RNA–Protein interactions for RNA: ENST00000409953.5

UBE2F-204, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 3 BASIC

Gene UBE2F, Length 924 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-204ENST00000409953 RIOX2Q8IUF8 465 aa8.65□□□□□ -1.02
UBE2F-204ENST00000409953 FOXP4Q8IVH2 680 aaPredicted RBP8.65□□□□□ -1.02
UBE2F-204ENST00000409953 LPIN2Q92539 896 aa8.65□□□□□ -1.02
UBE2F-204ENST00000409953 RTP3Q9BQQ7 232 aa8.65□□□□□ -1.02
UBE2F-204ENST00000409953 STK31Q9BXU1 1019 aa8.65□□□□□ -1.02
UBE2F-204ENST00000409953 AP5M1Q9H0R1 490 aa8.65□□□□□ -1.02
UBE2F-204ENST00000409953 USP18Q9UMW8 372 aa8.65□□□□□ -1.02
UBE2F-204ENST00000409953 NLRC5Q86WI3 1866 aa8.64□□□□□ -1.03
UBE2F-204ENST00000409953 ZNF316A6NFI3 1004 aaPredicted RBP8.64□□□□□ -1.03
UBE2F-204ENST00000409953 SMPD1P17405 629 aa8.64□□□□□ -1.03
UBE2F-204ENST00000409953 CTNNB1P35222 781 aa8.64□□□□□ -1.03
UBE2F-204ENST00000409953 MECOMQ03112 1051 aa8.64□□□□□ -1.03
UBE2F-204ENST00000409953 IKBKEQ14164 716 aa8.64□□□□□ -1.03
UBE2F-204ENST00000409953 SOWAHCQ53LP3 525 aaPredicted RBP8.64□□□□□ -1.03
UBE2F-204ENST00000409953 ARMCX2Q7L311 632 aa8.64□□□□□ -1.03
UBE2F-204ENST00000409953 MYOCDQ8IZQ8 938 aa8.64□□□□□ -1.03
UBE2F-204ENST00000409953 EFHBQ8N7U6 833 aa8.64□□□□□ -1.03
UBE2F-204ENST00000409953 ZNF384Q8TF68 577 aa8.64□□□□□ -1.03
UBE2F-204ENST00000409953 SUSD6Q92537 303 aa8.64□□□□□ -1.03
UBE2F-204ENST00000409953 PPP2R3CQ969Q6 453 aa8.64□□□□□ -1.03
UBE2F-204ENST00000409953 YME1L1Q96TA2 773 aa8.64□□□□□ -1.03
UBE2F-204ENST00000409953 GNEQ9Y223 722 aaKnown RBP8.64□□□□□ -1.03
UBE2F-204ENST00000409953 CNOT1A5YKK6 2376 aaKnown RBP8.64□□□□□ -1.03
UBE2F-204ENST00000409953 FANCMQ8IYD8 2048 aa8.63□□□□□ -1.03
UBE2F-204ENST00000409953 MCM3APO60318 1980 aa8.63□□□□□ -1.03
UBE2F-204ENST00000409953 SRRM3A6NNA2 597 aaPredicted RBP8.63□□□□□ -1.03
UBE2F-204ENST00000409953 RBAK-RBAKDNI3L0D1 243 aa8.63□□□□□ -1.03
UBE2F-204ENST00000409953 SLC30A4O14863 429 aa8.63□□□□□ -1.03
UBE2F-204ENST00000409953 DYNC1LI2O43237 492 aaPredicted RBP8.63□□□□□ -1.03
UBE2F-204ENST00000409953 KINO60870 393 aaKnown RBP8.63□□□□□ -1.03
UBE2F-204ENST00000409953 GLP2RO95838 553 aa8.63□□□□□ -1.03
UBE2F-204ENST00000409953 CXCL10P02778 98 aa8.63□□□□□ -1.03
UBE2F-204ENST00000409953 NPR3P17342 541 aa8.63□□□□□ -1.03
UBE2F-204ENST00000409953 FKBP5Q13451 457 aaPredicted RBP8.63□□□□□ -1.03
UBE2F-204ENST00000409953 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.63□□□□□ -1.03
UBE2F-204ENST00000409953 MAGEB6Q8N7X4 407 aa8.63□□□□□ -1.03
UBE2F-204ENST00000409953 KDF1Q8NAX2 398 aaPredicted RBP8.63□□□□□ -1.03
UBE2F-204ENST00000409953 AFAP1L1Q8TED9 768 aa8.63□□□□□ -1.03
UBE2F-204ENST00000409953 PPP1R13LQ8WUF5 828 aa8.63□□□□□ -1.03
UBE2F-204ENST00000409953 DDX11Q96FC9 970 aa8.63□□□□□ -1.03
UBE2F-204ENST00000409953 HNRNPABQ99729 332 aaKnown RBP8.63□□□□□ -1.03
UBE2F-204ENST00000409953 C11orf84Q9BUA3 381 aaPredicted RBP8.63□□□□□ -1.03
UBE2F-204ENST00000409953 KATNBL1Q9H079 304 aa8.63□□□□□ -1.03
UBE2F-204ENST00000409953 ANKFY1Q9P2R3 1169 aa8.63□□□□□ -1.03
UBE2F-204ENST00000409953 PALD1Q9ULE6 856 aa8.63□□□□□ -1.03
UBE2F-204ENST00000409953 NOD1Q9Y239 953 aa8.63□□□□□ -1.03
UBE2F-204ENST00000409953 DNAJC25-GNG10A0A024R161 153 aa8.62□□□□□ -1.03
UBE2F-204ENST00000409953 GRM8O00222 908 aa8.62□□□□□ -1.03
UBE2F-204ENST00000409953 NBNO60934 754 aa8.62□□□□□ -1.03
UBE2F-204ENST00000409953 AMHP03971 560 aa8.62□□□□□ -1.03
UBE2F-204ENST00000409953 ZNF853P0CG23 659 aa8.62□□□□□ -1.03
UBE2F-204ENST00000409953 SP9P0CG40 484 aa8.62□□□□□ -1.03
UBE2F-204ENST00000409953 HOXB1P14653 301 aaPredicted RBP8.62□□□□□ -1.03
UBE2F-204ENST00000409953 COPB2P35606 906 aa8.62□□□□□ -1.03
UBE2F-204ENST00000409953 MCAMP43121 646 aa8.62□□□□□ -1.03
UBE2F-204ENST00000409953 PHKA1P46020 1223 aa8.62□□□□□ -1.03
UBE2F-204ENST00000409953 RBM25P49756 843 aaKnown RBP8.62□□□□□ -1.03
UBE2F-204ENST00000409953 FLIIQ13045 1269 aa8.62□□□□□ -1.03
UBE2F-204ENST00000409953 N4BP2L1Q5TBK1 243 aaPredicted RBP8.62□□□□□ -1.03
UBE2F-204ENST00000409953 SPTY2D1Q68D10 685 aaPredicted RBP8.62□□□□□ -1.03
UBE2F-204ENST00000409953 LRRC8DQ7L1W4 858 aa8.62□□□□□ -1.03
UBE2F-204ENST00000409953 MAPKAPK5Q8IW41 473 aa8.62□□□□□ -1.03
UBE2F-204ENST00000409953 ZNF710Q8N1W2 664 aa8.62□□□□□ -1.03
UBE2F-204ENST00000409953 CCDC155Q8N6L0 562 aa8.62□□□□□ -1.03
UBE2F-204ENST00000409953 NETO1Q8TDF5 533 aa8.62□□□□□ -1.03
UBE2F-204ENST00000409953 SH3RF3Q8TEJ3 882 aaPredicted RBP8.62□□□□□ -1.03
UBE2F-204ENST00000409953 SECISBP2LQ93073 1101 aaKnown RBP8.62□□□□□ -1.03
UBE2F-204ENST00000409953 MICAL3Q7RTP6 2002 aa8.62□□□□□ -1.03
UBE2F-204ENST00000409953 NBEAQ8NFP9 2946 aa8.61□□□□□ -1.03
UBE2F-204ENST00000409953 FLT1P17948 1338 aa8.61□□□□□ -1.03
UBE2F-204ENST00000409953 C5orf67F2Z3F1 127 aa8.61□□□□□ -1.03
UBE2F-204ENST00000409953 MMP1P03956 469 aa8.61□□□□□ -1.03
UBE2F-204ENST00000409953 HLA-DOAP06340 250 aa8.61□□□□□ -1.03
UBE2F-204ENST00000409953 ASGR2P07307 311 aa8.61□□□□□ -1.03
UBE2F-204ENST00000409953 SELPP16109 830 aa8.61□□□□□ -1.03
UBE2F-204ENST00000409953 STAT3P40763 770 aa8.61□□□□□ -1.03
UBE2F-204ENST00000409953 NRIP1P48552 1158 aa8.61□□□□□ -1.03
UBE2F-204ENST00000409953 ABCB5Q2M3G0 1257 aa8.61□□□□□ -1.03
UBE2F-204ENST00000409953 ARSIQ5FYB1 569 aa8.61□□□□□ -1.03
UBE2F-204ENST00000409953 ADGRD2Q7Z7M1 963 aa8.61□□□□□ -1.03
UBE2F-204ENST00000409953 CCDC144CPQ8IYA2 1237 aa8.61□□□□□ -1.03
UBE2F-204ENST00000409953 TSPYL6Q8N831 410 aa8.61□□□□□ -1.03
UBE2F-204ENST00000409953 KLHDC4Q8TBB5 520 aa8.61□□□□□ -1.03
UBE2F-204ENST00000409953 CAGE1Q8TC20 777 aa8.61□□□□□ -1.03
UBE2F-204ENST00000409953 SUCLG2Q96I99 432 aa8.61□□□□□ -1.03
UBE2F-204ENST00000409953 FGD4Q96M96 766 aa8.61□□□□□ -1.03
UBE2F-204ENST00000409953 ADAMTS8Q9UP79 889 aa8.61□□□□□ -1.03
UBE2F-204ENST00000409953 NR2E1Q9Y466 385 aa8.61□□□□□ -1.03
UBE2F-204ENST00000409953 DSPP15924 2871 aaKnown RBP8.61□□□□□ -1.03
UBE2F-204ENST00000409953 LOC400499M0QZD8 3231 aa8.6□□□□□ -1.03
UBE2F-204ENST00000409953 A0A1W2PRG0 241 aa8.6□□□□□ -1.03
UBE2F-204ENST00000409953 PARNO95453 639 aaKnown RBP8.6□□□□□ -1.03
UBE2F-204ENST00000409953 RB1P06400 928 aa8.6□□□□□ -1.03
UBE2F-204ENST00000409953 LDHCP07864 332 aa8.6□□□□□ -1.03
UBE2F-204ENST00000409953 TGM1P22735 817 aa8.6□□□□□ -1.03
UBE2F-204ENST00000409953 GSTO1P78417 241 aa8.6□□□□□ -1.03
UBE2F-204ENST00000409953 PURAQ00577 322 aaKnown RBP8.6□□□□□ -1.03
UBE2F-204ENST00000409953 RASGRF1Q13972 1273 aa8.6□□□□□ -1.03
UBE2F-204ENST00000409953 KIAA1755Q5JYT7 1200 aa8.6□□□□□ -1.03
UBE2F-204ENST00000409953 TMEM63BQ5T3F8 832 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms