RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 KIAA0355O15063 1070 aa20.55■□□□□ 0.88
LSM5-204ENST00000409909 DDAH1O94760 285 aa20.55■□□□□ 0.88
LSM5-204ENST00000409909 MRPL12P52815 198 aaKnown RBP20.55■□□□□ 0.88
LSM5-204ENST00000409909 RASEFQ8IZ41 740 aa20.55■□□□□ 0.88
LSM5-204ENST00000409909 TMTC2Q8N394 836 aa20.55■□□□□ 0.88
LSM5-204ENST00000409909 SCFD2Q8WU76 684 aa20.55■□□□□ 0.88
LSM5-204ENST00000409909 TMEM39AQ9NV64 488 aa20.55■□□□□ 0.88
LSM5-204ENST00000409909 GRIN2DO15399 1336 aa20.54■□□□□ 0.88
LSM5-204ENST00000409909 ARIH2O95376 493 aa20.54■□□□□ 0.88
LSM5-204ENST00000409909 LIFRP42702 1097 aa20.54■□□□□ 0.88
LSM5-204ENST00000409909 LRIT3Q3SXY7 679 aa20.54■□□□□ 0.88
LSM5-204ENST00000409909 NFXL1Q6ZNB6 911 aa20.54■□□□□ 0.88
LSM5-204ENST00000409909 SLC43A3Q8NBI5 491 aa20.54■□□□□ 0.88
LSM5-204ENST00000409909 PIBF1Q8WXW3 757 aa20.54■□□□□ 0.88
LSM5-204ENST00000409909 COPS5Q92905 334 aa20.54■□□□□ 0.88
LSM5-204ENST00000409909 IWS1Q96ST2 819 aa20.54■□□□□ 0.88
LSM5-204ENST00000409909 ZEB2O60315 1214 aa20.53■□□□□ 0.88
LSM5-204ENST00000409909 CABYRO75952 493 aa20.53■□□□□ 0.88
LSM5-204ENST00000409909 EIF2AK2P19525 551 aaKnown RBP20.53■□□□□ 0.88
LSM5-204ENST00000409909 HOXA13P31271 388 aaPredicted RBP20.53■□□□□ 0.88
LSM5-204ENST00000409909 PPP2R5BQ15173 497 aa20.53■□□□□ 0.88
LSM5-204ENST00000409909 TSGA10IPQ3SY00 556 aa20.53■□□□□ 0.88
LSM5-204ENST00000409909 RNF20Q5VTR2 975 aa20.53■□□□□ 0.88
LSM5-204ENST00000409909 ARHGEF16Q5VV41 709 aa20.53■□□□□ 0.88
LSM5-204ENST00000409909 CCDC62Q6P9F0 684 aa20.53■□□□□ 0.88
LSM5-204ENST00000409909 CTCFLQ8NI51 663 aaPredicted RBP20.53■□□□□ 0.88
LSM5-204ENST00000409909 PXMP2Q9NR77 195 aa20.53■□□□□ 0.88
LSM5-204ENST00000409909 TBX21Q9UL17 535 aa20.53■□□□□ 0.88
LSM5-204ENST00000409909 CCDC69A6NI79 296 aa20.52■□□□□ 0.88
LSM5-204ENST00000409909 PLEKHA8P1O95397 391 aa20.52■□□□□ 0.88
LSM5-204ENST00000409909 TXNP10599 105 aaKnown RBP20.52■□□□□ 0.88
LSM5-204ENST00000409909 RXRAP19793 462 aa20.52■□□□□ 0.88
LSM5-204ENST00000409909 PSMC6P62333 389 aa20.52■□□□□ 0.88
LSM5-204ENST00000409909 EXOSC10Q01780 885 aaKnown RBP20.52■□□□□ 0.88
LSM5-204ENST00000409909 ITGA7Q13683 1181 aa20.52■□□□□ 0.88
LSM5-204ENST00000409909 STXBP2Q15833 593 aa20.52■□□□□ 0.88
LSM5-204ENST00000409909 ADCK5Q3MIX3 580 aa20.52■□□□□ 0.88
LSM5-204ENST00000409909 RAB11FIP4Q86YS3 637 aa20.52■□□□□ 0.88
LSM5-204ENST00000409909 FAM126BQ8IXS8 530 aa20.52■□□□□ 0.88
LSM5-204ENST00000409909 SRBD1Q8N5C6 995 aaKnown RBP20.52■□□□□ 0.88
LSM5-204ENST00000409909 OR6J1Q8NGC5 347 aa20.52■□□□□ 0.88
LSM5-204ENST00000409909 NEK1Q96PY6 1258 aa20.52■□□□□ 0.88
LSM5-204ENST00000409909 SPZ1Q9BXG8 430 aa20.52■□□□□ 0.88
LSM5-204ENST00000409909 MAP3K20Q9NYL2 800 aaKnown RBP20.52■□□□□ 0.88
LSM5-204ENST00000409909 MROH7Q68CQ1 1323 aa20.52■□□□□ 0.87
LSM5-204ENST00000409909 NKRFO15226 690 aaKnown RBP eCLIP20.51■□□□□ 0.87
LSM5-204ENST00000409909 NEFLP07196 543 aa20.51■□□□□ 0.87
LSM5-204ENST00000409909 NR3C2P08235 984 aa20.51■□□□□ 0.87
LSM5-204ENST00000409909 RAG1P15918 1043 aa20.51■□□□□ 0.87
LSM5-204ENST00000409909 SMARCA1P28370 1054 aa20.51■□□□□ 0.87
LSM5-204ENST00000409909 KIF5BP33176 963 aa20.51■□□□□ 0.87
LSM5-204ENST00000409909 TRAF1Q13077 416 aa20.51■□□□□ 0.87
LSM5-204ENST00000409909 TTLL4Q14679 1199 aa20.51■□□□□ 0.87
LSM5-204ENST00000409909 C9orf50Q5SZB4 431 aa20.51■□□□□ 0.87
LSM5-204ENST00000409909 SEPT14Q6ZU15 432 aa20.51■□□□□ 0.87
LSM5-204ENST00000409909 CMTR1Q8N1G2 835 aaKnown RBP20.51■□□□□ 0.87
LSM5-204ENST00000409909 KIAA1217Q5T5P2 1943 aa20.51■□□□□ 0.87
LSM5-204ENST00000409909 A6NJR5 290 aa20.5■□□□□ 0.87
LSM5-204ENST00000409909 EIF3JO75822 258 aaKnown RBP20.5■□□□□ 0.87
LSM5-204ENST00000409909 CD4P01730 458 aa20.5■□□□□ 0.87
LSM5-204ENST00000409909 CPT1AP50416 773 aa20.5■□□□□ 0.87
LSM5-204ENST00000409909 EPHB4P54760 987 aa20.5■□□□□ 0.87
LSM5-204ENST00000409909 PURAQ00577 322 aaKnown RBP20.5■□□□□ 0.87
LSM5-204ENST00000409909 SHHQ15465 462 aa20.5■□□□□ 0.87
LSM5-204ENST00000409909 LY6KQ17RY6 165 aa20.5■□□□□ 0.87
LSM5-204ENST00000409909 SGMS1Q86VZ5 419 aa20.5■□□□□ 0.87
LSM5-204ENST00000409909 SAMD3Q8N6K7 520 aa20.5■□□□□ 0.87
LSM5-204ENST00000409909 TCEANC2Q96MN5 208 aa20.5■□□□□ 0.87
LSM5-204ENST00000409909 LZTS2Q9BRK4 669 aa20.5■□□□□ 0.87
LSM5-204ENST00000409909 PDCD2LQ9BRP1 358 aa20.5■□□□□ 0.87
LSM5-204ENST00000409909 SLC12A7Q9Y666 1083 aa20.5■□□□□ 0.87
LSM5-204ENST00000409909 GCOM1H8Y6P7 765 aaPredicted RBP20.49■□□□□ 0.87
LSM5-204ENST00000409909 TIMP1P01033 207 aa20.49■□□□□ 0.87
LSM5-204ENST00000409909 MYL3P08590 195 aa20.49■□□□□ 0.87
LSM5-204ENST00000409909 POLR2MP0CAP2 368 aa20.49■□□□□ 0.87
LSM5-204ENST00000409909 CALM1P0DP23 149 aa20.49■□□□□ 0.87
LSM5-204ENST00000409909 CALM2P0DP24 149 aa20.49■□□□□ 0.87
LSM5-204ENST00000409909 CALM3P0DP25 149 aa20.49■□□□□ 0.87
LSM5-204ENST00000409909 DHX32Q7L7V1 743 aaKnown RBP20.49■□□□□ 0.87
LSM5-204ENST00000409909 FANCBQ8NB91 859 aa20.49■□□□□ 0.87
LSM5-204ENST00000409909 IL31RAQ8NI17 732 aa20.49■□□□□ 0.87
LSM5-204ENST00000409909 RRP36Q96EU6 259 aaKnown RBP20.49■□□□□ 0.87
LSM5-204ENST00000409909 POLR3EQ9NVU0 708 aa20.49■□□□□ 0.87
LSM5-204ENST00000409909 RGS20O76081 388 aa20.48■□□□□ 0.87
LSM5-204ENST00000409909 GNAQP50148 359 aa20.48■□□□□ 0.87
LSM5-204ENST00000409909 VSIG10LQ86VR7 867 aa20.48■□□□□ 0.87
LSM5-204ENST00000409909 FCHSD1Q86WN1 690 aa20.48■□□□□ 0.87
LSM5-204ENST00000409909 KCNB2Q92953 911 aa20.48■□□□□ 0.87
LSM5-204ENST00000409909 TRPV6Q9H1D0 765 aa20.48■□□□□ 0.87
LSM5-204ENST00000409909 DDX41Q9UJV9 622 aaKnown RBP20.48■□□□□ 0.87
LSM5-204ENST00000409909 TLR3O15455 904 aaKnown RBP20.47■□□□□ 0.87
LSM5-204ENST00000409909 MYCLP12524 364 aaPredicted RBP20.47■□□□□ 0.87
LSM5-204ENST00000409909 ARHGAP1Q07960 439 aa20.47■□□□□ 0.87
LSM5-204ENST00000409909 PGM5Q15124 567 aa20.47■□□□□ 0.87
LSM5-204ENST00000409909 MTG1Q9BT17 334 aaPredicted RBP20.47■□□□□ 0.87
LSM5-204ENST00000409909 SEZ6LQ9BYH1 1024 aa20.47■□□□□ 0.87
LSM5-204ENST00000409909 BRPF3Q9ULD4 1205 aa20.47■□□□□ 0.87
LSM5-204ENST00000409909 COL6A3P12111 3177 aa20.47■□□□□ 0.87
LSM5-204ENST00000409909 hCG_1642624A0A1W2PR95 340 aa20.46■□□□□ 0.87
LSM5-204ENST00000409909 FPGSQ05932 587 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms