RNA–Protein interactions for RNA: ENST00000414008.3

HCG27-202, Transcript of HLA complex group 27, humanhuman

TSL 4

Gene HCG27, Length 829 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG27-202ENST00000414008 R3HDMLQ9H3Y0 253 aa11.38□□□□□ -0.59
HCG27-202ENST00000414008 RUBCNLQ9H714 662 aa11.38□□□□□ -0.59
HCG27-202ENST00000414008 KANSL2Q9H9L4 492 aa11.38□□□□□ -0.59
HCG27-202ENST00000414008 PRDM10Q9NQV6 1147 aa11.38□□□□□ -0.59
HCG27-202ENST00000414008 ZDHHC3Q9NYG2 299 aa11.38□□□□□ -0.59
HCG27-202ENST00000414008 CTNNA3Q9UI47 895 aa11.38□□□□□ -0.59
HCG27-202ENST00000414008 ZNF232Q9UNY5 417 aa11.38□□□□□ -0.59
HCG27-202ENST00000414008 AGTPBP1Q9UPW5 1226 aa11.38□□□□□ -0.59
HCG27-202ENST00000414008 GPR25O00155 361 aa11.37□□□□□ -0.59
HCG27-202ENST00000414008 NOS2P35228 1153 aa11.37□□□□□ -0.59
HCG27-202ENST00000414008 USP14P54578 494 aa11.37□□□□□ -0.59
HCG27-202ENST00000414008 HAND2P61296 217 aa11.37□□□□□ -0.59
HCG27-202ENST00000414008 ICA1Q05084 483 aa11.37□□□□□ -0.59
HCG27-202ENST00000414008 DGKZQ13574 1117 aa11.37□□□□□ -0.59
HCG27-202ENST00000414008 TEAD4Q15561 434 aa11.37□□□□□ -0.59
HCG27-202ENST00000414008 NOM1Q5C9Z4 860 aaKnown RBP11.37□□□□□ -0.59
HCG27-202ENST00000414008 KIAA1211Q6ZU35 1233 aa11.37□□□□□ -0.59
HCG27-202ENST00000414008 SIAH1Q8IUQ4 282 aa11.37□□□□□ -0.59
HCG27-202ENST00000414008 CNTNAP3BQ96NU0 1288 aa11.37□□□□□ -0.59
HCG27-202ENST00000414008 HINFPQ9BQA5 517 aa11.37□□□□□ -0.59
HCG27-202ENST00000414008 CNTNAP3Q9BZ76 1288 aa11.37□□□□□ -0.59
HCG27-202ENST00000414008 TSPAN10Q9H1Z9 355 aaPredicted RBP11.37□□□□□ -0.59
HCG27-202ENST00000414008 CRISPLD1Q9H336 500 aa11.37□□□□□ -0.59
HCG27-202ENST00000414008 INCENPQ9NQS7 918 aa11.37□□□□□ -0.59
HCG27-202ENST00000414008 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.37□□□□□ -0.59
HCG27-202ENST00000414008 SLC45A1Q9Y2W3 748 aa11.37□□□□□ -0.59
HCG27-202ENST00000414008 A0A1W2PRG0 241 aa11.36□□□□□ -0.59
HCG27-202ENST00000414008 ORC4O43929 436 aa11.36□□□□□ -0.59
HCG27-202ENST00000414008 CDC45O75419 566 aa11.36□□□□□ -0.59
HCG27-202ENST00000414008 FGRP09769 529 aa11.36□□□□□ -0.59
HCG27-202ENST00000414008 TSPY3P0CV98 308 aa11.36□□□□□ -0.59
HCG27-202ENST00000414008 TSPY8P0CW00 308 aa11.36□□□□□ -0.59
HCG27-202ENST00000414008 PCP11498 1178 aaKnown RBP11.36□□□□□ -0.59
HCG27-202ENST00000414008 PSMA6P60900 246 aaKnown RBP11.36□□□□□ -0.59
HCG27-202ENST00000414008 TFAP4Q01664 338 aa11.36□□□□□ -0.59
HCG27-202ENST00000414008 ATP2B2Q01814 1243 aa11.36□□□□□ -0.59
HCG27-202ENST00000414008 PTH1RQ03431 593 aa11.36□□□□□ -0.59
HCG27-202ENST00000414008 PABPC4Q13310 644 aaKnown RBP eCLIP11.36□□□□□ -0.59
HCG27-202ENST00000414008 ZYXQ15942 572 aaKnown RBP11.36□□□□□ -0.59
HCG27-202ENST00000414008 IMMTQ16891 758 aaKnown RBP11.36□□□□□ -0.59
HCG27-202ENST00000414008 FAM47AQ5JRC9 791 aa11.36□□□□□ -0.59
HCG27-202ENST00000414008 TBCELQ5QJ74 424 aa11.36□□□□□ -0.59
HCG27-202ENST00000414008 AKNAD1Q5T1N1 836 aa11.36□□□□□ -0.59
HCG27-202ENST00000414008 TREML2Q5T2D2 321 aa11.36□□□□□ -0.59
HCG27-202ENST00000414008 CASC1Q6TDU7 716 aa11.36□□□□□ -0.59
HCG27-202ENST00000414008 MFSD6Q6ZSS7 791 aa11.36□□□□□ -0.59
HCG27-202ENST00000414008 CLEC10AQ8IUN9 316 aa11.36□□□□□ -0.59
HCG27-202ENST00000414008 NEDD1Q8NHV4 660 aa11.36□□□□□ -0.59
HCG27-202ENST00000414008 PARK7Q99497 189 aaKnown RBP11.36□□□□□ -0.59
HCG27-202ENST00000414008 RNF41Q9H4P4 317 aaPredicted RBP11.36□□□□□ -0.59
HCG27-202ENST00000414008 SH2D4AQ9H788 454 aa11.36□□□□□ -0.59
HCG27-202ENST00000414008 TOMM22Q9NS69 142 aa11.36□□□□□ -0.59
HCG27-202ENST00000414008 TMX2Q9Y320 296 aa11.36□□□□□ -0.59
HCG27-202ENST00000414008 TACC3Q9Y6A5 838 aa11.36□□□□□ -0.59
HCG27-202ENST00000414008 SERTM1A2A2V5 107 aa11.35□□□□□ -0.59
HCG27-202ENST00000414008 TSPY2A6NKD2 308 aa11.35□□□□□ -0.59
HCG27-202ENST00000414008 RANBP6O60518 1105 aaKnown RBP11.35□□□□□ -0.59
HCG27-202ENST00000414008 TLR2O60603 784 aa11.35□□□□□ -0.59
HCG27-202ENST00000414008 CYP2C8P10632 490 aa11.35□□□□□ -0.59
HCG27-202ENST00000414008 EEF2P13639 858 aaKnown RBP11.35□□□□□ -0.59
HCG27-202ENST00000414008 HOXA7P31268 230 aaPredicted RBP11.35□□□□□ -0.59
HCG27-202ENST00000414008 ARSJQ5FYB0 599 aaPredicted RBP11.35□□□□□ -0.59
HCG27-202ENST00000414008 RRP12Q5JTH9 1297 aaKnown RBP11.35□□□□□ -0.59
HCG27-202ENST00000414008 FAM200AQ8TCP9 573 aa11.35□□□□□ -0.59
HCG27-202ENST00000414008 ZNF296Q8WUU4 475 aaPredicted RBP11.35□□□□□ -0.59
HCG27-202ENST00000414008 STAG1Q8WVM7 1258 aa11.35□□□□□ -0.59
HCG27-202ENST00000414008 C12orf42Q96LP6 360 aa11.35□□□□□ -0.59
HCG27-202ENST00000414008 PHIPQ8WWQ0 1821 aa11.35□□□□□ -0.59
HCG27-202ENST00000414008 ATAD5Q96QE3 1844 aa11.35□□□□□ -0.59
HCG27-202ENST00000414008 LAMB1P07942 1786 aa11.34□□□□□ -0.59
HCG27-202ENST00000414008 IGKV6D-41A0A0C4DH26 115 aa11.34□□□□□ -0.59
HCG27-202ENST00000414008 FKTNO75072 461 aa11.34□□□□□ -0.59
HCG27-202ENST00000414008 ATP4AP20648 1035 aa11.34□□□□□ -0.59
HCG27-202ENST00000414008 TBC1D10CQ8IV04 446 aa11.34□□□□□ -0.59
HCG27-202ENST00000414008 SMCR8Q8TEV9 937 aaPredicted RBP11.34□□□□□ -0.59
HCG27-202ENST00000414008 MAP4K1Q92918 833 aa11.34□□□□□ -0.59
HCG27-202ENST00000414008 CEP95Q96GE4 821 aa11.34□□□□□ -0.59
HCG27-202ENST00000414008 ASCC2Q9H1I8 757 aaPredicted RBP11.34□□□□□ -0.59
HCG27-202ENST00000414008 MTMR4Q9NYA4 1195 aa11.34□□□□□ -0.59
HCG27-202ENST00000414008 NYAP2Q9P242 653 aa11.34□□□□□ -0.59
HCG27-202ENST00000414008 CLIP2Q9UDT6 1046 aa11.34□□□□□ -0.59
HCG27-202ENST00000414008 PHF24Q9UPV7 400 aa11.34□□□□□ -0.59
HCG27-202ENST00000414008 TTLL1O95922 423 aa11.33□□□□□ -0.6
HCG27-202ENST00000414008 VCAM1P19320 739 aa11.33□□□□□ -0.6
HCG27-202ENST00000414008 NT5C2P49902 561 aa11.33□□□□□ -0.6
HCG27-202ENST00000414008 IRX3P78415 501 aaPredicted RBP11.33□□□□□ -0.6
HCG27-202ENST00000414008 KRT76Q01546 638 aa11.33□□□□□ -0.6
HCG27-202ENST00000414008 SP3Q02447 781 aa11.33□□□□□ -0.6
HCG27-202ENST00000414008 RNFT1Q5M7Z0 435 aa11.33□□□□□ -0.6
HCG27-202ENST00000414008 FIGNL1Q6PIW4 674 aa11.33□□□□□ -0.6
HCG27-202ENST00000414008 C17orf99Q6UX52 265 aa11.33□□□□□ -0.6
HCG27-202ENST00000414008 ZSCAN1Q8NBB4 408 aa11.33□□□□□ -0.6
HCG27-202ENST00000414008 ZDHHC1Q8WTX9 485 aa11.33□□□□□ -0.6
HCG27-202ENST00000414008 LPAR1Q92633 364 aa11.33□□□□□ -0.6
HCG27-202ENST00000414008 ESR2Q92731 530 aa11.33□□□□□ -0.6
HCG27-202ENST00000414008 LSG1Q9H089 658 aaKnown RBP11.33□□□□□ -0.6
HCG27-202ENST00000414008 VCPKMTQ9H867 229 aa11.33□□□□□ -0.6
HCG27-202ENST00000414008 CPA4Q9UI42 421 aa11.33□□□□□ -0.6
HCG27-202ENST00000414008 PLIN4Q96Q06 1357 aa11.32□□□□□ -0.6
HCG27-202ENST00000414008 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 107.8 ms