RNA–Protein interactions for RNA: ENST00000415298.5

AP1S3-205, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 1 (best)

Gene AP1S3, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-205ENST00000415298 ELOA2Q8IYF1 753 aaPredicted RBP22.59■■□□□ 1.21
AP1S3-205ENST00000415298 RMDN2Q96LZ7 410 aa22.59■■□□□ 1.21
AP1S3-205ENST00000415298 XPO4Q9C0E2 1151 aaKnown RBP22.59■■□□□ 1.21
AP1S3-205ENST00000415298 MAGEB6P1A0A0J9YX57 407 aa22.59■■□□□ 1.21
AP1S3-205ENST00000415298 IPO5O00410 1097 aaKnown RBP22.59■■□□□ 1.21
AP1S3-205ENST00000415298 RHOXF2BP0C7M4 288 aa22.59■■□□□ 1.21
AP1S3-205ENST00000415298 STIM1Q13586 685 aa22.59■■□□□ 1.21
AP1S3-205ENST00000415298 RIN2Q8WYP3 895 aaPredicted RBP22.59■■□□□ 1.21
AP1S3-205ENST00000415298 RHOXF2Q9BQY4 288 aa22.59■■□□□ 1.21
AP1S3-205ENST00000415298 ZCWPW1Q9H0M4 648 aa22.59■■□□□ 1.21
AP1S3-205ENST00000415298 VIL1P09327 827 aaKnown RBP22.58■■□□□ 1.21
AP1S3-205ENST00000415298 TUBB2AQ13885 445 aa22.58■■□□□ 1.21
AP1S3-205ENST00000415298 DPY19L2Q6NUT2 758 aa22.58■■□□□ 1.21
AP1S3-205ENST00000415298 CCDC80Q76M96 950 aa22.58■■□□□ 1.21
AP1S3-205ENST00000415298 SDR42E1Q8WUS8 393 aa22.58■■□□□ 1.21
AP1S3-205ENST00000415298 TEKT1Q969V4 418 aa22.58■■□□□ 1.21
AP1S3-205ENST00000415298 TUBB2BQ9BVA1 445 aa22.58■■□□□ 1.21
AP1S3-205ENST00000415298 GGCXP38435 758 aa22.58■■□□□ 1.2
AP1S3-205ENST00000415298 FAM81BQ96LP2 452 aa22.58■■□□□ 1.2
AP1S3-205ENST00000415298 ANO10Q9NW15 660 aa22.58■■□□□ 1.2
AP1S3-205ENST00000415298 CDC23Q9UJX2 597 aa22.58■■□□□ 1.2
AP1S3-205ENST00000415298 RBM8AQ9Y5S9 174 aaKnown RBP22.58■■□□□ 1.2
AP1S3-205ENST00000415298 TAF6LQ9Y6J9 622 aa22.58■■□□□ 1.2
AP1S3-205ENST00000415298 SYNRGQ9UMZ2 1314 aa22.57■■□□□ 1.2
AP1S3-205ENST00000415298 CCDC12Q8WUD4 166 aaPredicted RBP22.57■■□□□ 1.2
AP1S3-205ENST00000415298 STAMBPL1Q96FJ0 436 aa22.57■■□□□ 1.2
AP1S3-205ENST00000415298 LMNB1P20700 586 aa22.57■■□□□ 1.2
AP1S3-205ENST00000415298 PABPC4Q13310 644 aaKnown RBP eCLIP22.57■■□□□ 1.2
AP1S3-205ENST00000415298 RSBN1LQ6PCB5 846 aaPredicted RBP22.57■■□□□ 1.2
AP1S3-205ENST00000415298 CRELD2Q6UXH1 353 aaPredicted RBP22.57■■□□□ 1.2
AP1S3-205ENST00000415298 ZFATQ9P243 1243 aa22.57■■□□□ 1.2
AP1S3-205ENST00000415298 SBF1O95248 1867 aa22.57■■□□□ 1.2
AP1S3-205ENST00000415298 NUGGCQ68CJ6 796 aa22.56■■□□□ 1.2
AP1S3-205ENST00000415298 APLFQ8IW19 511 aaPredicted RBP22.56■■□□□ 1.2
AP1S3-205ENST00000415298 CEP57L1Q8IYX8 460 aa22.56■■□□□ 1.2
AP1S3-205ENST00000415298 AOPEPQ8N6M6 819 aa22.56■■□□□ 1.2
AP1S3-205ENST00000415298 PHF24Q9UPV7 400 aa22.56■■□□□ 1.2
AP1S3-205ENST00000415298 ADAMTSL1Q8N6G6 1762 aa22.56■■□□□ 1.2
AP1S3-205ENST00000415298 FZD9O00144 591 aa22.56■■□□□ 1.2
AP1S3-205ENST00000415298 CTCFP49711 727 aaPredicted RBP22.56■■□□□ 1.2
AP1S3-205ENST00000415298 SKOR1P84550 965 aa22.56■■□□□ 1.2
AP1S3-205ENST00000415298 DYNC1I2Q13409 638 aaKnown RBP22.56■■□□□ 1.2
AP1S3-205ENST00000415298 PPP1R15BQ5SWA1 713 aa22.56■■□□□ 1.2
AP1S3-205ENST00000415298 CIAPIN1Q6FI81 312 aa22.56■■□□□ 1.2
AP1S3-205ENST00000415298 C16orf87Q6PH81 154 aa22.56■■□□□ 1.2
AP1S3-205ENST00000415298 RASEFQ8IZ41 740 aa22.56■■□□□ 1.2
AP1S3-205ENST00000415298 TBC1D31Q96DN5 1066 aa22.56■■□□□ 1.2
AP1S3-205ENST00000415298 DAGLAQ9Y4D2 1042 aa22.56■■□□□ 1.2
AP1S3-205ENST00000415298 SLC4A4Q9Y6R1 1079 aa22.56■■□□□ 1.2
AP1S3-205ENST00000415298 MROH7-TTC4A0A0A0MT08 1334 aa22.56■■□□□ 1.2
AP1S3-205ENST00000415298 ARHGAP6O43182 974 aa22.55■■□□□ 1.2
AP1S3-205ENST00000415298 INHBCP55103 352 aa22.55■■□□□ 1.2
AP1S3-205ENST00000415298 NECTIN1Q15223 517 aa22.55■■□□□ 1.2
AP1S3-205ENST00000415298 HAUS2Q9NVX0 235 aa22.55■■□□□ 1.2
AP1S3-205ENST00000415298 IFNKQ9P0W0 207 aa22.55■■□□□ 1.2
AP1S3-205ENST00000415298 FGAP02671 866 aa22.55■■□□□ 1.2
AP1S3-205ENST00000415298 BTDP43251 543 aa22.55■■□□□ 1.2
AP1S3-205ENST00000415298 IFT88Q13099 833 aa22.55■■□□□ 1.2
AP1S3-205ENST00000415298 ENOX2Q16206 610 aaKnown RBP22.55■■□□□ 1.2
AP1S3-205ENST00000415298 ME3Q16798 604 aa22.55■■□□□ 1.2
AP1S3-205ENST00000415298 COG1Q8WTW3 980 aa22.55■■□□□ 1.2
AP1S3-205ENST00000415298 GMLQ99445 158 aa22.55■■□□□ 1.2
AP1S3-205ENST00000415298 NOD2Q9HC29 1040 aa22.55■■□□□ 1.2
AP1S3-205ENST00000415298 WDR37Q9Y2I8 494 aa22.55■■□□□ 1.2
AP1S3-205ENST00000415298 SUGT1Q9Y2Z0 365 aa22.55■■□□□ 1.2
AP1S3-205ENST00000415298 ZNF541Q9H0D2 1346 aa22.55■■□□□ 1.2
AP1S3-205ENST00000415298 GSG1L2A8MUP6 293 aa22.54■■□□□ 1.2
AP1S3-205ENST00000415298 HSPA4P34932 840 aa22.54■■□□□ 1.2
AP1S3-205ENST00000415298 SH3RF3Q8TEJ3 882 aaPredicted RBP22.54■■□□□ 1.2
AP1S3-205ENST00000415298 KCNN1Q92952 543 aa22.54■■□□□ 1.2
AP1S3-205ENST00000415298 SLC35B4Q969S0 331 aa22.54■■□□□ 1.2
AP1S3-205ENST00000415298 SPATA32Q96LK8 384 aa22.54■■□□□ 1.2
AP1S3-205ENST00000415298 ZWILCHQ9H900 591 aa22.54■■□□□ 1.2
AP1S3-205ENST00000415298 EPB41L4AQ9HCS5 686 aaPredicted RBP22.54■■□□□ 1.2
AP1S3-205ENST00000415298 GJA3Q9Y6H8 435 aa22.54■■□□□ 1.2
AP1S3-205ENST00000415298 PSME4Q14997 1843 aa22.54■■□□□ 1.2
AP1S3-205ENST00000415298 VPS37CA5D8V6 355 aaPredicted RBP22.54■■□□□ 1.2
AP1S3-205ENST00000415298 LUC7L3O95232 432 aaKnown RBP22.54■■□□□ 1.2
AP1S3-205ENST00000415298 ATP6V1G2O95670 118 aa22.54■■□□□ 1.2
AP1S3-205ENST00000415298 GJB2P29033 226 aa22.54■■□□□ 1.2
AP1S3-205ENST00000415298 FKBP1AP62942 108 aaKnown RBP22.54■■□□□ 1.2
AP1S3-205ENST00000415298 GSTO1P78417 241 aa22.54■■□□□ 1.2
AP1S3-205ENST00000415298 ZNF570Q96NI8 536 aa22.54■■□□□ 1.2
AP1S3-205ENST00000415298 ANP32DO95626 131 aa22.53■■□□□ 1.2
AP1S3-205ENST00000415298 XRCC4Q13426 336 aa22.53■■□□□ 1.2
AP1S3-205ENST00000415298 COL9A3Q14050 684 aaPredicted RBP22.53■■□□□ 1.2
AP1S3-205ENST00000415298 NAA35Q5VZE5 725 aa22.53■■□□□ 1.2
AP1S3-205ENST00000415298 DHRS1Q96LJ7 313 aa22.53■■□□□ 1.2
AP1S3-205ENST00000415298 DSCC1Q9BVC3 393 aa22.53■■□□□ 1.2
AP1S3-205ENST00000415298 RNF181Q9P0P0 153 aa22.53■■□□□ 1.2
AP1S3-205ENST00000415298 LIMCH1Q9UPQ0 1083 aa22.53■■□□□ 1.2
AP1S3-205ENST00000415298 GPR75-ASB3A0A0A6YYF3 556 aa22.53■■□□□ 1.2
AP1S3-205ENST00000415298 SMIM22K7EJ46 135 aa22.53■■□□□ 1.2
AP1S3-205ENST00000415298 LDHCP07864 332 aa22.53■■□□□ 1.2
AP1S3-205ENST00000415298 DESP17661 470 aa22.53■■□□□ 1.2
AP1S3-205ENST00000415298 CRKP46108 304 aa22.53■■□□□ 1.2
AP1S3-205ENST00000415298 SESN3P58005 492 aa22.53■■□□□ 1.2
AP1S3-205ENST00000415298 CCDC121Q6ZUS5 278 aa22.53■■□□□ 1.2
AP1S3-205ENST00000415298 MAST2Q6P0Q8 1798 aa22.52■■□□□ 1.2
AP1S3-205ENST00000415298 MKRN4PQ13434 485 aaPredicted RBP22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms