RNA–Protein interactions for RNA: ENST00000415395.6

RFFL-205, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-205ENST00000415395 LONP1P36776 959 aaKnown RBP13.02□□□□□ -0.32
RFFL-205ENST00000415395 BACE1P56817 501 aa13.02□□□□□ -0.32
RFFL-205ENST00000415395 UBASH3AP57075 661 aa13.02□□□□□ -0.32
RFFL-205ENST00000415395 JAKMIP3Q5VZ66 844 aa13.02□□□□□ -0.32
RFFL-205ENST00000415395 E4F1Q66K89 784 aaPredicted RBP13.02□□□□□ -0.32
RFFL-205ENST00000415395 PRPF38AQ8NAV1 312 aaKnown RBP13.02□□□□□ -0.32
RFFL-205ENST00000415395 CSRNP2Q9H175 543 aa13.02□□□□□ -0.32
RFFL-205ENST00000415395 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.02□□□□□ -0.33
RFFL-205ENST00000415395 PIK3CDO00329 1044 aa13.02□□□□□ -0.33
RFFL-205ENST00000415395 GCFC2P16383 781 aaKnown RBP13.02□□□□□ -0.33
RFFL-205ENST00000415395 ETF1P62495 437 aaKnown RBP13.02□□□□□ -0.33
RFFL-205ENST00000415395 NCAPHQ15003 741 aa13.02□□□□□ -0.33
RFFL-205ENST00000415395 ELF2Q15723 593 aa13.02□□□□□ -0.33
RFFL-205ENST00000415395 ZYXQ15942 572 aaKnown RBP13.02□□□□□ -0.33
RFFL-205ENST00000415395 PPP4R3AQ6IN85 833 aa13.02□□□□□ -0.33
RFFL-205ENST00000415395 KANK3Q6NY19 840 aa13.02□□□□□ -0.33
RFFL-205ENST00000415395 ARMCX5Q6P1M9 558 aa13.02□□□□□ -0.33
RFFL-205ENST00000415395 MNS1Q8NEH6 495 aa13.02□□□□□ -0.33
RFFL-205ENST00000415395 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.02□□□□□ -0.33
RFFL-205ENST00000415395 ABCB11O95342 1321 aa13.02□□□□□ -0.33
RFFL-205ENST00000415395 RBBP6Q7Z6E9 1792 aaKnown RBP13.01□□□□□ -0.33
RFFL-205ENST00000415395 BIN1O00499 593 aa13.01□□□□□ -0.33
RFFL-205ENST00000415395 ARHGAP6O43182 974 aa13.01□□□□□ -0.33
RFFL-205ENST00000415395 PPP1R12BO60237 982 aaPredicted RBP13.01□□□□□ -0.33
RFFL-205ENST00000415395 USP2O75604 605 aaPredicted RBP13.01□□□□□ -0.33
RFFL-205ENST00000415395 NF2P35240 595 aa13.01□□□□□ -0.33
RFFL-205ENST00000415395 KMT5BQ4FZB7 885 aa13.01□□□□□ -0.33
RFFL-205ENST00000415395 CT47A1Q5JQC4 288 aaPredicted RBP13.01□□□□□ -0.33
RFFL-205ENST00000415395 PRAMEF18Q5VWM3 479 aa13.01□□□□□ -0.33
RFFL-205ENST00000415395 MOXD1Q6UVY6 613 aa13.01□□□□□ -0.33
RFFL-205ENST00000415395 SYT10Q6XYQ8 523 aa13.01□□□□□ -0.33
RFFL-205ENST00000415395 KRT26Q7Z3Y9 468 aa13.01□□□□□ -0.33
RFFL-205ENST00000415395 CCDC84Q86UT8 332 aaPredicted RBP13.01□□□□□ -0.33
RFFL-205ENST00000415395 PNMA8AQ86V59 439 aaPredicted RBP13.01□□□□□ -0.33
RFFL-205ENST00000415395 KIFC2Q96AC6 838 aa13.01□□□□□ -0.33
RFFL-205ENST00000415395 SLF1Q9BQI6 1058 aa13.01□□□□□ -0.33
RFFL-205ENST00000415395 TMEM260Q9NX78 707 aa13.01□□□□□ -0.33
RFFL-205ENST00000415395 ZHX1Q9UKY1 873 aaPredicted RBP13.01□□□□□ -0.33
RFFL-205ENST00000415395 MRPL11Q9Y3B7 192 aaKnown RBP13.01□□□□□ -0.33
RFFL-205ENST00000415395 PTPRFP10586 1907 aa13.01□□□□□ -0.33
RFFL-205ENST00000415395 MEIS2O14770 477 aa13□□□□□ -0.33
RFFL-205ENST00000415395 ATP8B1O43520 1251 aa13□□□□□ -0.33
RFFL-205ENST00000415395 CCNT1O60563 726 aaKnown RBP13□□□□□ -0.33
RFFL-205ENST00000415395 OR52Z1P0C646 297 aa13□□□□□ -0.33
RFFL-205ENST00000415395 VCAM1P19320 739 aa13□□□□□ -0.33
RFFL-205ENST00000415395 USP11P51784 963 aa13□□□□□ -0.33
RFFL-205ENST00000415395 MAP3K9P80192 1104 aa13□□□□□ -0.33
RFFL-205ENST00000415395 GRIN1Q05586 938 aa13□□□□□ -0.33
RFFL-205ENST00000415395 SPP2Q13103 211 aa13□□□□□ -0.33
RFFL-205ENST00000415395 MTMR2Q13614 643 aa13□□□□□ -0.33
RFFL-205ENST00000415395 LETM2Q2VYF4 491 aa13□□□□□ -0.33
RFFL-205ENST00000415395 DTHD1Q6ZMT9 781 aa13□□□□□ -0.33
RFFL-205ENST00000415395 VSTM4Q8IW00 320 aa13□□□□□ -0.33
RFFL-205ENST00000415395 SAMD3Q8N6K7 520 aa13□□□□□ -0.33
RFFL-205ENST00000415395 TRIML1Q8N9V2 468 aa13□□□□□ -0.33
RFFL-205ENST00000415395 CNNM3Q8NE01 707 aa13□□□□□ -0.33
RFFL-205ENST00000415395 RBM46Q8TBY0 533 aaKnown RBP13□□□□□ -0.33
RFFL-205ENST00000415395 UBXN4Q92575 508 aa13□□□□□ -0.33
RFFL-205ENST00000415395 ZKSCAN4Q969J2 545 aaPredicted RBP13□□□□□ -0.33
RFFL-205ENST00000415395 AK8Q96MA6 479 aa13□□□□□ -0.33
RFFL-205ENST00000415395 EMILIN3Q9NT22 766 aa13□□□□□ -0.33
RFFL-205ENST00000415395 DNAI1Q9UI46 699 aa13□□□□□ -0.33
RFFL-205ENST00000415395 VWA3AA6NCI4 1184 aa12.99□□□□□ -0.33
RFFL-205ENST00000415395 ICAM1P05362 532 aa12.99□□□□□ -0.33
RFFL-205ENST00000415395 TXLNAP40222 546 aa12.99□□□□□ -0.33
RFFL-205ENST00000415395 IREB2P48200 963 aaKnown RBP12.99□□□□□ -0.33
RFFL-205ENST00000415395 UBE2SQ16763 222 aa12.99□□□□□ -0.33
RFFL-205ENST00000415395 FBXO38Q6PIJ6 1188 aa12.99□□□□□ -0.33
RFFL-205ENST00000415395 KRBA2Q6ZNG9 492 aa12.99□□□□□ -0.33
RFFL-205ENST00000415395 ERCC4Q92889 916 aaPredicted RBP12.99□□□□□ -0.33
RFFL-205ENST00000415395 ANO3Q9BYT9 981 aa12.99□□□□□ -0.33
RFFL-205ENST00000415395 TAF1DQ9H5J8 278 aaPredicted RBP12.99□□□□□ -0.33
RFFL-205ENST00000415395 RLFQ13129 1914 aa12.99□□□□□ -0.33
RFFL-205ENST00000415395 H2AFXP16104 143 aaPredicted RBP12.99□□□□□ -0.33
RFFL-205ENST00000415395 USH1GQ495M9 461 aa12.99□□□□□ -0.33
RFFL-205ENST00000415395 SH3D19Q5HYK7 790 aa12.99□□□□□ -0.33
RFFL-205ENST00000415395 MLKLQ8NB16 471 aa12.99□□□□□ -0.33
RFFL-205ENST00000415395 SYMPKQ92797 1274 aaKnown RBP12.99□□□□□ -0.33
RFFL-205ENST00000415395 FAM53CQ9NYF3 392 aa12.99□□□□□ -0.33
RFFL-205ENST00000415395 PPP1R9AQ9ULJ8 1098 aa12.99□□□□□ -0.33
RFFL-205ENST00000415395 AFG3L2Q9Y4W6 797 aa12.99□□□□□ -0.33
RFFL-205ENST00000415395 CSADQ9Y600 493 aa12.99□□□□□ -0.33
RFFL-205ENST00000415395 ZHX2Q9Y6X8 837 aa12.99□□□□□ -0.33
RFFL-205ENST00000415395 LOC285556D6RIA3 1793 aa12.99□□□□□ -0.33
RFFL-205ENST00000415395 SMCHD1A6NHR9 2005 aa12.98□□□□□ -0.33
RFFL-205ENST00000415395 MYPNQ86TC9 1320 aa12.98□□□□□ -0.33
RFFL-205ENST00000415395 CYP3A7-CYP3A51PA0A087WV96 503 aa12.98□□□□□ -0.33
RFFL-205ENST00000415395 A0A087WWV3 80 aa12.98□□□□□ -0.33
RFFL-205ENST00000415395 SPDYE3A6NKU9 549 aa12.98□□□□□ -0.33
RFFL-205ENST00000415395 EFCAB8A8MWE9 144 aa12.98□□□□□ -0.33
RFFL-205ENST00000415395 USP17L15C9J2P7 530 aa12.98□□□□□ -0.33
RFFL-205ENST00000415395 USP17L13C9JLJ4 530 aa12.98□□□□□ -0.33
RFFL-205ENST00000415395 ADM5C9JUS6 153 aa12.98□□□□□ -0.33
RFFL-205ENST00000415395 USP17L11C9JVI0 530 aa12.98□□□□□ -0.33
RFFL-205ENST00000415395 USP17L18D6R9N7 530 aa12.98□□□□□ -0.33
RFFL-205ENST00000415395 USP17L22D6RA61 530 aa12.98□□□□□ -0.33
RFFL-205ENST00000415395 USP17L17D6RBQ6 530 aa12.98□□□□□ -0.33
RFFL-205ENST00000415395 USP17L19D6RCP7 530 aa12.98□□□□□ -0.33
RFFL-205ENST00000415395 USP17L20D6RJB6 530 aa12.98□□□□□ -0.33
RFFL-205ENST00000415395 POLR2DO15514 142 aaKnown RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms