RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 HNRNPDLO14979 420 aaKnown RBP12.22□□□□□ -0.45
PRPF40A-202ENST00000410080 VCPP55072 806 aaKnown RBP12.22□□□□□ -0.45
PRPF40A-202ENST00000410080 PNOCQ13519 176 aa12.22□□□□□ -0.45
PRPF40A-202ENST00000410080 CACTINQ8WUQ7 758 aaKnown RBP12.22□□□□□ -0.45
PRPF40A-202ENST00000410080 CDKL2Q92772 493 aa12.22□□□□□ -0.45
PRPF40A-202ENST00000410080 GPKOWQ92917 476 aaPredicted RBP eCLIP12.22□□□□□ -0.452e-6■□□□□ 11.1
PRPF40A-202ENST00000410080 EPS15L1Q9UBC2 864 aa12.22□□□□□ -0.45
PRPF40A-202ENST00000410080 EDC4Q6P2E9 1401 aaKnown RBP12.22□□□□□ -0.45
PRPF40A-202ENST00000410080 CFAP36Q96G28 342 aa12.22□□□□□ -0.45
PRPF40A-202ENST00000410080 ARPP21Q9UBL0 812 aaPredicted RBP12.22□□□□□ -0.45
PRPF40A-202ENST00000410080 DENND3A2RUS2 1198 aa12.22□□□□□ -0.45
PRPF40A-202ENST00000410080 EVI5O60447 810 aa12.22□□□□□ -0.45
PRPF40A-202ENST00000410080 RUFY4Q6ZNE9 571 aa12.22□□□□□ -0.45
PRPF40A-202ENST00000410080 FLAD1Q8NFF5 587 aa12.22□□□□□ -0.45
PRPF40A-202ENST00000410080 EDC3Q96F86 508 aaKnown RBP12.22□□□□□ -0.45
PRPF40A-202ENST00000410080 LRRC4Q9HBW1 653 aa12.22□□□□□ -0.45
PRPF40A-202ENST00000410080 FAM173BQ6P4H8 233 aa12.22□□□□□ -0.45
PRPF40A-202ENST00000410080 DBNDD1Q9H9R9 158 aa12.22□□□□□ -0.45
PRPF40A-202ENST00000410080 IREB2P48200 963 aaKnown RBP12.22□□□□□ -0.45
PRPF40A-202ENST00000410080 RCN2Q14257 317 aa12.22□□□□□ -0.45
PRPF40A-202ENST00000410080 ZNF148Q9UQR1 794 aa12.22□□□□□ -0.45
PRPF40A-202ENST00000410080 ZNF233A6NK53 670 aa12.21□□□□□ -0.45
PRPF40A-202ENST00000410080 KCNQ4P56696 695 aa12.21□□□□□ -0.45
PRPF40A-202ENST00000410080 IRX4P78413 519 aa12.21□□□□□ -0.45
PRPF40A-202ENST00000410080 YAF2Q8IY57 180 aa12.21□□□□□ -0.45
PRPF40A-202ENST00000410080 MORC4Q8TE76 937 aa12.21□□□□□ -0.45
PRPF40A-202ENST00000410080 GDAP1L1Q96MZ0 367 aa12.21□□□□□ -0.45
PRPF40A-202ENST00000410080 IFT122Q9HBG6 1241 aa12.21□□□□□ -0.45
PRPF40A-202ENST00000410080 KRT82Q9NSB4 513 aa12.21□□□□□ -0.45
PRPF40A-202ENST00000410080 GCC2Q8IWJ2 1684 aa12.21□□□□□ -0.45
PRPF40A-202ENST00000410080 PARD3Q8TEW0 1356 aa12.21□□□□□ -0.45
PRPF40A-202ENST00000410080 ATF2P15336 505 aa12.21□□□□□ -0.45
PRPF40A-202ENST00000410080 CIITAP33076 1130 aa12.21□□□□□ -0.45
PRPF40A-202ENST00000410080 TRAPPC10P48553 1259 aa12.21□□□□□ -0.45
PRPF40A-202ENST00000410080 MYL7Q01449 175 aa12.21□□□□□ -0.45
PRPF40A-202ENST00000410080 YWHAHQ04917 246 aaPredicted RBP12.21□□□□□ -0.45
PRPF40A-202ENST00000410080 PPARAQ07869 468 aa12.21□□□□□ -0.45
PRPF40A-202ENST00000410080 ADD3Q9UEY8 706 aaKnown RBP12.21□□□□□ -0.45
PRPF40A-202ENST00000410080 WDR17Q8IZU2 1322 aa12.21□□□□□ -0.45
PRPF40A-202ENST00000410080 ZBTB7BO15156 539 aaPredicted RBP12.21□□□□□ -0.45
PRPF40A-202ENST00000410080 KCNQ3O43525 872 aa12.21□□□□□ -0.45
PRPF40A-202ENST00000410080 INHBAP08476 426 aa12.21□□□□□ -0.45
PRPF40A-202ENST00000410080 BTDP43251 543 aa12.21□□□□□ -0.45
PRPF40A-202ENST00000410080 KCNA1Q09470 495 aa12.21□□□□□ -0.45
PRPF40A-202ENST00000410080 PDCD2Q16342 344 aaPredicted RBP12.21□□□□□ -0.45
PRPF40A-202ENST00000410080 KRT71Q3SY84 523 aa12.21□□□□□ -0.45
PRPF40A-202ENST00000410080 MAP3K21Q5TCX8 1036 aa12.21□□□□□ -0.45
PRPF40A-202ENST00000410080 EFCAB13Q8IY85 973 aa12.21□□□□□ -0.45
PRPF40A-202ENST00000410080 PGBD3Q8N328 593 aa12.21□□□□□ -0.45
PRPF40A-202ENST00000410080 KAT6AQ92794 2004 aa12.21□□□□□ -0.45
PRPF40A-202ENST00000410080 CUTAO60888 179 aa12.21□□□□□ -0.45
PRPF40A-202ENST00000410080 YWHAGP61981 247 aaKnown RBP eCLIP12.21□□□□□ -0.45
PRPF40A-202ENST00000410080 MTX1Q13505 466 aa12.21□□□□□ -0.45
PRPF40A-202ENST00000410080 RSBN1LQ6PCB5 846 aaPredicted RBP12.21□□□□□ -0.45
PRPF40A-202ENST00000410080 DSTYKQ6XUX3 929 aa12.21□□□□□ -0.45
PRPF40A-202ENST00000410080 TRMT44Q8IYL2 757 aaKnown RBP12.21□□□□□ -0.45
PRPF40A-202ENST00000410080 TRAIPQ9BWF2 469 aa12.21□□□□□ -0.46
PRPF40A-202ENST00000410080 SCARA5Q6ZMJ2 495 aa12.21□□□□□ -0.46
PRPF40A-202ENST00000410080 SLF1Q9BQI6 1058 aa12.21□□□□□ -0.46
PRPF40A-202ENST00000410080 DDX41Q9UJV9 622 aaKnown RBP12.21□□□□□ -0.46
PRPF40A-202ENST00000410080 USH1CQ9Y6N9 552 aa12.21□□□□□ -0.46
PRPF40A-202ENST00000410080 RECQLP46063 649 aaPredicted RBP12.21□□□□□ -0.46
PRPF40A-202ENST00000410080 STAT2P52630 851 aa12.21□□□□□ -0.46
PRPF40A-202ENST00000410080 ERFEQ4G0M1 354 aa12.21□□□□□ -0.46
PRPF40A-202ENST00000410080 DALRD3Q5D0E6 543 aaKnown RBP12.21□□□□□ -0.46
PRPF40A-202ENST00000410080 SMC5Q8IY18 1101 aa12.21□□□□□ -0.46
PRPF40A-202ENST00000410080 ANLNQ9NQW6 1124 aa12.21□□□□□ -0.46
PRPF40A-202ENST00000410080 NXF1Q9UBU9 619 aaKnown RBP12.21□□□□□ -0.46
PRPF40A-202ENST00000410080 HPCAL4Q9UM19 191 aa12.21□□□□□ -0.46
PRPF40A-202ENST00000410080 EEF1GP26641 437 aaKnown RBP12.2□□□□□ -0.46
PRPF40A-202ENST00000410080 ARHGDIAP52565 204 aa12.2□□□□□ -0.46
PRPF40A-202ENST00000410080 SNX1Q13596 522 aa12.2□□□□□ -0.46
PRPF40A-202ENST00000410080 SNX21Q969T3 373 aa12.2□□□□□ -0.46
PRPF40A-202ENST00000410080 CPP00450 1065 aa12.2□□□□□ -0.46
PRPF40A-202ENST00000410080 GOLGA8FQ08AF8 430 aa12.2□□□□□ -0.46
PRPF40A-202ENST00000410080 GOLGA8DPQ0D2H9 430 aa12.2□□□□□ -0.46
PRPF40A-202ENST00000410080 MYO1EQ12965 1108 aa12.2□□□□□ -0.46
PRPF40A-202ENST00000410080 CAPRIN1Q14444 709 aaKnown RBP12.2□□□□□ -0.46
PRPF40A-202ENST00000410080 DIS3L2Q8IYB7 885 aaKnown RBP12.2□□□□□ -0.46
PRPF40A-202ENST00000410080 DEPDC1BQ8WUY9 529 aa12.2□□□□□ -0.46
PRPF40A-202ENST00000410080 TMEM247A6NEH6 219 aa12.2□□□□□ -0.46
PRPF40A-202ENST00000410080 CLNS1AP54105 237 aaKnown RBP12.2□□□□□ -0.46
PRPF40A-202ENST00000410080 OTULINQ96BN8 352 aa12.2□□□□□ -0.46
PRPF40A-202ENST00000410080 MAGEA1P43355 309 aa12.2□□□□□ -0.46
PRPF40A-202ENST00000410080 CDO1Q16878 200 aa12.2□□□□□ -0.46
PRPF40A-202ENST00000410080 DCAF4L1Q3SXM0 396 aa12.2□□□□□ -0.46
PRPF40A-202ENST00000410080 C2orf69Q8N8R5 385 aa12.2□□□□□ -0.46
PRPF40A-202ENST00000410080 GOLGA5Q8TBA6 731 aa12.2□□□□□ -0.46
PRPF40A-202ENST00000410080 F8W8V4 182 aa12.2□□□□□ -0.46
PRPF40A-202ENST00000410080 PDE1BQ01064 536 aa12.2□□□□□ -0.46
PRPF40A-202ENST00000410080 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.2□□□□□ -0.46
PRPF40A-202ENST00000410080 URGCPQ8TCY9 931 aa12.2□□□□□ -0.46
PRPF40A-202ENST00000410080 ZSCAN10Q96SZ4 725 aaPredicted RBP12.2□□□□□ -0.46
PRPF40A-202ENST00000410080 KMT5AQ9NQR1 393 aa12.2□□□□□ -0.46
PRPF40A-202ENST00000410080 ARHGEF10O15013 1369 aa12.2□□□□□ -0.46
PRPF40A-202ENST00000410080 ATP10AO60312 1499 aa12.2□□□□□ -0.46
PRPF40A-202ENST00000410080 H0YCG3 227 aa12.2□□□□□ -0.46
PRPF40A-202ENST00000410080 JAK2O60674 1132 aa12.2□□□□□ -0.46
PRPF40A-202ENST00000410080 SYF2O95926 243 aaKnown RBP12.2□□□□□ -0.46
PRPF40A-202ENST00000410080 MYOCDQ8IZQ8 938 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms