RNA–Protein interactions for RNA: ENST00000414711.5

CPNE1-208, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-208ENST00000414711 ALAS1P13196 640 aa18.85■□□□□ 0.61
CPNE1-208ENST00000414711 CHMP4BP1P59074 171 aa18.85■□□□□ 0.61
CPNE1-208ENST00000414711 ZXDAP98168 799 aa18.85■□□□□ 0.61
CPNE1-208ENST00000414711 DHX38Q92620 1227 aaKnown RBP18.85■□□□□ 0.61
CPNE1-208ENST00000414711 CLIP2Q9UDT6 1046 aa18.85■□□□□ 0.61
CPNE1-208ENST00000414711 NOP58Q9Y2X3 529 aaKnown RBP18.85■□□□□ 0.61
CPNE1-208ENST00000414711 ZBED9Q6R2W3 1325 aa18.84■□□□□ 0.61
CPNE1-208ENST00000414711 RASA1P20936 1047 aa18.84■□□□□ 0.61
CPNE1-208ENST00000414711 ID4P47928 161 aa18.84■□□□□ 0.61
CPNE1-208ENST00000414711 HTRA4P83105 476 aaPredicted RBP18.84■□□□□ 0.61
CPNE1-208ENST00000414711 DLX2Q07687 328 aaPredicted RBP18.84■□□□□ 0.61
CPNE1-208ENST00000414711 RBL2Q08999 1139 aa18.84■□□□□ 0.61
CPNE1-208ENST00000414711 CTC1Q2NKJ3 1217 aa18.84■□□□□ 0.61
CPNE1-208ENST00000414711 AACSQ86V21 672 aa18.84■□□□□ 0.61
CPNE1-208ENST00000414711 PURBQ96QR8 312 aaKnown RBP18.84■□□□□ 0.61
CPNE1-208ENST00000414711 FSD1Q9BTV5 496 aa18.84■□□□□ 0.61
CPNE1-208ENST00000414711 COL4A6Q14031 1691 aa18.84■□□□□ 0.61
CPNE1-208ENST00000414711 MYH4Q9Y623 1939 aa18.84■□□□□ 0.61
CPNE1-208ENST00000414711 PRR23AA6NEV1 266 aa18.83■□□□□ 0.6
CPNE1-208ENST00000414711 A6NJR5 290 aa18.83■□□□□ 0.6
CPNE1-208ENST00000414711 GOLIM4O00461 696 aa18.83■□□□□ 0.6
CPNE1-208ENST00000414711 CKBP12277 381 aa18.83■□□□□ 0.6
CPNE1-208ENST00000414711 PPP2R5BQ15173 497 aa18.83■□□□□ 0.6
CPNE1-208ENST00000414711 MUM1L1Q5H9M0 696 aa18.83■□□□□ 0.6
CPNE1-208ENST00000414711 GDF6Q6KF10 455 aaPredicted RBP18.83■□□□□ 0.6
CPNE1-208ENST00000414711 CTR9Q6PD62 1173 aa18.83■□□□□ 0.6
CPNE1-208ENST00000414711 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.83■□□□□ 0.61e-8■■□□□ 11.7
CPNE1-208ENST00000414711 RPAP2Q8IXW5 612 aaPredicted RBP18.83■□□□□ 0.6
CPNE1-208ENST00000414711 MYOCDQ8IZQ8 938 aa18.83■□□□□ 0.6
CPNE1-208ENST00000414711 LRRC47Q8N1G4 583 aaKnown RBP18.83■□□□□ 0.6
CPNE1-208ENST00000414711 GMCL1P1Q8NEA9 526 aa18.83■□□□□ 0.6
CPNE1-208ENST00000414711 DNAJC2Q99543 621 aaKnown RBP18.83■□□□□ 0.6
CPNE1-208ENST00000414711 ISY1Q9ULR0 285 aaKnown RBP18.83■□□□□ 0.6
CPNE1-208ENST00000414711 MYO7AQ13402 2215 aa18.82■□□□□ 0.6
CPNE1-208ENST00000414711 RBM47A0AV96 593 aaKnown RBP18.82■□□□□ 0.6
CPNE1-208ENST00000414711 H0Y858 1186 aa18.82■□□□□ 0.6
CPNE1-208ENST00000414711 TBX10O75333 385 aa18.82■□□□□ 0.6
CPNE1-208ENST00000414711 AMHP03971 560 aa18.82■□□□□ 0.6
CPNE1-208ENST00000414711 BMP3P12645 472 aa18.82■□□□□ 0.6
CPNE1-208ENST00000414711 STAT2P52630 851 aa18.82■□□□□ 0.6
CPNE1-208ENST00000414711 ATP8B2P98198 1209 aa18.82■□□□□ 0.6
CPNE1-208ENST00000414711 SLFNL1Q499Z3 407 aa18.82■□□□□ 0.6
CPNE1-208ENST00000414711 NSMFQ6X4W1 530 aa18.82■□□□□ 0.6
CPNE1-208ENST00000414711 FBXO11Q86XK2 927 aa18.82■□□□□ 0.6
CPNE1-208ENST00000414711 TLR9Q9NR96 1032 aa18.82■□□□□ 0.6
CPNE1-208ENST00000414711 ARPP21Q9UBL0 812 aaPredicted RBP18.82■□□□□ 0.6
CPNE1-208ENST00000414711 GVINP1Q7Z2Y8 2422 aa18.82■□□□□ 0.6
CPNE1-208ENST00000414711 MICAL3Q7RTP6 2002 aa18.81■□□□□ 0.6
CPNE1-208ENST00000414711 TMEM232C9JQI7 657 aa18.81■□□□□ 0.6
CPNE1-208ENST00000414711 RBAK-RBAKDNI3L0D1 243 aa18.81■□□□□ 0.6
CPNE1-208ENST00000414711 NKRFO15226 690 aaKnown RBP eCLIP18.81■□□□□ 0.6
CPNE1-208ENST00000414711 AVPR2P30518 371 aa18.81■□□□□ 0.6
CPNE1-208ENST00000414711 ALDH5A1P51649 535 aaPredicted RBP18.81■□□□□ 0.6
CPNE1-208ENST00000414711 SIGLEC14Q08ET2 396 aa18.81■□□□□ 0.6
CPNE1-208ENST00000414711 SESTD1Q86VW0 696 aa18.81■□□□□ 0.6
CPNE1-208ENST00000414711 TMEM192Q8IY95 271 aa18.81■□□□□ 0.6
CPNE1-208ENST00000414711 ADD3Q9UEY8 706 aaKnown RBP18.81■□□□□ 0.6
CPNE1-208ENST00000414711 CD207Q9UJ71 328 aa18.81■□□□□ 0.6
CPNE1-208ENST00000414711 SYNPO2Q9UMS6 1093 aa18.81■□□□□ 0.6
CPNE1-208ENST00000414711 TRPC6Q9Y210 931 aa18.81■□□□□ 0.6
CPNE1-208ENST00000414711 SLC4A4Q9Y6R1 1079 aa18.81■□□□□ 0.6
CPNE1-208ENST00000414711 IGKV6D-41A0A0C4DH26 115 aa18.8■□□□□ 0.6
CPNE1-208ENST00000414711 TRIM27P14373 513 aa18.8■□□□□ 0.6
CPNE1-208ENST00000414711 RARSP54136 660 aaKnown RBP18.8■□□□□ 0.6
CPNE1-208ENST00000414711 HYAL1Q12794 435 aa18.8■□□□□ 0.6
CPNE1-208ENST00000414711 IKQ13123 557 aaPredicted RBP18.8■□□□□ 0.6
CPNE1-208ENST00000414711 SLFN13Q68D06 897 aa18.8■□□□□ 0.6
CPNE1-208ENST00000414711 MIER1Q8N108 512 aa18.8■□□□□ 0.6
CPNE1-208ENST00000414711 YME1L1Q96TA2 773 aa18.8■□□□□ 0.6
CPNE1-208ENST00000414711 MKNK2Q9HBH9 465 aa18.8■□□□□ 0.6
CPNE1-208ENST00000414711 ATG2AQ2TAZ0 1938 aa18.8■□□□□ 0.6
CPNE1-208ENST00000414711 EPG5Q9HCE0 2579 aa18.8■□□□□ 0.6
CPNE1-208ENST00000414711 KDM4AO75164 1064 aa18.79■□□□□ 0.6
CPNE1-208ENST00000414711 ADD2P35612 726 aa18.79■□□□□ 0.6
CPNE1-208ENST00000414711 MKRN4PQ13434 485 aaPredicted RBP18.79■□□□□ 0.6
CPNE1-208ENST00000414711 FAM160B2Q86V87 743 aa18.79■□□□□ 0.6
CPNE1-208ENST00000414711 STK11IPQ8N1F8 1099 aa18.79■□□□□ 0.6
CPNE1-208ENST00000414711 COPS5Q92905 334 aa18.79■□□□□ 0.6
CPNE1-208ENST00000414711 MKL1Q969V6 931 aa18.79■□□□□ 0.6
CPNE1-208ENST00000414711 CEP95Q96GE4 821 aa18.79■□□□□ 0.6
CPNE1-208ENST00000414711 TNNQ9UQP3 1299 aa18.79■□□□□ 0.6
CPNE1-208ENST00000414711 NLRC5Q86WI3 1866 aa18.79■□□□□ 0.6
CPNE1-208ENST00000414711 LOC102724159A0A0B4J2E5 919 aa18.78■□□□□ 0.6
CPNE1-208ENST00000414711 LGR5O75473 907 aa18.78■□□□□ 0.6
CPNE1-208ENST00000414711 MBTPS1Q14703 1052 aa18.78■□□□□ 0.6
CPNE1-208ENST00000414711 PWP2Q15269 919 aaKnown RBP18.78■□□□□ 0.6
CPNE1-208ENST00000414711 TRAF7Q6Q0C0 670 aa18.78■□□□□ 0.6
CPNE1-208ENST00000414711 CHURC1Q8WUH1 139 aa18.78■□□□□ 0.6
CPNE1-208ENST00000414711 ASIC4Q96FT7 647 aa18.78■□□□□ 0.6
CPNE1-208ENST00000414711 C1orf115Q9H7X2 142 aa18.78■□□□□ 0.6
CPNE1-208ENST00000414711 LOC730098B7Z3J9 87 aa18.77■□□□□ 0.6
CPNE1-208ENST00000414711 TTLL1O95922 423 aa18.77■□□□□ 0.6
CPNE1-208ENST00000414711 NUBP1P53384 320 aa18.77■□□□□ 0.6
CPNE1-208ENST00000414711 SNAP25P60880 206 aa18.77■□□□□ 0.6
CPNE1-208ENST00000414711 TRMT2AQ8IZ69 625 aaKnown RBP18.77■□□□□ 0.6
CPNE1-208ENST00000414711 SCFD2Q8WU76 684 aa18.77■□□□□ 0.6
CPNE1-208ENST00000414711 STAG1Q8WVM7 1258 aa18.77■□□□□ 0.6
CPNE1-208ENST00000414711 MTMR4Q9NYA4 1195 aa18.77■□□□□ 0.6
CPNE1-208ENST00000414711 CCPG1Q9ULG6 757 aa18.77■□□□□ 0.6
CPNE1-208ENST00000414711 RALGAPA2Q2PPJ7 1873 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms