RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 IARSP41252 1262 aaKnown RBP6.7□□□□□ -1.34
LINC00342-201ENST00000412393 AAMPQ13685 434 aa6.7□□□□□ -1.34
LINC00342-201ENST00000412393 SPRED3Q2MJR0 410 aa6.7□□□□□ -1.34
LINC00342-201ENST00000412393 RPS26P11Q5JNZ5 115 aaPredicted RBP6.7□□□□□ -1.34
LINC00342-201ENST00000412393 KIAA0319Q5VV43 1072 aa6.7□□□□□ -1.34
LINC00342-201ENST00000412393 CCDC30Q5VVM6 783 aa6.7□□□□□ -1.34
LINC00342-201ENST00000412393 GJD3Q8N144 294 aa6.7□□□□□ -1.34
LINC00342-201ENST00000412393 SMC1BQ8NDV3 1235 aa6.7□□□□□ -1.34
LINC00342-201ENST00000412393 ZNF428Q96B54 188 aa6.7□□□□□ -1.34
LINC00342-201ENST00000412393 PSMD1Q99460 953 aa6.7□□□□□ -1.34
LINC00342-201ENST00000412393 ISCA1Q9BUE6 129 aa6.7□□□□□ -1.34
LINC00342-201ENST00000412393 TMX4Q9H1E5 349 aaPredicted RBP6.7□□□□□ -1.34
LINC00342-201ENST00000412393 PHAXQ9H814 394 aaKnown RBP6.7□□□□□ -1.34
LINC00342-201ENST00000412393 GTF2IRD1Q9UHL9 959 aa6.7□□□□□ -1.34
LINC00342-201ENST00000412393 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.69□□□□□ -1.34
LINC00342-201ENST00000412393 IGF2BP3O00425 579 aaKnown RBP eCLIP6.69□□□□□ -1.34
LINC00342-201ENST00000412393 BBOX1O75936 387 aa6.69□□□□□ -1.34
LINC00342-201ENST00000412393 ZP2Q05996 745 aa6.69□□□□□ -1.34
LINC00342-201ENST00000412393 IKZF1Q13422 519 aa6.69□□□□□ -1.34
LINC00342-201ENST00000412393 KIF4BQ2VIQ3 1234 aa6.69□□□□□ -1.34
LINC00342-201ENST00000412393 DDX46Q7L014 1031 aaKnown RBP6.69□□□□□ -1.34
LINC00342-201ENST00000412393 TSPYL6Q8N831 410 aa6.69□□□□□ -1.34
LINC00342-201ENST00000412393 FBXO15Q8NCQ5 510 aaPredicted RBP6.69□□□□□ -1.34
LINC00342-201ENST00000412393 JDP2Q8WYK2 163 aa6.69□□□□□ -1.34
LINC00342-201ENST00000412393 TSR2Q969E8 191 aaKnown RBP6.69□□□□□ -1.34
LINC00342-201ENST00000412393 FAM89AQ96GI7 184 aa6.69□□□□□ -1.34
LINC00342-201ENST00000412393 LIN37Q96GY3 246 aaPredicted RBP6.69□□□□□ -1.34
LINC00342-201ENST00000412393 NOP58Q9Y2X3 529 aaKnown RBP6.69□□□□□ -1.34
LINC00342-201ENST00000412393 ATP6V0A2Q9Y487 856 aa6.69□□□□□ -1.34
LINC00342-201ENST00000412393 LRRC37AA6NMS7 1700 aa6.69□□□□□ -1.34
LINC00342-201ENST00000412393 ABCC4O15439 1325 aa6.69□□□□□ -1.34
LINC00342-201ENST00000412393 IL16Q14005 1332 aa6.69□□□□□ -1.34
LINC00342-201ENST00000412393 ZNF541Q9H0D2 1346 aa6.69□□□□□ -1.34
LINC00342-201ENST00000412393 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.68□□□□□ -1.34
LINC00342-201ENST00000412393 IQCA1LA6NCM1 817 aa6.68□□□□□ -1.34
LINC00342-201ENST00000412393 FZD9O00144 591 aa6.68□□□□□ -1.34
LINC00342-201ENST00000412393 DDX58O95786 925 aaKnown RBP6.68□□□□□ -1.34
LINC00342-201ENST00000412393 GRAPQ13588 217 aa6.68□□□□□ -1.34
LINC00342-201ENST00000412393 MPZL3Q6UWV2 235 aa6.68□□□□□ -1.34
LINC00342-201ENST00000412393 SP8Q8IXZ3 490 aa6.68□□□□□ -1.34
LINC00342-201ENST00000412393 FAM9BQ8IZU0 186 aa6.68□□□□□ -1.34
LINC00342-201ENST00000412393 GRAPLQ8TC17 118 aaPredicted RBP6.68□□□□□ -1.34
LINC00342-201ENST00000412393 GTF3C2Q8WUA4 911 aaPredicted RBP6.68□□□□□ -1.34
LINC00342-201ENST00000412393 MYD88Q99836 296 aa6.68□□□□□ -1.34
LINC00342-201ENST00000412393 STK31Q9BXU1 1019 aa6.68□□□□□ -1.34
LINC00342-201ENST00000412393 DISC1Q9NRI5 854 aa6.68□□□□□ -1.34
LINC00342-201ENST00000412393 SPEF2Q9C093 1822 aa6.68□□□□□ -1.34
LINC00342-201ENST00000412393 COL4A5P29400 1685 aa6.68□□□□□ -1.34
LINC00342-201ENST00000412393 IRS4O14654 1257 aaPredicted RBP6.67□□□□□ -1.34
LINC00342-201ENST00000412393 PPIP5K2O43314 1243 aa6.67□□□□□ -1.34
LINC00342-201ENST00000412393 HSP90B1P14625 803 aaKnown RBP6.67□□□□□ -1.34
LINC00342-201ENST00000412393 BUD31P41223 144 aaPredicted RBP6.67□□□□□ -1.34
LINC00342-201ENST00000412393 CLCN7P51798 805 aa6.67□□□□□ -1.34
LINC00342-201ENST00000412393 EIF6P56537 245 aaKnown RBP6.67□□□□□ -1.34
LINC00342-201ENST00000412393 HTRA3P83110 453 aa6.67□□□□□ -1.34
LINC00342-201ENST00000412393 SF3B3Q15393 1217 aaKnown RBP6.67□□□□□ -1.34
LINC00342-201ENST00000412393 TWISTNBQ3B726 338 aaPredicted RBP6.67□□□□□ -1.34
LINC00342-201ENST00000412393 TMEM67Q5HYA8 995 aa6.67□□□□□ -1.34
LINC00342-201ENST00000412393 DPP8Q6V1X1 898 aaPredicted RBP6.67□□□□□ -1.34
LINC00342-201ENST00000412393 TMC4Q7Z404 712 aa6.67□□□□□ -1.34
LINC00342-201ENST00000412393 WDR63Q8IWG1 891 aa6.67□□□□□ -1.34
LINC00342-201ENST00000412393 NIM1KQ8IY84 436 aa6.67□□□□□ -1.34
LINC00342-201ENST00000412393 CCDC191Q8NCU4 936 aa6.67□□□□□ -1.34
LINC00342-201ENST00000412393 SUPT20HQ8NEM7 779 aa6.67□□□□□ -1.34
LINC00342-201ENST00000412393 UBE2Q2Q8WVN8 375 aa6.67□□□□□ -1.34
LINC00342-201ENST00000412393 CCDC120Q96HB5 630 aa6.67□□□□□ -1.34
LINC00342-201ENST00000412393 KIRREL1Q96J84 757 aa6.67□□□□□ -1.34
LINC00342-201ENST00000412393 IPO9Q96P70 1041 aaKnown RBP6.67□□□□□ -1.34
LINC00342-201ENST00000412393 KRTAP17-1Q9BYP8 105 aa6.67□□□□□ -1.34
LINC00342-201ENST00000412393 TAF1DQ9H5J8 278 aaPredicted RBP6.67□□□□□ -1.34
LINC00342-201ENST00000412393 HACL1Q9UJ83 578 aa6.67□□□□□ -1.34
LINC00342-201ENST00000412393 MTMR7Q9Y216 660 aa6.67□□□□□ -1.34
LINC00342-201ENST00000412393 MAP3K2Q9Y2U5 619 aa6.67□□□□□ -1.34
LINC00342-201ENST00000412393 U3KQE9 123 aa6.67□□□□□ -1.34
LINC00342-201ENST00000412393 TRPM7Q96QT4 1865 aa6.66□□□□□ -1.34
LINC00342-201ENST00000412393 POLR2AP24928 1970 aaKnown RBP6.66□□□□□ -1.34
LINC00342-201ENST00000412393 COL4A1P02462 1669 aa6.66□□□□□ -1.34
LINC00342-201ENST00000412393 PI4KAP2A4QPH2 592 aa6.66□□□□□ -1.34
LINC00342-201ENST00000412393 PCCAP05165 728 aaPredicted RBP6.66□□□□□ -1.34
LINC00342-201ENST00000412393 C1QTNF9P0C862 333 aa6.66□□□□□ -1.34
LINC00342-201ENST00000412393 ECM1Q16610 540 aa6.66□□□□□ -1.34
LINC00342-201ENST00000412393 EAPPQ56P03 285 aaPredicted RBP6.66□□□□□ -1.34
LINC00342-201ENST00000412393 KSR2Q6VAB6 950 aa6.66□□□□□ -1.34
LINC00342-201ENST00000412393 CYFIP1Q7L576 1253 aa6.66□□□□□ -1.34
LINC00342-201ENST00000412393 G2E3Q7L622 706 aa6.66□□□□□ -1.34
LINC00342-201ENST00000412393 LDHDQ86WU2 507 aa6.66□□□□□ -1.34
LINC00342-201ENST00000412393 GPC2Q8N158 579 aa6.66□□□□□ -1.34
LINC00342-201ENST00000412393 DNAJC5GQ8N7S2 189 aa6.66□□□□□ -1.34
LINC00342-201ENST00000412393 PI4KAP1Q8N8J0 262 aa6.66□□□□□ -1.34
LINC00342-201ENST00000412393 ZBTB38Q8NAP3 1195 aaPredicted RBP6.66□□□□□ -1.34
LINC00342-201ENST00000412393 JARID2Q92833 1246 aaPredicted RBP6.66□□□□□ -1.34
LINC00342-201ENST00000412393 CELF1Q92879 486 aaKnown RBP6.66□□□□□ -1.34
LINC00342-201ENST00000412393 RTFDC1Q9BY42 306 aaPredicted RBP6.66□□□□□ -1.34
LINC00342-201ENST00000412393 VPS33BQ9H267 617 aa6.66□□□□□ -1.34
LINC00342-201ENST00000412393 CWC25Q9NXE8 425 aaPredicted RBP6.66□□□□□ -1.34
LINC00342-201ENST00000412393 PCDHGC5Q9Y5F6 944 aa6.66□□□□□ -1.34
LINC00342-201ENST00000412393 LTBP1Q14766 1721 aa6.66□□□□□ -1.34
LINC00342-201ENST00000412393 ADAMTSL1Q8N6G6 1762 aa6.66□□□□□ -1.34
LINC00342-201ENST00000412393 CEP350Q5VT06 3117 aa6.65□□□□□ -1.34
LINC00342-201ENST00000412393 DUOX1Q9NRD9 1551 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms