■□□□□ 0.19
SSB-204ENST00000417292 CALML3P27482 149 aa16.26■□□□□ 0.19
SSB-204ENST00000417292 PPARAQ07869 468 aa16.26■□□□□ 0.19
SSB-204ENST00000417292 CNKSR3Q6P9H4 555 aa16.26■□□□□ 0.19
SSB-204ENST00000417292 LRRC8DQ7L1W4 858 aa16.26■□□□□ 0.19
SSB-204ENST00000417292 SCFD2Q8WU76 684 aa16.26■□□□□ 0.19
SSB-204ENST00000417292 FBXL18Q96ME1 805 aa16.26■□□□□ 0.19
SSB-204ENST00000417292 SEC62Q99442 399 aaKnown RBP16.26■□□□□ 0.19
SSB-204ENST00000417292 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.26■□□□□ 0.19
SSB-204ENST00000417292 POTEB3A0JP26 581 aa16.25■□□□□ 0.19
SSB-204ENST00000417292 ZFYP08048 801 aaPredicted RBP16.25■□□□□ 0.19
SSB-204ENST00000417292 TXNP10599 105 aaKnown RBP16.25■□□□□ 0.19
SSB-204ENST00000417292 PDE4DQ08499 809 aa16.25■□□□□ 0.19
SSB-204ENST00000417292 RBL2Q08999 1139 aa16.25■□□□□ 0.19
SSB-204ENST00000417292 CCDC96Q2M329 555 aa16.25■□□□□ 0.19
SSB-204ENST00000417292 FAM117BQ6P1L5 589 aa16.25■□□□□ 0.19
SSB-204ENST00000417292 POTEBQ6S5H4 581 aa16.25■□□□□ 0.19
SSB-204ENST00000417292 SESTD1Q86VW0 696 aa16.25■□□□□ 0.19
SSB-204ENST00000417292 CCDC155Q8N6L0 562 aa16.25■□□□□ 0.19
SSB-204ENST00000417292 C17orf80Q9BSJ5 609 aa16.25■□□□□ 0.19
SSB-204ENST00000417292 CFAP54Q96N23 3096 aa16.25■□□□□ 0.19
SSB-204ENST00000417292 ABHD14A-ACY1A0A1B0GW23 586 aa16.24■□□□□ 0.19
SSB-204ENST00000417292 TSPY2A6NKD2 308 aa16.24■□□□□ 0.19
SSB-204ENST00000417292 H3BQ06 376 aaPredicted RBP16.24■□□□□ 0.19
SSB-204ENST00000417292 DCXO43602 365 aa16.24■□□□□ 0.19
SSB-204ENST00000417292 SLC3A2P08195 630 aaKnown RBP16.24■□□□□ 0.19
SSB-204ENST00000417292 CKBP12277 381 aa16.24■□□□□ 0.19
SSB-204ENST00000417292 NOVP48745 357 aa16.24■□□□□ 0.19
SSB-204ENST00000417292 RPS6P62753 249 aaKnown RBP16.24■□□□□ 0.19
SSB-204ENST00000417292 CSPP1Q1MSJ5 1256 aa16.24■□□□□ 0.19
SSB-204ENST00000417292 BTNL9Q6UXG8 535 aa16.24■□□□□ 0.19
SSB-204ENST00000417292 RNF207Q6ZRF8 634 aa16.24■□□□□ 0.19
SSB-204ENST00000417292 NEK9Q8TD19 979 aa16.24■□□□□ 0.19
SSB-204ENST00000417292 AFG1LQ8WV93 481 aa16.24■□□□□ 0.19
SSB-204ENST00000417292 ANKS1AQ92625 1134 aa16.24■□□□□ 0.19
SSB-204ENST00000417292 KAT2BQ92831 832 aa16.24■□□□□ 0.19
SSB-204ENST00000417292 NACAP1Q9BZK3 213 aa16.24■□□□□ 0.19
SSB-204ENST00000417292 NAPBQ9H115 298 aa16.24■□□□□ 0.19
SSB-204ENST00000417292 PPP4R3BQ5MIZ7 849 aa16.23■□□□□ 0.19
SSB-204ENST00000417292 SYDE2Q5VT97 1194 aa16.23■□□□□ 0.19
SSB-204ENST00000417292 CCDC62Q6P9F0 684 aa16.23■□□□□ 0.19
SSB-204ENST00000417292 TRAF7Q6Q0C0 670 aa16.23■□□□□ 0.19
SSB-204ENST00000417292 DCAF4Q8WV16 495 aa16.23■□□□□ 0.19
SSB-204ENST00000417292 SNX27Q96L92 541 aa16.23■□□□□ 0.19
SSB-204ENST00000417292 FRMPD2Q68DX3 1309 aaPredicted RBP16.22■□□□□ 0.19
SSB-204ENST00000417292 FOXP2O15409 715 aa16.22■□□□□ 0.19
SSB-204ENST00000417292 PARNO95453 639 aaKnown RBP16.22■□□□□ 0.19
SSB-204ENST00000417292 MMP3P08254 477 aa16.22■□□□□ 0.19
SSB-204ENST00000417292 CTDSPL2Q05D32 466 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms