RNA–Protein interactions for RNA: ENST00000414664.5

CPNE1-207, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,070 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-207ENST00000414664 ALDH8A1Q9H2A2 487 aaPredicted RBP29.16■■■□□ 2.26
CPNE1-207ENST00000414664 PDGFCQ9NRA1 345 aa29.16■■■□□ 2.26
CPNE1-207ENST00000414664 RBM27Q9P2N5 1060 aaKnown RBP29.16■■■□□ 2.26
CPNE1-207ENST00000414664 hCG_1984214I3L0E3 225 aa29.15■■■□□ 2.26
CPNE1-207ENST00000414664 EIF2AK2P19525 551 aaKnown RBP29.15■■■□□ 2.26
CPNE1-207ENST00000414664 ANKRD1Q15327 319 aa29.15■■■□□ 2.26
CPNE1-207ENST00000414664 FCHSD1Q86WN1 690 aa29.15■■■□□ 2.26
CPNE1-207ENST00000414664 ZNF713Q8N859 430 aaPredicted RBP29.15■■■□□ 2.26
CPNE1-207ENST00000414664 SMARCC2Q8TAQ2 1214 aa29.15■■■□□ 2.26
CPNE1-207ENST00000414664 LENG1Q96BZ8 264 aaPredicted RBP29.15■■■□□ 2.26
CPNE1-207ENST00000414664 PSTPIP2Q9H939 334 aa29.15■■■□□ 2.26
CPNE1-207ENST00000414664 SYNRGQ9UMZ2 1314 aa29.15■■■□□ 2.26
CPNE1-207ENST00000414664 LRRC37A2A6NM11 1700 aa29.14■■■□□ 2.26
CPNE1-207ENST00000414664 RBM47A0AV96 593 aaKnown RBP29.14■■■□□ 2.26
CPNE1-207ENST00000414664 ADAMTS4O75173 837 aa29.14■■■□□ 2.26
CPNE1-207ENST00000414664 GJA9P57773 515 aa29.14■■■□□ 2.26
CPNE1-207ENST00000414664 TSEN34Q9BSV6 310 aaKnown RBP29.14■■■□□ 2.26
CPNE1-207ENST00000414664 WDR11Q9BZH6 1224 aa29.14■■■□□ 2.26
CPNE1-207ENST00000414664 SENP6Q9GZR1 1112 aaPredicted RBP29.14■■■□□ 2.26
CPNE1-207ENST00000414664 Q9Y3F1 56 aa29.14■■■□□ 2.26
CPNE1-207ENST00000414664 C11orf97A0A1B0GVM6 126 aaPredicted RBP29.13■■■□□ 2.25
CPNE1-207ENST00000414664 PIK3CDO00329 1044 aa29.13■■■□□ 2.25
CPNE1-207ENST00000414664 NR3C2P08235 984 aa29.13■■■□□ 2.25
CPNE1-207ENST00000414664 C6orf222P0C671 652 aaPredicted RBP29.13■■■□□ 2.25
CPNE1-207ENST00000414664 SMPD1P17405 629 aa29.13■■■□□ 2.25
CPNE1-207ENST00000414664 AKAP17AQ02040 695 aaKnown RBP29.13■■■□□ 2.25
CPNE1-207ENST00000414664 SCFD2Q8WU76 684 aa29.13■■■□□ 2.25
CPNE1-207ENST00000414664 AP5M1Q9H0R1 490 aa29.13■■■□□ 2.25
CPNE1-207ENST00000414664 UPF3AQ9H1J1 476 aaKnown RBP29.13■■■□□ 2.25
CPNE1-207ENST00000414664 GNEQ9Y223 722 aaKnown RBP29.13■■■□□ 2.25
CPNE1-207ENST00000414664 MKI67P46013 3256 aaKnown RBP29.12■■■□□ 2.25
CPNE1-207ENST00000414664 ADCY6O43306 1168 aa29.12■■■□□ 2.25
CPNE1-207ENST00000414664 EIF3JO75822 258 aaKnown RBP29.12■■■□□ 2.25
CPNE1-207ENST00000414664 CCT2P78371 535 aaKnown RBP29.12■■■□□ 2.25
CPNE1-207ENST00000414664 DUSP28Q4G0W2 176 aa29.12■■■□□ 2.25
CPNE1-207ENST00000414664 PPP1R18Q6NYC8 613 aa29.12■■■□□ 2.25
CPNE1-207ENST00000414664 TEX2Q8IWB9 1127 aa29.12■■■□□ 2.25
CPNE1-207ENST00000414664 PCSK9Q8NBP7 692 aaKnown RBP29.12■■■□□ 2.25
CPNE1-207ENST00000414664 KLHDC9Q8NEP7 349 aa29.12■■■□□ 2.25
CPNE1-207ENST00000414664 GPKOWQ92917 476 aaPredicted RBP eCLIP29.12■■■□□ 2.25
CPNE1-207ENST00000414664 PDCD2LQ9BRP1 358 aa29.12■■■□□ 2.25
CPNE1-207ENST00000414664 TNRC18O15417 2968 aaPredicted RBP29.12■■■□□ 2.25
CPNE1-207ENST00000414664 EVI5O60447 810 aa29.11■■■□□ 2.25
CPNE1-207ENST00000414664 CST5P28325 142 aaPredicted RBP29.11■■■□□ 2.25
CPNE1-207ENST00000414664 NAPAP54920 295 aa29.11■■■□□ 2.25
CPNE1-207ENST00000414664 WWC2Q6AWC2 1192 aa29.11■■■□□ 2.25
CPNE1-207ENST00000414664 PHF24Q9UPV7 400 aa29.11■■■□□ 2.25
CPNE1-207ENST00000414664 GTF3C3Q9Y5Q9 886 aa29.11■■■□□ 2.25
CPNE1-207ENST00000414664 NR2E3Q9Y5X4 410 aa29.11■■■□□ 2.25
CPNE1-207ENST00000414664 MOXD2PA6NHM9 499 aa29.1■■■□□ 2.25
CPNE1-207ENST00000414664 MEIS2O14770 477 aa29.1■■■□□ 2.25
CPNE1-207ENST00000414664 NKRFO15226 690 aaKnown RBP eCLIP29.1■■■□□ 2.25
CPNE1-207ENST00000414664 PRPF3O43395 683 aaKnown RBP29.1■■■□□ 2.25
CPNE1-207ENST00000414664 IFNAR1P17181 557 aa29.1■■■□□ 2.25
CPNE1-207ENST00000414664 NKX3-2P78367 333 aa29.1■■■□□ 2.25
CPNE1-207ENST00000414664 TTLL4Q14679 1199 aa29.1■■■□□ 2.25
CPNE1-207ENST00000414664 PGM5Q15124 567 aa29.1■■■□□ 2.25
CPNE1-207ENST00000414664 PFKFB3Q16875 520 aaPredicted RBP29.1■■■□□ 2.25
CPNE1-207ENST00000414664 GNASQ5JWF2 1037 aa29.1■■■□□ 2.25
CPNE1-207ENST00000414664 CPLX2Q6PUV4 134 aaKnown RBP29.1■■■□□ 2.25
CPNE1-207ENST00000414664 USP17L6PQ6QN14 398 aa29.1■■■□□ 2.25
CPNE1-207ENST00000414664 TLK2Q86UE8 772 aa29.1■■■□□ 2.25
CPNE1-207ENST00000414664 LARP6Q9BRS8 491 aaKnown RBP29.1■■■□□ 2.25
CPNE1-207ENST00000414664 BARHL2Q9NY43 387 aa29.1■■■□□ 2.25
CPNE1-207ENST00000414664 PDE4DIPQ5VU43 2346 aa29.09■■■□□ 2.25
CPNE1-207ENST00000414664 CPLX1O14810 134 aa29.09■■■□□ 2.25
CPNE1-207ENST00000414664 DYNC1LI2O43237 492 aaPredicted RBP29.09■■■□□ 2.25
CPNE1-207ENST00000414664 MYCLP12524 364 aaPredicted RBP29.09■■■□□ 2.25
CPNE1-207ENST00000414664 VSIG10LQ86VR7 867 aa29.09■■■□□ 2.25
CPNE1-207ENST00000414664 RNF26Q9BY78 433 aaPredicted RBP29.09■■■□□ 2.25
CPNE1-207ENST00000414664 GLT8D2Q9H1C3 349 aa29.09■■■□□ 2.25
CPNE1-207ENST00000414664 NCOA5Q9HCD5 579 aaKnown RBP29.09■■■□□ 2.25
CPNE1-207ENST00000414664 TXNP10599 105 aaKnown RBP29.08■■■□□ 2.25
CPNE1-207ENST00000414664 SCG2P13521 617 aa29.08■■■□□ 2.25
CPNE1-207ENST00000414664 CCND2P30279 289 aa29.08■■■□□ 2.25
CPNE1-207ENST00000414664 NTRK3Q16288 839 aa29.08■■■□□ 2.25
CPNE1-207ENST00000414664 KCNA10Q16322 511 aa29.08■■■□□ 2.25
CPNE1-207ENST00000414664 SEPT14Q6ZU15 432 aa29.08■■■□□ 2.25
CPNE1-207ENST00000414664 STXBP3O00186 592 aa29.07■■■□□ 2.24
CPNE1-207ENST00000414664 ZEB2O60315 1214 aa29.07■■■□□ 2.24
CPNE1-207ENST00000414664 NEK4P51957 841 aa29.07■■■□□ 2.24
CPNE1-207ENST00000414664 ACLYP53396 1101 aa29.07■■■□□ 2.24
CPNE1-207ENST00000414664 AK2P54819 239 aa29.07■■■□□ 2.24
CPNE1-207ENST00000414664 STK3Q13188 491 aa29.07■■■□□ 2.24
CPNE1-207ENST00000414664 CCSAPQ6IQ19 270 aaPredicted RBP29.07■■■□□ 2.24
CPNE1-207ENST00000414664 TRIM22Q8IYM9 498 aa29.07■■■□□ 2.24
CPNE1-207ENST00000414664 CCDC12Q8WUD4 166 aaPredicted RBP29.07■■■□□ 2.24
CPNE1-207ENST00000414664 PHKBQ93100 1093 aa29.07■■■□□ 2.24
CPNE1-207ENST00000414664 FERMT2Q96AC1 680 aa29.07■■■□□ 2.24
CPNE1-207ENST00000414664 SLC26A6Q9BXS9 759 aa29.07■■■□□ 2.24
CPNE1-207ENST00000414664 UPF2Q9HAU5 1272 aaKnown RBP29.07■■■□□ 2.24
CPNE1-207ENST00000414664 FRMPD4Q14CM0 1322 aa29.06■■■□□ 2.24
CPNE1-207ENST00000414664 ADCY7P51828 1080 aa29.06■■■□□ 2.24
CPNE1-207ENST00000414664 C22orf23Q9BZE7 217 aa29.06■■■□□ 2.24
CPNE1-207ENST00000414664 SLKQ9H2G2 1235 aaPredicted RBP29.06■■■□□ 2.24
CPNE1-207ENST00000414664 RIC8AQ9NPQ8 531 aa29.06■■■□□ 2.24
CPNE1-207ENST00000414664 MYADML2A6NDP7 307 aa29.05■■■□□ 2.24
CPNE1-207ENST00000414664 SMCO2A6NFE2 343 aa29.05■■■□□ 2.24
CPNE1-207ENST00000414664 SPDYE3A6NKU9 549 aa29.05■■■□□ 2.24
CPNE1-207ENST00000414664 STAM2O75886 525 aa29.05■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms