RNA–Protein interactions for RNA: ENST00000412141.1

LINC00963-201, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best)

Gene LINC00963, Length 739 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-201ENST00000412141 TBX21Q9UL17 535 aa13.49□□□□□ -0.25
LINC00963-201ENST00000412141 PCDHA1Q9Y5I3 950 aa13.49□□□□□ -0.25
LINC00963-201ENST00000412141 RBM47A0AV96 593 aaKnown RBP13.48□□□□□ -0.25
LINC00963-201ENST00000412141 ZBTB5O15062 677 aa13.48□□□□□ -0.25
LINC00963-201ENST00000412141 PRC1O43663 620 aa13.48□□□□□ -0.25
LINC00963-201ENST00000412141 CABYRO75952 493 aa13.48□□□□□ -0.25
LINC00963-201ENST00000412141 ARIH2O95376 493 aa13.48□□□□□ -0.25
LINC00963-201ENST00000412141 ACRP10323 421 aa13.48□□□□□ -0.25
LINC00963-201ENST00000412141 CSF2RAP15509 400 aa13.48□□□□□ -0.25
LINC00963-201ENST00000412141 EDNRBP24530 442 aa13.48□□□□□ -0.25
LINC00963-201ENST00000412141 HOXA13P31271 388 aaPredicted RBP13.48□□□□□ -0.25
LINC00963-201ENST00000412141 COL9A3Q14050 684 aaPredicted RBP13.48□□□□□ -0.25
LINC00963-201ENST00000412141 GRM4Q14833 912 aa13.48□□□□□ -0.25
LINC00963-201ENST00000412141 FAM47CQ5HY64 1035 aa13.48□□□□□ -0.25
LINC00963-201ENST00000412141 CENPQQ7L2Z9 268 aaPredicted RBP13.48□□□□□ -0.25
LINC00963-201ENST00000412141 RAB11FIP4Q86YS3 637 aa13.48□□□□□ -0.25
LINC00963-201ENST00000412141 NSUN6Q8TEA1 469 aaKnown RBP13.48□□□□□ -0.25
LINC00963-201ENST00000412141 SCFD2Q8WU76 684 aa13.48□□□□□ -0.25
LINC00963-201ENST00000412141 ZFP91Q96JP5 570 aaPredicted RBP13.48□□□□□ -0.25
LINC00963-201ENST00000412141 LSG1Q9H089 658 aaKnown RBP13.48□□□□□ -0.25
LINC00963-201ENST00000412141 Q9Y3F1 56 aa13.48□□□□□ -0.25
LINC00963-201ENST00000412141 LTBP2Q14767 1821 aa13.48□□□□□ -0.25
LINC00963-201ENST00000412141 VCANP13611 3396 aa13.47□□□□□ -0.25
LINC00963-201ENST00000412141 DLL1O00548 723 aa13.47□□□□□ -0.25
LINC00963-201ENST00000412141 SLC27A2O14975 620 aa13.47□□□□□ -0.25
LINC00963-201ENST00000412141 SORBS3O60504 671 aa13.47□□□□□ -0.25
LINC00963-201ENST00000412141 MYCLP12524 364 aaPredicted RBP13.47□□□□□ -0.25
LINC00963-201ENST00000412141 CPT1AP50416 773 aa13.47□□□□□ -0.25
LINC00963-201ENST00000412141 CCL23P55773 120 aa13.47□□□□□ -0.25
LINC00963-201ENST00000412141 NKX3-2P78367 333 aa13.47□□□□□ -0.25
LINC00963-201ENST00000412141 TTLL4Q14679 1199 aa13.47□□□□□ -0.25
LINC00963-201ENST00000412141 LY6KQ17RY6 165 aa13.47□□□□□ -0.25
LINC00963-201ENST00000412141 MFSD5Q6N075 450 aa13.47□□□□□ -0.25
LINC00963-201ENST00000412141 CASC1Q6TDU7 716 aa13.47□□□□□ -0.25
LINC00963-201ENST00000412141 NFXL1Q6ZNB6 911 aa13.47□□□□□ -0.25
LINC00963-201ENST00000412141 MB21D2Q8IYB1 491 aaPredicted RBP13.47□□□□□ -0.25
LINC00963-201ENST00000412141 IGDCC4Q8TDY8 1250 aa13.47□□□□□ -0.25
LINC00963-201ENST00000412141 LRRC2Q9BYS8 371 aa13.47□□□□□ -0.25
LINC00963-201ENST00000412141 STXBP5LQ9Y2K9 1186 aa13.47□□□□□ -0.25
LINC00963-201ENST00000412141 LRRC37A2A6NM11 1700 aa13.47□□□□□ -0.25
LINC00963-201ENST00000412141 UMODL1Q5DID0 1318 aa13.46□□□□□ -0.25
LINC00963-201ENST00000412141 LOC102724159A0A0B4J2E5 919 aa13.46□□□□□ -0.25
LINC00963-201ENST00000412141 OPLAHO14841 1288 aa13.46□□□□□ -0.25
LINC00963-201ENST00000412141 CYTH3O43739 400 aa13.46□□□□□ -0.25
LINC00963-201ENST00000412141 B4GALT4O60513 344 aa13.46□□□□□ -0.25
LINC00963-201ENST00000412141 RXRAP19793 462 aa13.46□□□□□ -0.25
LINC00963-201ENST00000412141 PURAQ00577 322 aaKnown RBP13.46□□□□□ -0.25
LINC00963-201ENST00000412141 TROAPQ12815 778 aa13.46□□□□□ -0.25
LINC00963-201ENST00000412141 PWP2Q15269 919 aaKnown RBP13.46□□□□□ -0.25
LINC00963-201ENST00000412141 STXBP2Q15833 593 aa13.46□□□□□ -0.25
LINC00963-201ENST00000412141 BRDTQ58F21 947 aaPredicted RBP13.46□□□□□ -0.25
LINC00963-201ENST00000412141 CREB3L3Q68CJ9 461 aa13.46□□□□□ -0.25
LINC00963-201ENST00000412141 FCHSD1Q86WN1 690 aa13.46□□□□□ -0.25
LINC00963-201ENST00000412141 SLC43A3Q8NBI5 491 aa13.46□□□□□ -0.25
LINC00963-201ENST00000412141 AFG1LQ8WV93 481 aa13.46□□□□□ -0.25
LINC00963-201ENST00000412141 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.46□□□□□ -0.25
LINC00963-201ENST00000412141 MTG1Q9BT17 334 aaPredicted RBP13.46□□□□□ -0.25
LINC00963-201ENST00000412141 HIPK3Q9H422 1215 aa13.46□□□□□ -0.25
LINC00963-201ENST00000412141 LY9Q9HBG7 655 aa13.46□□□□□ -0.25
LINC00963-201ENST00000412141 TRMT13Q9NUP7 481 aaKnown RBP13.46□□□□□ -0.25
LINC00963-201ENST00000412141 POLR3EQ9NVU0 708 aa13.46□□□□□ -0.25
LINC00963-201ENST00000412141 CD4P01730 458 aa13.45□□□□□ -0.26
LINC00963-201ENST00000412141 NR3C2P08235 984 aa13.45□□□□□ -0.26
LINC00963-201ENST00000412141 CYP2C9P11712 490 aa13.45□□□□□ -0.26
LINC00963-201ENST00000412141 PPIGQ13427 754 aaKnown RBP eCLIP13.45□□□□□ -0.26
LINC00963-201ENST00000412141 NBPF20Q3BBV1 942 aa13.45□□□□□ -0.26
LINC00963-201ENST00000412141 C16orf59Q7L2K0 433 aa13.45□□□□□ -0.26
LINC00963-201ENST00000412141 ZNF654Q8IZM8 581 aa13.45□□□□□ -0.26
LINC00963-201ENST00000412141 CMTR1Q8N1G2 835 aaKnown RBP13.45□□□□□ -0.26
LINC00963-201ENST00000412141 TMEM199Q8N511 208 aa13.45□□□□□ -0.26
LINC00963-201ENST00000412141 MTMR8Q96EF0 704 aa13.45□□□□□ -0.26
LINC00963-201ENST00000412141 ALDH8A1Q9H2A2 487 aaPredicted RBP13.45□□□□□ -0.26
LINC00963-201ENST00000412141 RIOX1Q9H6W3 641 aa13.45□□□□□ -0.26
LINC00963-201ENST00000412141 PXMP2Q9NR77 195 aa13.45□□□□□ -0.26
LINC00963-201ENST00000412141 MYH6P13533 1939 aa13.45□□□□□ -0.26
LINC00963-201ENST00000412141 PNMA6FA0A0J9YX94 578 aa13.44□□□□□ -0.26
LINC00963-201ENST00000412141 hCG_1642624A0A1W2PR95 340 aa13.44□□□□□ -0.26
LINC00963-201ENST00000412141 CCDC69A6NI79 296 aa13.44□□□□□ -0.26
LINC00963-201ENST00000412141 GRXCR1A8MXD5 290 aa13.44□□□□□ -0.26
LINC00963-201ENST00000412141 NKRFO15226 690 aaKnown RBP eCLIP13.44□□□□□ -0.26
LINC00963-201ENST00000412141 MCM5P33992 734 aa13.44□□□□□ -0.26
LINC00963-201ENST00000412141 BMP2KLQ5H9B9 411 aa13.44□□□□□ -0.26
LINC00963-201ENST00000412141 ZNF697Q5TEC3 545 aa13.44□□□□□ -0.26
LINC00963-201ENST00000412141 FAM109BQ6ICB4 259 aaPredicted RBP13.44□□□□□ -0.26
LINC00963-201ENST00000412141 CCDC62Q6P9F0 684 aa13.44□□□□□ -0.26
LINC00963-201ENST00000412141 ZNF365Q70YC5 407 aa13.44□□□□□ -0.26
LINC00963-201ENST00000412141 CCDC82Q8N4S0 544 aa13.44□□□□□ -0.26
LINC00963-201ENST00000412141 IL31RAQ8NI17 732 aa13.44□□□□□ -0.26
LINC00963-201ENST00000412141 CTCFLQ8NI51 663 aaPredicted RBP13.44□□□□□ -0.26
LINC00963-201ENST00000412141 IWS1Q96ST2 819 aa13.44□□□□□ -0.26
LINC00963-201ENST00000412141 MRVI1Q9Y6F6 885 aa13.44□□□□□ -0.26
LINC00963-201ENST00000412141 A6NJR5 290 aa13.43□□□□□ -0.26
LINC00963-201ENST00000412141 GCOM1H8Y6P7 765 aaPredicted RBP13.43□□□□□ -0.26
LINC00963-201ENST00000412141 SH2B2O14492 632 aaPredicted RBP13.43□□□□□ -0.26
LINC00963-201ENST00000412141 EIF3JO75822 258 aaKnown RBP13.43□□□□□ -0.26
LINC00963-201ENST00000412141 PLEKHA8P1O95397 391 aa13.43□□□□□ -0.26
LINC00963-201ENST00000412141 GH1P01241 217 aa13.43□□□□□ -0.26
LINC00963-201ENST00000412141 POLR2MP0CAP2 368 aa13.43□□□□□ -0.26
LINC00963-201ENST00000412141 HSD17B4P51659 736 aa13.43□□□□□ -0.26
LINC00963-201ENST00000412141 NECTIN1Q15223 517 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms