RNA–Protein interactions for RNA: ENST00000411850.5

TOM1-204, Transcript of target of myb1 membrane trafficking protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TOM1, Length 2,390 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-204ENST00000411850 FXR2P51116 673 aaKnown RBP eCLIP18.83■□□□□ 0.6
TOM1-204ENST00000411850 HNRNPH2P55795 449 aaKnown RBP18.83■□□□□ 0.6
TOM1-204ENST00000411850 CKAP4Q07065 602 aaKnown RBP18.83■□□□□ 0.6
TOM1-204ENST00000411850 SV2BQ7L1I2 683 aa18.83■□□□□ 0.6
TOM1-204ENST00000411850 POTEDQ86YR6 584 aa18.83■□□□□ 0.6
TOM1-204ENST00000411850 NEK11Q8NG66 645 aa18.83■□□□□ 0.6
TOM1-204ENST00000411850 GPR101Q96P66 508 aaPredicted RBP18.83■□□□□ 0.6
TOM1-204ENST00000411850 LACRTQ9GZZ8 138 aa18.83■□□□□ 0.6
TOM1-204ENST00000411850 SUGCTQ9HAC7 445 aa18.83■□□□□ 0.6
TOM1-204ENST00000411850 TFR2Q9UP52 801 aa18.83■□□□□ 0.6
TOM1-204ENST00000411850 RCCD1A6NED2 376 aa18.82■□□□□ 0.6
TOM1-204ENST00000411850 HOXA7P31268 230 aaPredicted RBP18.82■□□□□ 0.6
TOM1-204ENST00000411850 RHBDL3P58872 404 aa18.82■□□□□ 0.6
TOM1-204ENST00000411850 GPSM2P81274 684 aa18.82■□□□□ 0.6
TOM1-204ENST00000411850 GRB10Q13322 594 aa18.82■□□□□ 0.6
TOM1-204ENST00000411850 EEF2KMTQ96G04 330 aa18.82■□□□□ 0.6
TOM1-204ENST00000411850 BLOC1S4Q9NUP1 217 aa18.82■□□□□ 0.6
TOM1-204ENST00000411850 BIN2Q9UBW5 565 aaPredicted RBP18.82■□□□□ 0.6
TOM1-204ENST00000411850 UNC13DQ70J99 1090 aa18.82■□□□□ 0.6
TOM1-204ENST00000411850 PCMTD1Q96MG8 357 aaPredicted RBP18.82■□□□□ 0.6
TOM1-204ENST00000411850 MMS19Q96T76 1030 aa18.82■□□□□ 0.6
TOM1-204ENST00000411850 ABCB11O95342 1321 aa18.81■□□□□ 0.6
TOM1-204ENST00000411850 TARSL2A2RTX5 802 aaKnown RBP18.81■□□□□ 0.6
TOM1-204ENST00000411850 VAV2P52735 878 aa18.81■□□□□ 0.6
TOM1-204ENST00000411850 MUM1L1Q5H9M0 696 aa18.81■□□□□ 0.6
TOM1-204ENST00000411850 SLF2Q8IX21 1173 aa18.81■□□□□ 0.6
TOM1-204ENST00000411850 TSGA10Q9BZW7 698 aa18.81■□□□□ 0.6
TOM1-204ENST00000411850 VAT1LQ9HCJ6 419 aa18.81■□□□□ 0.6
TOM1-204ENST00000411850 LRWD1Q9UFC0 647 aa18.81■□□□□ 0.6
TOM1-204ENST00000411850 PLIN4Q96Q06 1357 aa18.81■□□□□ 0.6
TOM1-204ENST00000411850 USP17L5A8MUK1 530 aa18.81■□□□□ 0.6
TOM1-204ENST00000411850 ATP2B4P23634 1241 aa18.81■□□□□ 0.6
TOM1-204ENST00000411850 TXKP42681 527 aa18.81■□□□□ 0.6
TOM1-204ENST00000411850 GYS2P54840 703 aa18.81■□□□□ 0.6
TOM1-204ENST00000411850 CALCRLQ16602 461 aa18.81■□□□□ 0.6
TOM1-204ENST00000411850 VWA3BQ502W6 1294 aa18.81■□□□□ 0.6
TOM1-204ENST00000411850 RPGRQ92834 1020 aaKnown RBP18.81■□□□□ 0.6
TOM1-204ENST00000411850 PNMA5Q96PV4 448 aa18.81■□□□□ 0.6
TOM1-204ENST00000411850 TMEM260Q9NX78 707 aa18.81■□□□□ 0.6
TOM1-204ENST00000411850 PLAGL2Q9UPG8 496 aa18.81■□□□□ 0.6
TOM1-204ENST00000411850 GAKO14976 1311 aa18.8■□□□□ 0.6
TOM1-204ENST00000411850 MYMKA6NI61 221 aa18.8■□□□□ 0.6
TOM1-204ENST00000411850 PDHBP11177 359 aa18.8■□□□□ 0.6
TOM1-204ENST00000411850 PDIA5Q14554 519 aa18.8■□□□□ 0.6
TOM1-204ENST00000411850 GUF1Q8N442 669 aaKnown RBP18.8■□□□□ 0.6
TOM1-204ENST00000411850 HPS3Q969F9 1004 aa18.8■□□□□ 0.6
TOM1-204ENST00000411850 ACBD3Q9H3P7 528 aa18.8■□□□□ 0.6
TOM1-204ENST00000411850 VIPAS39Q9H9C1 493 aa18.8■□□□□ 0.6
TOM1-204ENST00000411850 SLC39A2Q9NP94 309 aa18.8■□□□□ 0.6
TOM1-204ENST00000411850 SIK3Q9Y2K2 1263 aa18.8■□□□□ 0.6
TOM1-204ENST00000411850 SRGAP2O75044 1071 aa18.79■□□□□ 0.6
TOM1-204ENST00000411850 UFL1O94874 794 aa18.79■□□□□ 0.6
TOM1-204ENST00000411850 FGFR1OPO95684 399 aaKnown RBP18.79■□□□□ 0.6
TOM1-204ENST00000411850 DDR1Q08345 913 aa18.79■□□□□ 0.6
TOM1-204ENST00000411850 KIF5AQ12840 1032 aa18.79■□□□□ 0.6
TOM1-204ENST00000411850 TMEM266Q2M3C6 531 aa18.79■□□□□ 0.6
TOM1-204ENST00000411850 UBA5Q9GZZ9 404 aa18.79■□□□□ 0.6
TOM1-204ENST00000411850 POLRMTO00411 1230 aaKnown RBP18.79■□□□□ 0.6
TOM1-204ENST00000411850 ASPRV1Q53RT3 343 aa18.79■□□□□ 0.6
TOM1-204ENST00000411850 FOXR2Q6PJQ5 311 aa18.79■□□□□ 0.6
TOM1-204ENST00000411850 FAM71BQ8TC56 605 aa18.79■□□□□ 0.6
TOM1-204ENST00000411850 LARP4BQ92615 738 aaKnown RBP18.79■□□□□ 0.6
TOM1-204ENST00000411850 CCDC42Q96M95 316 aa18.79■□□□□ 0.6
TOM1-204ENST00000411850 RAB34Q9BZG1 259 aa18.79■□□□□ 0.6
TOM1-204ENST00000411850 NDST4Q9H3R1 872 aa18.79■□□□□ 0.6
TOM1-204ENST00000411850 VPS18Q9P253 973 aa18.79■□□□□ 0.6
TOM1-204ENST00000411850 NKRFO15226 690 aaKnown RBP eCLIP18.78■□□□□ 0.6
TOM1-204ENST00000411850 ADCY7P51828 1080 aa18.78■□□□□ 0.6
TOM1-204ENST00000411850 SPA17Q15506 151 aa18.78■□□□□ 0.6
TOM1-204ENST00000411850 MAP9Q49MG5 647 aa18.78■□□□□ 0.6
TOM1-204ENST00000411850 ZNF772Q68DY9 489 aaPredicted RBP18.78■□□□□ 0.6
TOM1-204ENST00000411850 MED4Q9NPJ6 270 aa18.78■□□□□ 0.6
TOM1-204ENST00000411850 GGA1Q9UJY5 639 aa18.78■□□□□ 0.6
TOM1-204ENST00000411850 LRRIQ3A6PVS8 624 aaPredicted RBP18.78■□□□□ 0.6
TOM1-204ENST00000411850 ZNF263O14978 683 aa18.78■□□□□ 0.6
TOM1-204ENST00000411850 EDIL3O43854 480 aa18.78■□□□□ 0.6
TOM1-204ENST00000411850 N4BP1O75113 896 aaKnown RBP18.78■□□□□ 0.6
TOM1-204ENST00000411850 LCA5LO95447 670 aa18.78■□□□□ 0.6
TOM1-204ENST00000411850 CYP27A1Q02318 531 aa18.78■□□□□ 0.6
TOM1-204ENST00000411850 LRRC63Q05C16 580 aa18.78■□□□□ 0.6
TOM1-204ENST00000411850 MAN2A1Q16706 1144 aa18.78■□□□□ 0.6
TOM1-204ENST00000411850 CCDC84Q86UT8 332 aaPredicted RBP18.78■□□□□ 0.6
TOM1-204ENST00000411850 SECISBP2LQ93073 1101 aaKnown RBP18.78■□□□□ 0.6
TOM1-204ENST00000411850 RBM17Q96I25 401 aaKnown RBP18.78■□□□□ 0.6
TOM1-204ENST00000411850 CDK5RAP3Q96JB5 506 aa18.78■□□□□ 0.6
TOM1-204ENST00000411850 LRRC27Q9C0I9 530 aa18.78■□□□□ 0.6
TOM1-204ENST00000411850 MTMR4Q9NYA4 1195 aa18.78■□□□□ 0.6
TOM1-204ENST00000411850 DUSP10Q9Y6W6 482 aa18.78■□□□□ 0.6
TOM1-204ENST00000411850 KLRG2A4D1S0 409 aaPredicted RBP18.77■□□□□ 0.6
TOM1-204ENST00000411850 PLSCR1O15162 318 aa18.77■□□□□ 0.6
TOM1-204ENST00000411850 SLC37A4O43826 429 aa18.77■□□□□ 0.6
TOM1-204ENST00000411850 SNHG28P0DPA3 235 aa18.77■□□□□ 0.6
TOM1-204ENST00000411850 PSMD2Q13200 908 aa18.77■□□□□ 0.6
TOM1-204ENST00000411850 MFSD14BQ5SR56 506 aa18.77■□□□□ 0.6
TOM1-204ENST00000411850 TBC1D22AQ8WUA7 517 aa18.77■□□□□ 0.6
TOM1-204ENST00000411850 RAD54LQ92698 747 aa18.77■□□□□ 0.6
TOM1-204ENST00000411850 USO1O60763 962 aaKnown RBP18.77■□□□□ 0.6
TOM1-204ENST00000411850 HOXA10P31260 410 aaPredicted RBP18.77■□□□□ 0.6
TOM1-204ENST00000411850 EHHADHQ08426 723 aa18.77■□□□□ 0.6
TOM1-204ENST00000411850 HSP90B2PQ58FF3 399 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms