RNA–Protein interactions for RNA: ENST00000416778.5

CPNE1-210, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-210ENST00000416778 ARIH2O95376 493 aa20.79■□□□□ 0.92
CPNE1-210ENST00000416778 TXNP10599 105 aaKnown RBP20.79■□□□□ 0.92
CPNE1-210ENST00000416778 GHRHRQ02643 423 aa20.79■□□□□ 0.92
CPNE1-210ENST00000416778 SART3Q15020 963 aaKnown RBP20.79■□□□□ 0.92
CPNE1-210ENST00000416778 NECTIN1Q15223 517 aa20.79■□□□□ 0.92
CPNE1-210ENST00000416778 TMEM67Q5HYA8 995 aa20.79■□□□□ 0.92
CPNE1-210ENST00000416778 CENPQQ7L2Z9 268 aaPredicted RBP20.79■□□□□ 0.92
CPNE1-210ENST00000416778 OR6J1Q8NGC5 347 aa20.79■□□□□ 0.92
CPNE1-210ENST00000416778 POLR3EQ9NVU0 708 aa20.79■□□□□ 0.92
CPNE1-210ENST00000416778 PCDHA1Q9Y5I3 950 aa20.79■□□□□ 0.92
CPNE1-210ENST00000416778 COL6A3P12111 3177 aa20.78■□□□□ 0.92
CPNE1-210ENST00000416778 A6NJR5 290 aa20.78■□□□□ 0.92
CPNE1-210ENST00000416778 HSD17B4P51659 736 aa20.78■□□□□ 0.92
CPNE1-210ENST00000416778 PURAQ00577 322 aaKnown RBP20.78■□□□□ 0.92
CPNE1-210ENST00000416778 TTLL4Q14679 1199 aa20.78■□□□□ 0.92
CPNE1-210ENST00000416778 STXBP2Q15833 593 aa20.78■□□□□ 0.92
CPNE1-210ENST00000416778 PIGSQ96S52 555 aa20.78■□□□□ 0.92
CPNE1-210ENST00000416778 TRPV6Q9H1D0 765 aa20.78■□□□□ 0.92
CPNE1-210ENST00000416778 GPHNQ9NQX3 736 aaPredicted RBP20.78■□□□□ 0.92
CPNE1-210ENST00000416778 MAP3K20Q9NYL2 800 aaKnown RBP20.78■□□□□ 0.92
CPNE1-210ENST00000416778 CFBP00751 764 aa20.77■□□□□ 0.92
CPNE1-210ENST00000416778 CPT1AP50416 773 aa20.77■□□□□ 0.92
CPNE1-210ENST00000416778 COL9A3Q14050 684 aaPredicted RBP20.77■□□□□ 0.92
CPNE1-210ENST00000416778 PPP2R5BQ15173 497 aa20.77■□□□□ 0.92
CPNE1-210ENST00000416778 CATIPQ7Z7H3 387 aa20.77■□□□□ 0.92
CPNE1-210ENST00000416778 SAMD3Q8N6K7 520 aa20.77■□□□□ 0.92
CPNE1-210ENST00000416778 MTA3Q9BTC8 594 aa20.77■□□□□ 0.92
CPNE1-210ENST00000416778 LY9Q9HBG7 655 aa20.77■□□□□ 0.92
CPNE1-210ENST00000416778 PNMA6FA0A0J9YX94 578 aa20.76■□□□□ 0.91
CPNE1-210ENST00000416778 SLC27A2O14975 620 aa20.76■□□□□ 0.91
CPNE1-210ENST00000416778 KPNA6O60684 536 aa20.76■□□□□ 0.91
CPNE1-210ENST00000416778 EIF3JO75822 258 aaKnown RBP20.76■□□□□ 0.91
CPNE1-210ENST00000416778 NR3C2P08235 984 aa20.76■□□□□ 0.91
CPNE1-210ENST00000416778 MYL3P08590 195 aa20.76■□□□□ 0.91
CPNE1-210ENST00000416778 CSF2RAP15509 400 aa20.76■□□□□ 0.91
CPNE1-210ENST00000416778 CYP2C18P33260 490 aa20.76■□□□□ 0.91
CPNE1-210ENST00000416778 SMAD3P84022 425 aaKnown RBP20.76■□□□□ 0.91
CPNE1-210ENST00000416778 BMP2KLQ5H9B9 411 aa20.76■□□□□ 0.91
CPNE1-210ENST00000416778 ARHGEF16Q5VV41 709 aa20.76■□□□□ 0.91
CPNE1-210ENST00000416778 SEPT14Q6ZU15 432 aa20.76■□□□□ 0.91
CPNE1-210ENST00000416778 TMEM199Q8N511 208 aa20.76■□□□□ 0.91
CPNE1-210ENST00000416778 MAP3K14Q99558 947 aa20.76■□□□□ 0.91
CPNE1-210ENST00000416778 MTG1Q9BT17 334 aaPredicted RBP20.76■□□□□ 0.91
CPNE1-210ENST00000416778 PXMP2Q9NR77 195 aa20.76■□□□□ 0.91
CPNE1-210ENST00000416778 B4GALT4O60513 344 aa20.75■□□□□ 0.91
CPNE1-210ENST00000416778 PPIGQ13427 754 aaKnown RBP eCLIP20.75■□□□□ 0.911e-11■■□□□ 11.7
CPNE1-210ENST00000416778 LY6KQ17RY6 165 aa20.75■□□□□ 0.91
CPNE1-210ENST00000416778 BRDTQ58F21 947 aaPredicted RBP20.75■□□□□ 0.91
CPNE1-210ENST00000416778 TMEM240Q5SV17 173 aa20.75■□□□□ 0.91
CPNE1-210ENST00000416778 CREB3L3Q68CJ9 461 aa20.75■□□□□ 0.91
CPNE1-210ENST00000416778 HOMER1Q86YM7 354 aa20.75■□□□□ 0.91
CPNE1-210ENST00000416778 TMTC2Q8N394 836 aa20.75■□□□□ 0.91
CPNE1-210ENST00000416778 RNPC3Q96LT9 517 aaKnown RBP20.75■□□□□ 0.91
CPNE1-210ENST00000416778 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.75■□□□□ 0.915e-13■■■■■ 64.1
CPNE1-210ENST00000416778 PPP1R12CQ9BZL4 782 aa20.75■□□□□ 0.91
CPNE1-210ENST00000416778 ALDH8A1Q9H2A2 487 aaPredicted RBP20.75■□□□□ 0.91
CPNE1-210ENST00000416778 DDX41Q9UJV9 622 aaKnown RBP20.75■□□□□ 0.91
CPNE1-210ENST00000416778 LRRC37A2A6NM11 1700 aa20.74■□□□□ 0.91
CPNE1-210ENST00000416778 PRC1O43663 620 aa20.74■□□□□ 0.91
CPNE1-210ENST00000416778 EIF2AK2P19525 551 aaKnown RBP20.74■□□□□ 0.91
CPNE1-210ENST00000416778 SMARCA1P28370 1054 aa20.74■□□□□ 0.91
CPNE1-210ENST00000416778 MCM5P33992 734 aa20.74■□□□□ 0.91
CPNE1-210ENST00000416778 TRAF1Q13077 416 aa20.74■□□□□ 0.91
CPNE1-210ENST00000416778 NBPF20Q3BBV1 942 aa20.74■□□□□ 0.91
CPNE1-210ENST00000416778 VSIG10LQ86VR7 867 aa20.74■□□□□ 0.91
CPNE1-210ENST00000416778 SEMA6BQ9H3T3 888 aa20.74■□□□□ 0.91
CPNE1-210ENST00000416778 STXBP5LQ9Y2K9 1186 aa20.74■□□□□ 0.91
CPNE1-210ENST00000416778 ACRP10323 421 aa20.73■□□□□ 0.91
CPNE1-210ENST00000416778 HOXA13P31271 388 aaPredicted RBP20.73■□□□□ 0.91
CPNE1-210ENST00000416778 RASIP1Q5U651 963 aa20.73■□□□□ 0.91
CPNE1-210ENST00000416778 CASC1Q6TDU7 716 aa20.73■□□□□ 0.91
CPNE1-210ENST00000416778 ZNF654Q8IZM8 581 aa20.73■□□□□ 0.91
CPNE1-210ENST00000416778 PDCD2LQ9BRP1 358 aa20.73■□□□□ 0.91
CPNE1-210ENST00000416778 NOC4LQ9BVI4 516 aaKnown RBP20.73■□□□□ 0.91
CPNE1-210ENST00000416778 HIPK3Q9H422 1215 aa20.73■□□□□ 0.91
CPNE1-210ENST00000416778 UMODL1Q5DID0 1318 aa20.73■□□□□ 0.91
CPNE1-210ENST00000416778 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.72■□□□□ 0.91
CPNE1-210ENST00000416778 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.72■□□□□ 0.91
CPNE1-210ENST00000416778 RGS20O76081 388 aa20.72■□□□□ 0.91
CPNE1-210ENST00000416778 GH1P01241 217 aa20.72■□□□□ 0.91
CPNE1-210ENST00000416778 ARHGAP1Q07960 439 aa20.72■□□□□ 0.91
CPNE1-210ENST00000416778 ZNF365Q70YC5 407 aa20.72■□□□□ 0.91
CPNE1-210ENST00000416778 AFG1LQ8WV93 481 aa20.72■□□□□ 0.91
CPNE1-210ENST00000416778 TMEM87BQ96K49 555 aa20.72■□□□□ 0.91
CPNE1-210ENST00000416778 GUCD1Q96NT3 240 aa20.72■□□□□ 0.91
CPNE1-210ENST00000416778 MYL10Q9BUA6 226 aa20.72■□□□□ 0.91
CPNE1-210ENST00000416778 ANO2Q9NQ90 1003 aa20.72■□□□□ 0.91
CPNE1-210ENST00000416778 TRMT13Q9NUP7 481 aaKnown RBP20.72■□□□□ 0.91
CPNE1-210ENST00000416778 BAZ2BQ9UIF8 2168 aaKnown RBP20.71■□□□□ 0.91
CPNE1-210ENST00000416778 GCOM1H8Y6P7 765 aaPredicted RBP20.71■□□□□ 0.91
CPNE1-210ENST00000416778 SH2B2O14492 632 aaPredicted RBP20.71■□□□□ 0.91
CPNE1-210ENST00000416778 DDAH1O94760 285 aa20.71■□□□□ 0.91
CPNE1-210ENST00000416778 SUPT20HL2P0C7V6 817 aa20.71■□□□□ 0.91
CPNE1-210ENST00000416778 POLR2MP0CAP2 368 aa20.71■□□□□ 0.91
CPNE1-210ENST00000416778 LIFRP42702 1097 aa20.71■□□□□ 0.91
CPNE1-210ENST00000416778 NFRKBQ6P4R8 1299 aa20.71■□□□□ 0.91
CPNE1-210ENST00000416778 VWCEQ96DN2 955 aa20.71■□□□□ 0.91
CPNE1-210ENST00000416778 FAM161BQ96MY7 647 aa20.71■□□□□ 0.91
CPNE1-210ENST00000416778 IL23AQ9NPF7 189 aa20.71■□□□□ 0.91
CPNE1-210ENST00000416778 A0A0C4DFX4 3053 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms