RNA–Protein interactions for RNA: ENST00000417043.5

RHBDF1-202, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 3

Gene RHBDF1, Length 816 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-202ENST00000417043 CCDC178Q5BJE1 867 aa18.24■□□□□ 0.51
RHBDF1-202ENST00000417043 HERVK_113Q902F9 699 aa18.24■□□□□ 0.51
RHBDF1-202ENST00000417043 VWCEQ96DN2 955 aa18.24■□□□□ 0.51
RHBDF1-202ENST00000417043 JMJD4Q9H9V9 463 aa18.24■□□□□ 0.51
RHBDF1-202ENST00000417043 POLR3EQ9NVU0 708 aa18.24■□□□□ 0.51
RHBDF1-202ENST00000417043 SCN10AQ9Y5Y9 1956 aa18.23■□□□□ 0.51
RHBDF1-202ENST00000417043 DHX16O60231 1041 aaKnown RBP18.23■□□□□ 0.51
RHBDF1-202ENST00000417043 GSPT1P15170 499 aaKnown RBP18.23■□□□□ 0.51
RHBDF1-202ENST00000417043 QRICH1Q2TAL8 776 aa18.23■□□□□ 0.51
RHBDF1-202ENST00000417043 NBPF20Q3BBV1 942 aa18.23■□□□□ 0.51
RHBDF1-202ENST00000417043 FAM47CQ5HY64 1035 aa18.23■□□□□ 0.51
RHBDF1-202ENST00000417043 CYB5R4Q7L1T6 521 aa18.23■□□□□ 0.51
RHBDF1-202ENST00000417043 STAG2Q8N3U4 1231 aa18.23■□□□□ 0.51
RHBDF1-202ENST00000417043 RGS22Q8NE09 1264 aa18.23■□□□□ 0.51
RHBDF1-202ENST00000417043 SYTL5Q8TDW5 730 aaPredicted RBP18.23■□□□□ 0.51
RHBDF1-202ENST00000417043 SCFD2Q8WU76 684 aa18.23■□□□□ 0.51
RHBDF1-202ENST00000417043 MTG1Q9BT17 334 aaPredicted RBP18.23■□□□□ 0.51
RHBDF1-202ENST00000417043 SEZ6LQ9BYH1 1024 aa18.23■□□□□ 0.51
RHBDF1-202ENST00000417043 KRT23Q9C075 422 aa18.23■□□□□ 0.51
RHBDF1-202ENST00000417043 GPHNQ9NQX3 736 aaPredicted RBP18.23■□□□□ 0.51
RHBDF1-202ENST00000417043 CTNNA3Q9UI47 895 aa18.23■□□□□ 0.51
RHBDF1-202ENST00000417043 BAZ2BQ9UIF8 2168 aaKnown RBP18.23■□□□□ 0.51
RHBDF1-202ENST00000417043 CHD7Q9P2D1 2997 aa18.22■□□□□ 0.51
RHBDF1-202ENST00000417043 PARP1P09874 1014 aaKnown RBP18.22■□□□□ 0.51
RHBDF1-202ENST00000417043 CHMP4BP1P59074 171 aa18.22■□□□□ 0.51
RHBDF1-202ENST00000417043 IRX6P78412 446 aaPredicted RBP18.22■□□□□ 0.51
RHBDF1-202ENST00000417043 ASPRV1Q53RT3 343 aa18.22■□□□□ 0.51
RHBDF1-202ENST00000417043 SEPT14Q6ZU15 432 aa18.22■□□□□ 0.51
RHBDF1-202ENST00000417043 USP38Q8NB14 1042 aa18.22■□□□□ 0.51
RHBDF1-202ENST00000417043 MPHOSPH6Q99547 160 aaKnown RBP18.22■□□□□ 0.51
RHBDF1-202ENST00000417043 ABCB11O95342 1321 aa18.22■□□□□ 0.51
RHBDF1-202ENST00000417043 TRIP12Q14669 1992 aaPredicted RBP18.21■□□□□ 0.51
RHBDF1-202ENST00000417043 A6NJR5 290 aa18.21■□□□□ 0.51
RHBDF1-202ENST00000417043 NKRFO15226 690 aaKnown RBP eCLIP18.21■□□□□ 0.51
RHBDF1-202ENST00000417043 LY6KQ17RY6 165 aa18.21■□□□□ 0.51
RHBDF1-202ENST00000417043 TTC22Q5TAA0 569 aa18.21■□□□□ 0.51
RHBDF1-202ENST00000417043 FBXO11Q86XK2 927 aa18.21■□□□□ 0.51
RHBDF1-202ENST00000417043 UBAC1Q9BSL1 405 aa18.21■□□□□ 0.51
RHBDF1-202ENST00000417043 PRDM12Q9H4Q4 367 aa18.21■□□□□ 0.51
RHBDF1-202ENST00000417043 YBX2Q9Y2T7 364 aaKnown RBP18.21■□□□□ 0.51
RHBDF1-202ENST00000417043 KIAA1217Q5T5P2 1943 aa18.21■□□□□ 0.51
RHBDF1-202ENST00000417043 RBAK-RBAKDNI3L0D1 243 aa18.2■□□□□ 0.5
RHBDF1-202ENST00000417043 RABGGTBP53611 331 aa18.2■□□□□ 0.5
RHBDF1-202ENST00000417043 PTH1RQ03431 593 aa18.2■□□□□ 0.5
RHBDF1-202ENST00000417043 TTLL4Q14679 1199 aa18.2■□□□□ 0.5
RHBDF1-202ENST00000417043 SEC23AQ15436 765 aa18.2■□□□□ 0.5
RHBDF1-202ENST00000417043 IFIT1BQ5T764 474 aaKnown RBP18.2■□□□□ 0.5
RHBDF1-202ENST00000417043 CCDC62Q6P9F0 684 aa18.2■□□□□ 0.5
RHBDF1-202ENST00000417043 CHST3Q7LGC8 479 aa18.2■□□□□ 0.5
RHBDF1-202ENST00000417043 DEFB128Q7Z7B8 93 aa18.2■□□□□ 0.5
RHBDF1-202ENST00000417043 NSUN6Q8TEA1 469 aaKnown RBP18.2■□□□□ 0.5
RHBDF1-202ENST00000417043 RMDN3Q96TC7 470 aa18.2■□□□□ 0.5
RHBDF1-202ENST00000417043 NKX2-4Q9H2Z4 354 aa18.2■□□□□ 0.5
RHBDF1-202ENST00000417043 CNNM2Q9H8M5 875 aa18.2■□□□□ 0.5
RHBDF1-202ENST00000417043 MYH7BA7E2Y1 1941 aa18.19■□□□□ 0.5
RHBDF1-202ENST00000417043 B4DLN1 442 aa18.19■□□□□ 0.5
RHBDF1-202ENST00000417043 SUPT20HL2P0C7V6 817 aa18.19■□□□□ 0.5
RHBDF1-202ENST00000417043 MYOGP15173 224 aa18.19■□□□□ 0.5
RHBDF1-202ENST00000417043 NT5C2P49902 561 aa18.19■□□□□ 0.5
RHBDF1-202ENST00000417043 MRPL12P52815 198 aaKnown RBP18.19■□□□□ 0.5
RHBDF1-202ENST00000417043 BRDTQ58F21 947 aaPredicted RBP18.19■□□□□ 0.5
RHBDF1-202ENST00000417043 RPUSD2Q8IZ73 545 aaKnown RBP18.19■□□□□ 0.5
RHBDF1-202ENST00000417043 AFG1LQ8WV93 481 aa18.19■□□□□ 0.5
RHBDF1-202ENST00000417043 PPM1EQ8WY54 764 aa18.19■□□□□ 0.5
RHBDF1-202ENST00000417043 SENP2Q9HC62 589 aa18.19■□□□□ 0.5
RHBDF1-202ENST00000417043 MSRAQ9UJ68 235 aa18.19■□□□□ 0.5
RHBDF1-202ENST00000417043 MRPL11Q9Y3B7 192 aaKnown RBP18.19■□□□□ 0.5
RHBDF1-202ENST00000417043 TAF6LQ9Y6J9 622 aa18.19■□□□□ 0.5
RHBDF1-202ENST00000417043 RAD50Q92878 1312 aa18.19■□□□□ 0.5
RHBDF1-202ENST00000417043 TET1Q8NFU7 2136 aa18.19■□□□□ 0.5
RHBDF1-202ENST00000417043 ZBBXA8MT70 800 aa18.18■□□□□ 0.5
RHBDF1-202ENST00000417043 KLRF2D3W0D1 207 aa18.18■□□□□ 0.5
RHBDF1-202ENST00000417043 OPLAHO14841 1288 aa18.18■□□□□ 0.5
RHBDF1-202ENST00000417043 PPP1R11O60927 126 aaPredicted RBP18.18■□□□□ 0.5
RHBDF1-202ENST00000417043 CFBP00751 764 aa18.18■□□□□ 0.5
RHBDF1-202ENST00000417043 EIF2AK2P19525 551 aaKnown RBP18.18■□□□□ 0.5
RHBDF1-202ENST00000417043 ARHGEF16Q5VV41 709 aa18.18■□□□□ 0.5
RHBDF1-202ENST00000417043 MCF2L2Q86YR7 1114 aa18.18■□□□□ 0.5
RHBDF1-202ENST00000417043 PRDM6Q9NQX0 595 aa18.18■□□□□ 0.5
RHBDF1-202ENST00000417043 MAD2L2Q9UI95 211 aa18.18■□□□□ 0.5
RHBDF1-202ENST00000417043 KPNA6O60684 536 aa18.17■□□□□ 0.5
RHBDF1-202ENST00000417043 CYP21A2P08686 494 aa18.17■□□□□ 0.5
RHBDF1-202ENST00000417043 ARHGAP1Q07960 439 aa18.17■□□□□ 0.5
RHBDF1-202ENST00000417043 STXBP2Q15833 593 aa18.17■□□□□ 0.5
RHBDF1-202ENST00000417043 SLC35G1Q2M3R5 365 aa18.17■□□□□ 0.5
RHBDF1-202ENST00000417043 NFRKBQ6P4R8 1299 aa18.17■□□□□ 0.5
RHBDF1-202ENST00000417043 MTIF3Q9H2K0 278 aaKnown RBP18.17■□□□□ 0.5
RHBDF1-202ENST00000417043 SLC4A7Q9Y6M7 1214 aa18.17■□□□□ 0.5
RHBDF1-202ENST00000417043 REV3LO60673 3130 aa18.16■□□□□ 0.5
RHBDF1-202ENST00000417043 GH1P01241 217 aa18.16■□□□□ 0.5
RHBDF1-202ENST00000417043 NR3C2P08235 984 aa18.16■□□□□ 0.5
RHBDF1-202ENST00000417043 MMP3P08254 477 aa18.16■□□□□ 0.5
RHBDF1-202ENST00000417043 CHMLP26374 656 aa18.16■□□□□ 0.5
RHBDF1-202ENST00000417043 ADGRE1Q14246 886 aa18.16■□□□□ 0.5
RHBDF1-202ENST00000417043 RAB30Q15771 203 aa18.16■□□□□ 0.5
RHBDF1-202ENST00000417043 IWS1Q96ST2 819 aa18.16■□□□□ 0.5
RHBDF1-202ENST00000417043 GAS2L1Q99501 681 aaPredicted RBP18.16■□□□□ 0.5
RHBDF1-202ENST00000417043 AMNQ9BXJ7 453 aa18.16■□□□□ 0.5
RHBDF1-202ENST00000417043 PXMP2Q9NR77 195 aa18.16■□□□□ 0.5
RHBDF1-202ENST00000417043 PALM3A6NDB9 673 aaPredicted RBP18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms