RNA–Protein interactions for RNA: ENST00000409886.3

RGPD3-202, Transcript of RANBP2-like and GRIP domain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RGPD3, Length 5,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3-202ENST00000409886 ZDHHC14Q8IZN3 488 aa3.57□□□□□ -1.84
RGPD3-202ENST00000409886 THOC1Q96FV9 657 aaKnown RBP3.57□□□□□ -1.84
RGPD3-202ENST00000409886 PAWRQ96IZ0 340 aaKnown RBP3.57□□□□□ -1.84
RGPD3-202ENST00000409886 KCNMB3Q9NPA1 279 aa3.57□□□□□ -1.84
RGPD3-202ENST00000409886 WDR3Q9UNX4 943 aaKnown RBP eCLIP3.57□□□□□ -1.84
RGPD3-202ENST00000409886 CELSR2Q9HCU4 2923 aa3.56□□□□□ -1.84
RGPD3-202ENST00000409886 BCRP11274 1271 aa3.56□□□□□ -1.84
RGPD3-202ENST00000409886 GJA5P36382 358 aa3.56□□□□□ -1.84
RGPD3-202ENST00000409886 SLC7A5Q01650 507 aa3.56□□□□□ -1.84
RGPD3-202ENST00000409886 TEX35Q5T0J7 233 aa3.56□□□□□ -1.84
RGPD3-202ENST00000409886 MAP3K21Q5TCX8 1036 aa3.56□□□□□ -1.84
RGPD3-202ENST00000409886 THEMIS2Q5TEJ8 643 aa3.56□□□□□ -1.84
RGPD3-202ENST00000409886 KCTD16Q68DU8 428 aa3.56□□□□□ -1.84
RGPD3-202ENST00000409886 IGSF22Q8N9C0 903 aa3.56□□□□□ -1.84
RGPD3-202ENST00000409886 LINC00301Q8NCQ3 95 aa3.56□□□□□ -1.84
RGPD3-202ENST00000409886 COG1Q8WTW3 980 aa3.56□□□□□ -1.84
RGPD3-202ENST00000409886 SUCLG2Q96I99 432 aa3.56□□□□□ -1.84
RGPD3-202ENST00000409886 JPH2Q9BR39 696 aaPredicted RBP3.56□□□□□ -1.84
RGPD3-202ENST00000409886 PUS3Q9BZE2 481 aaKnown RBP3.56□□□□□ -1.84
RGPD3-202ENST00000409886 NUP62CLQ9H1M0 184 aa3.56□□□□□ -1.84
RGPD3-202ENST00000409886 CLSTN2Q9H4D0 955 aa3.56□□□□□ -1.84
RGPD3-202ENST00000409886 CWC22Q9HCG8 908 aaKnown RBP3.56□□□□□ -1.84
RGPD3-202ENST00000409886 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.56□□□□□ -1.84
RGPD3-202ENST00000409886 CAPN6Q9Y6Q1 641 aa3.56□□□□□ -1.84
RGPD3-202ENST00000409886 SPDYE5A6NIY4 337 aa3.56□□□□□ -1.84
RGPD3-202ENST00000409886 EDIL3O43854 480 aa3.56□□□□□ -1.84
RGPD3-202ENST00000409886 CUTAO60888 179 aa3.56□□□□□ -1.84
RGPD3-202ENST00000409886 RAD17O75943 681 aa3.56□□□□□ -1.84
RGPD3-202ENST00000409886 NTSR2O95665 410 aa3.56□□□□□ -1.84
RGPD3-202ENST00000409886 ID4P47928 161 aa3.56□□□□□ -1.84
RGPD3-202ENST00000409886 TTLL12Q14166 644 aaPredicted RBP3.56□□□□□ -1.84
RGPD3-202ENST00000409886 TMC6Q7Z403 805 aa3.56□□□□□ -1.84
RGPD3-202ENST00000409886 CPNE8Q86YQ8 564 aa3.56□□□□□ -1.84
RGPD3-202ENST00000409886 ANKRD13CQ8N6S4 541 aa3.56□□□□□ -1.84
RGPD3-202ENST00000409886 BRI3BPQ8WY22 251 aa3.56□□□□□ -1.84
RGPD3-202ENST00000409886 OSBP2Q969R2 916 aa3.56□□□□□ -1.84
RGPD3-202ENST00000409886 PARK7Q99497 189 aaKnown RBP3.56□□□□□ -1.84
RGPD3-202ENST00000409886 GGT7Q9UJ14 662 aa3.56□□□□□ -1.84
RGPD3-202ENST00000409886 SONP18583 2426 aaKnown RBP3.56□□□□□ -1.84
RGPD3-202ENST00000409886 POTEB3A0JP26 581 aa3.56□□□□□ -1.84
RGPD3-202ENST00000409886 A8MUI8 341 aa3.56□□□□□ -1.84
RGPD3-202ENST00000409886 ADCY3O60266 1144 aa3.56□□□□□ -1.84
RGPD3-202ENST00000409886 RANBP6O60518 1105 aaKnown RBP3.56□□□□□ -1.84
RGPD3-202ENST00000409886 SHBGP04278 402 aa3.56□□□□□ -1.84
RGPD3-202ENST00000409886 CCT5P48643 541 aa3.56□□□□□ -1.84
RGPD3-202ENST00000409886 CORO7P57737 925 aa3.56□□□□□ -1.84
RGPD3-202ENST00000409886 SLC9C2Q5TAH2 1124 aa3.56□□□□□ -1.84
RGPD3-202ENST00000409886 POTEBQ6S5H4 581 aa3.56□□□□□ -1.84
RGPD3-202ENST00000409886 ZNF34Q8IZ26 560 aa3.56□□□□□ -1.84
RGPD3-202ENST00000409886 PDILTQ8N807 584 aa3.56□□□□□ -1.84
RGPD3-202ENST00000409886 TATDN2Q93075 761 aa3.56□□□□□ -1.84
RGPD3-202ENST00000409886 SNRKQ9NRH2 765 aa3.56□□□□□ -1.84
RGPD3-202ENST00000409886 KIAA1468Q9P260 1216 aa3.56□□□□□ -1.84
RGPD3-202ENST00000409886 KCNH4Q9UQ05 1017 aa3.56□□□□□ -1.84
RGPD3-202ENST00000409886 MRFAP1Q9Y605 127 aa3.56□□□□□ -1.84
RGPD3-202ENST00000409886 F8W031 263 aaPredicted RBP3.56□□□□□ -1.84
RGPD3-202ENST00000409886 TP73O15350 636 aa3.56□□□□□ -1.84
RGPD3-202ENST00000409886 PIAS1O75925 651 aa3.56□□□□□ -1.84
RGPD3-202ENST00000409886 SPATA31D3P0C874 917 aa3.56□□□□□ -1.84
RGPD3-202ENST00000409886 SLC5A1P13866 664 aa3.56□□□□□ -1.84
RGPD3-202ENST00000409886 ACTN2P35609 894 aa3.56□□□□□ -1.84
RGPD3-202ENST00000409886 NBL1P41271 181 aa3.56□□□□□ -1.84
RGPD3-202ENST00000409886 STX17P56962 302 aa3.56□□□□□ -1.84
RGPD3-202ENST00000409886 MDM2Q00987 491 aaPredicted RBP3.56□□□□□ -1.84
RGPD3-202ENST00000409886 PDCLQ13371 301 aa3.56□□□□□ -1.84
RGPD3-202ENST00000409886 ZC2HC1CQ53FD0 456 aaPredicted RBP3.56□□□□□ -1.84
RGPD3-202ENST00000409886 TTMPQ5BVD1 217 aa3.56□□□□□ -1.84
RGPD3-202ENST00000409886 SARM1Q6SZW1 724 aa3.56□□□□□ -1.84
RGPD3-202ENST00000409886 SPATA31D4Q6ZUB0 917 aa3.56□□□□□ -1.84
RGPD3-202ENST00000409886 TTC5Q8N0Z6 440 aa3.56□□□□□ -1.84
RGPD3-202ENST00000409886 OR2W6PQ8NHA6 318 aa3.56□□□□□ -1.84
RGPD3-202ENST00000409886 ZNF483Q8TF39 744 aaPredicted RBP3.56□□□□□ -1.84
RGPD3-202ENST00000409886 PIK3R5Q8WYR1 880 aa3.56□□□□□ -1.84
RGPD3-202ENST00000409886 MRFAP1L1Q96HT8 127 aa3.56□□□□□ -1.84
RGPD3-202ENST00000409886 ZNF594Q96JF6 807 aaPredicted RBP3.56□□□□□ -1.84
RGPD3-202ENST00000409886 TNMDQ9H2S6 317 aa3.56□□□□□ -1.84
RGPD3-202ENST00000409886 AGPAT5Q9NUQ2 364 aa3.56□□□□□ -1.84
RGPD3-202ENST00000409886 RIF1Q5UIP0 2472 aaKnown RBP3.56□□□□□ -1.84
RGPD3-202ENST00000409886 LRRC10BA6NIK2 292 aa3.55□□□□□ -1.84
RGPD3-202ENST00000409886 C19orf67A6NJJ6 358 aa3.55□□□□□ -1.84
RGPD3-202ENST00000409886 ZEB2O60315 1214 aa3.55□□□□□ -1.84
RGPD3-202ENST00000409886 GFRA3O60609 400 aa3.55□□□□□ -1.84
RGPD3-202ENST00000409886 PYGLP06737 847 aa3.55□□□□□ -1.84
RGPD3-202ENST00000409886 CSF1RP07333 972 aa3.55□□□□□ -1.84
RGPD3-202ENST00000409886 SEMA3FQ13275 785 aa3.55□□□□□ -1.84
RGPD3-202ENST00000409886 SNAPC2Q13487 334 aa3.55□□□□□ -1.84
RGPD3-202ENST00000409886 ST3GAL2Q16842 350 aa3.55□□□□□ -1.84
RGPD3-202ENST00000409886 OLFM4Q6UX06 510 aa3.55□□□□□ -1.84
RGPD3-202ENST00000409886 RPAP2Q8IXW5 612 aaPredicted RBP3.55□□□□□ -1.84
RGPD3-202ENST00000409886 SMARCC2Q8TAQ2 1214 aa3.55□□□□□ -1.84
RGPD3-202ENST00000409886 OXER1Q8TDS5 423 aa3.55□□□□□ -1.84
RGPD3-202ENST00000409886 CPLX3Q8WVH0 158 aa3.55□□□□□ -1.84
RGPD3-202ENST00000409886 ZKSCAN4Q969J2 545 aaPredicted RBP3.55□□□□□ -1.84
RGPD3-202ENST00000409886 NEUROG2Q9H2A3 272 aa3.55□□□□□ -1.84
RGPD3-202ENST00000409886 VPS18Q9P253 973 aa3.55□□□□□ -1.84
RGPD3-202ENST00000409886 NIP7Q9Y221 180 aaKnown RBP eCLIP3.55□□□□□ -1.84
RGPD3-202ENST00000409886 OTOGQ6ZRI0 2925 aa3.55□□□□□ -1.84
RGPD3-202ENST00000409886 CKAP5Q14008 2032 aa3.55□□□□□ -1.84
RGPD3-202ENST00000409886 NCOR1O75376 2440 aa3.55□□□□□ -1.84
RGPD3-202ENST00000409886 PFASO15067 1338 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms