RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 SF3B3Q15393 1217 aaKnown RBP19.56■□□□□ 0.72
SDCBP-202ENST00000413219 NFRKBQ6P4R8 1299 aa19.56■□□□□ 0.72
SDCBP-202ENST00000413219 FOXR2Q6PJQ5 311 aa19.56■□□□□ 0.72
SDCBP-202ENST00000413219 MICALL1Q8N3F8 863 aa19.56■□□□□ 0.72
SDCBP-202ENST00000413219 MYH1P12882 1939 aa19.56■□□□□ 0.72
SDCBP-202ENST00000413219 SSU72P8A0A1W2PR75 194 aa19.55■□□□□ 0.72
SDCBP-202ENST00000413219 ERLIN2O94905 339 aa19.55■□□□□ 0.72
SDCBP-202ENST00000413219 MAGEA1P43355 309 aa19.55■□□□□ 0.72
SDCBP-202ENST00000413219 CRKLP46109 303 aaKnown RBP19.55■□□□□ 0.72
SDCBP-202ENST00000413219 TFAP4Q01664 338 aa19.55■□□□□ 0.72
SDCBP-202ENST00000413219 C8orf74Q6P047 294 aa19.55■□□□□ 0.72
SDCBP-202ENST00000413219 SPATS2Q86XZ4 545 aaKnown RBP19.55■□□□□ 0.72
SDCBP-202ENST00000413219 KIAA0895Q8NCT3 520 aa19.55■□□□□ 0.72
SDCBP-202ENST00000413219 MAST2Q6P0Q8 1798 aa19.55■□□□□ 0.72
SDCBP-202ENST00000413219 PVALEFA0A1B0GWK0 134 aa19.55■□□□□ 0.72
SDCBP-202ENST00000413219 HEATR3Q7Z4Q2 680 aa19.55■□□□□ 0.72
SDCBP-202ENST00000413219 TSEN2Q8NCE0 465 aaKnown RBP19.55■□□□□ 0.72
SDCBP-202ENST00000413219 EEF2KMTQ96G04 330 aa19.55■□□□□ 0.72
SDCBP-202ENST00000413219 ZMYND12Q9H0C1 365 aa19.55■□□□□ 0.72
SDCBP-202ENST00000413219 IL17RBQ9NRM6 502 aa19.55■□□□□ 0.72
SDCBP-202ENST00000413219 MINPP1Q9UNW1 487 aa19.55■□□□□ 0.72
SDCBP-202ENST00000413219 ZEB2O60315 1214 aa19.54■□□□□ 0.72
SDCBP-202ENST00000413219 ASTE1Q2TB18 679 aaPredicted RBP19.54■□□□□ 0.72
SDCBP-202ENST00000413219 TTMPQ5BVD1 217 aa19.54■□□□□ 0.72
SDCBP-202ENST00000413219 EMC10Q5UCC4 262 aa19.54■□□□□ 0.72
SDCBP-202ENST00000413219 B4GALNT4Q76KP1 1039 aa19.54■□□□□ 0.72
SDCBP-202ENST00000413219 IFT20Q8IY31 132 aa19.54■□□□□ 0.72
SDCBP-202ENST00000413219 NOX5Q96PH1 765 aa19.54■□□□□ 0.72
SDCBP-202ENST00000413219 TLR10Q9BXR5 811 aa19.54■□□□□ 0.72
SDCBP-202ENST00000413219 EPHB6O15197 1021 aa19.53■□□□□ 0.72
SDCBP-202ENST00000413219 SLC7A5Q01650 507 aa19.53■□□□□ 0.72
SDCBP-202ENST00000413219 LRRC63Q05C16 580 aa19.53■□□□□ 0.72
SDCBP-202ENST00000413219 NONOQ15233 471 aaKnown RBP eCLIP19.53■□□□□ 0.72
SDCBP-202ENST00000413219 SLC35G1Q2M3R5 365 aa19.53■□□□□ 0.72
SDCBP-202ENST00000413219 CFAP221Q4G0U5 840 aa19.53■□□□□ 0.72
SDCBP-202ENST00000413219 GUF1Q8N442 669 aaKnown RBP19.53■□□□□ 0.72
SDCBP-202ENST00000413219 MREGQ8N565 214 aa19.53■□□□□ 0.72
SDCBP-202ENST00000413219 BAP1Q92560 729 aa19.53■□□□□ 0.72
SDCBP-202ENST00000413219 CALML4Q96GE6 196 aa19.53■□□□□ 0.72
SDCBP-202ENST00000413219 DRC1Q96MC2 740 aa19.53■□□□□ 0.72
SDCBP-202ENST00000413219 GDF3Q9NR23 364 aa19.53■□□□□ 0.72
SDCBP-202ENST00000413219 FAM207AQ9NSI2 230 aaPredicted RBP19.53■□□□□ 0.72
SDCBP-202ENST00000413219 STK17AQ9UEE5 414 aa19.53■□□□□ 0.72
SDCBP-202ENST00000413219 ROBO3Q96MS0 1386 aa19.53■□□□□ 0.72
SDCBP-202ENST00000413219 RBAK-RBAKDNI3L0D1 243 aa19.53■□□□□ 0.72
SDCBP-202ENST00000413219 CYTH3O43739 400 aa19.53■□□□□ 0.72
SDCBP-202ENST00000413219 C12orf60Q5U649 245 aa19.53■□□□□ 0.72
SDCBP-202ENST00000413219 PDXDC1Q6P996 788 aa19.53■□□□□ 0.72
SDCBP-202ENST00000413219 UNC13DQ70J99 1090 aa19.53■□□□□ 0.72
SDCBP-202ENST00000413219 C1orf131Q8NDD1 294 aaKnown RBP19.53■□□□□ 0.72
SDCBP-202ENST00000413219 ARL8AQ96BM9 186 aa19.53■□□□□ 0.72
SDCBP-202ENST00000413219 NUCKS1Q9H1E3 243 aaKnown RBP19.53■□□□□ 0.72
SDCBP-202ENST00000413219 MMRN2Q9H8L6 949 aa19.53■□□□□ 0.72
SDCBP-202ENST00000413219 ZNF652Q9Y2D9 606 aa19.53■□□□□ 0.72
SDCBP-202ENST00000413219 PALM3A6NDB9 673 aaPredicted RBP19.52■□□□□ 0.72
SDCBP-202ENST00000413219 WTIPA6NIX2 430 aaPredicted RBP19.52■□□□□ 0.72
SDCBP-202ENST00000413219 LRRC53A6NM62 1247 aa19.52■□□□□ 0.72
SDCBP-202ENST00000413219 KLHDC7AQ5VTJ3 777 aa19.52■□□□□ 0.72
SDCBP-202ENST00000413219 SV2BQ7L1I2 683 aa19.52■□□□□ 0.72
SDCBP-202ENST00000413219 RRAGAQ7L523 313 aa19.52■□□□□ 0.72
SDCBP-202ENST00000413219 CD302Q8IX05 232 aa19.52■□□□□ 0.72
SDCBP-202ENST00000413219 MMTAG2Q9BU76 263 aaKnown RBP19.52■□□□□ 0.72
SDCBP-202ENST00000413219 RBM12Q9NTZ6 932 aaKnown RBP19.52■□□□□ 0.72
SDCBP-202ENST00000413219 MCM9Q9NXL9 1143 aa19.52■□□□□ 0.72
SDCBP-202ENST00000413219 BTG4Q9NY30 223 aa19.52■□□□□ 0.72
SDCBP-202ENST00000413219 SLAIN2Q9P270 581 aa19.52■□□□□ 0.72
SDCBP-202ENST00000413219 NKRFO15226 690 aaKnown RBP eCLIP19.52■□□□□ 0.713e-7■■■■□ 24.1
SDCBP-202ENST00000413219 MATR3P43243 847 aaKnown RBP eCLIP19.52■□□□□ 0.71
SDCBP-202ENST00000413219 PAK2Q13177 524 aa19.52■□□□□ 0.71
SDCBP-202ENST00000413219 SWT1Q5T5J6 900 aaKnown RBP19.52■□□□□ 0.71
SDCBP-202ENST00000413219 SYN2Q92777 582 aaPredicted RBP19.52■□□□□ 0.71
SDCBP-202ENST00000413219 ZIM3Q96PE6 472 aa19.52■□□□□ 0.71
SDCBP-202ENST00000413219 SPZ1Q9BXG8 430 aa19.52■□□□□ 0.71
SDCBP-202ENST00000413219 EHD4Q9H223 541 aa19.52■□□□□ 0.71
SDCBP-202ENST00000413219 GRID2IPA4D2P6 1211 aa19.51■□□□□ 0.71
SDCBP-202ENST00000413219 CCNT1O60563 726 aaKnown RBP19.51■□□□□ 0.71
SDCBP-202ENST00000413219 KDM7AQ6ZMT4 941 aa19.51■□□□□ 0.71
SDCBP-202ENST00000413219 NEK8Q86SG6 692 aa19.51■□□□□ 0.71
SDCBP-202ENST00000413219 IQCKQ8N0W5 287 aa19.51■□□□□ 0.71
SDCBP-202ENST00000413219 CEP89Q96ST8 783 aa19.51■□□□□ 0.71
SDCBP-202ENST00000413219 PAGR1Q9BTK6 254 aa19.51■□□□□ 0.71
SDCBP-202ENST00000413219 SLC39A2Q9NP94 309 aa19.51■□□□□ 0.71
SDCBP-202ENST00000413219 LUC7LQ9NQ29 371 aaKnown RBP19.51■□□□□ 0.71
SDCBP-202ENST00000413219 GNA11P29992 359 aa19.5■□□□□ 0.71
SDCBP-202ENST00000413219 INPP5BP32019 993 aa19.5■□□□□ 0.71
SDCBP-202ENST00000413219 CXCR5P32302 372 aa19.5■□□□□ 0.71
SDCBP-202ENST00000413219 LIG3P49916 1009 aa19.5■□□□□ 0.71
SDCBP-202ENST00000413219 SKIDA1Q1XH10 827 aa19.5■□□□□ 0.71
SDCBP-202ENST00000413219 LETM2Q2VYF4 491 aa19.5■□□□□ 0.71
SDCBP-202ENST00000413219 MTMR8Q96EF0 704 aa19.5■□□□□ 0.71
SDCBP-202ENST00000413219 HINFPQ9BQA5 517 aa19.5■□□□□ 0.71
SDCBP-202ENST00000413219 C6orf50Q9HD87 102 aa19.5■□□□□ 0.71
SDCBP-202ENST00000413219 SALL4Q9UJQ4 1053 aa19.5■□□□□ 0.71
SDCBP-202ENST00000413219 USP17L8P0C7I0 530 aa19.5■□□□□ 0.71
SDCBP-202ENST00000413219 CFAP58Q5T655 872 aa19.5■□□□□ 0.71
SDCBP-202ENST00000413219 MCTP2Q6DN12 878 aa19.5■□□□□ 0.71
SDCBP-202ENST00000413219 PLCD3Q8N3E9 789 aa19.5■□□□□ 0.71
SDCBP-202ENST00000413219 RIC8AQ9NPQ8 531 aa19.5■□□□□ 0.71
SDCBP-202ENST00000413219 SRRM3A6NNA2 597 aaPredicted RBP19.49■□□□□ 0.71
SDCBP-202ENST00000413219 NCK2O43639 380 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms