RNA–Protein interactions for RNA: ENST00000409766.7

USP39-204, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-204ENST00000409766 SNAP25P60880 206 aa22.56■■□□□ 1.2
USP39-204ENST00000409766 RBL2Q08999 1139 aa22.56■■□□□ 1.2
USP39-204ENST00000409766 STK4Q13043 487 aa22.56■■□□□ 1.2
USP39-204ENST00000409766 TTI2Q6NXR4 508 aa22.56■■□□□ 1.2
USP39-204ENST00000409766 SNX29Q8TEQ0 813 aa22.56■■□□□ 1.2
USP39-204ENST00000409766 LARP4BQ92615 738 aaKnown RBP22.56■■□□□ 1.2
USP39-204ENST00000409766 CDK5RAP3Q96JB5 506 aa22.56■■□□□ 1.2
USP39-204ENST00000409766 ZNRF3Q9ULT6 936 aa22.56■■□□□ 1.2
USP39-204ENST00000409766 CYP3A7-CYP3A51PA0A087WV96 503 aa22.55■■□□□ 1.2
USP39-204ENST00000409766 CYP3A7P24462 503 aa22.55■■□□□ 1.2
USP39-204ENST00000409766 RBM10P98175 930 aaKnown RBP22.55■■□□□ 1.2
USP39-204ENST00000409766 AP3B2Q13367 1082 aa22.55■■□□□ 1.2
USP39-204ENST00000409766 TMEM119Q4V9L6 283 aa22.55■■□□□ 1.2
USP39-204ENST00000409766 PPFIBP1Q86W92 1011 aa22.55■■□□□ 1.2
USP39-204ENST00000409766 FBXO11Q86XK2 927 aa22.55■■□□□ 1.2
USP39-204ENST00000409766 KIF18AQ8NI77 898 aa22.55■■□□□ 1.2
USP39-204ENST00000409766 CRYGNQ8WXF5 182 aa22.55■■□□□ 1.2
USP39-204ENST00000409766 VPS16Q9H269 839 aa22.55■■□□□ 1.2
USP39-204ENST00000409766 THAP9Q9H5L6 903 aa22.55■■□□□ 1.2
USP39-204ENST00000409766 IKQ13123 557 aaPredicted RBP22.55■■□□□ 1.2
USP39-204ENST00000409766 MCM6Q14566 821 aa22.55■■□□□ 1.2
USP39-204ENST00000409766 COBLL1Q53SF7 1204 aa22.55■■□□□ 1.2
USP39-204ENST00000409766 FKBP1CQ5VVH2 108 aa22.55■■□□□ 1.2
USP39-204ENST00000409766 REXO1L1PQ8IX06 675 aa22.55■■□□□ 1.2
USP39-204ENST00000409766 RAD54LQ92698 747 aa22.55■■□□□ 1.2
USP39-204ENST00000409766 MBOAT7Q96N66 472 aa22.55■■□□□ 1.2
USP39-204ENST00000409766 P2RX7Q99572 595 aaKnown RBP22.55■■□□□ 1.2
USP39-204ENST00000409766 TAB2Q9NYJ8 693 aa22.55■■□□□ 1.2
USP39-204ENST00000409766 PCDHA12Q9UN75 941 aa22.55■■□□□ 1.2
USP39-204ENST00000409766 MYMKA6NI61 221 aa22.54■■□□□ 1.2
USP39-204ENST00000409766 TUBB4AP04350 444 aa22.54■■□□□ 1.2
USP39-204ENST00000409766 MCTP2Q6DN12 878 aa22.54■■□□□ 1.2
USP39-204ENST00000409766 MTMR14Q8NCE2 650 aa22.54■■□□□ 1.2
USP39-204ENST00000409766 AGBL3Q8NEM8 1001 aa22.54■■□□□ 1.2
USP39-204ENST00000409766 GJA10Q969M2 543 aa22.54■■□□□ 1.2
USP39-204ENST00000409766 FCER1AP12319 257 aa22.53■■□□□ 1.2
USP39-204ENST00000409766 PPP1R2P41236 205 aa22.53■■□□□ 1.2
USP39-204ENST00000409766 ECE1P42892 770 aa22.53■■□□□ 1.2
USP39-204ENST00000409766 MMP14P50281 582 aa22.53■■□□□ 1.2
USP39-204ENST00000409766 CNNM4Q6P4Q7 775 aa22.53■■□□□ 1.2
USP39-204ENST00000409766 MOXD1Q6UVY6 613 aa22.53■■□□□ 1.2
USP39-204ENST00000409766 NIM1KQ8IY84 436 aa22.53■■□□□ 1.2
USP39-204ENST00000409766 TRIM47Q96LD4 638 aa22.53■■□□□ 1.2
USP39-204ENST00000409766 DUSP9Q99956 384 aaKnown RBP22.53■■□□□ 1.2
USP39-204ENST00000409766 ARHGEF10LQ9HCE6 1279 aa22.53■■□□□ 1.2
USP39-204ENST00000409766 KCNMB3Q9NPA1 279 aa22.53■■□□□ 1.2
USP39-204ENST00000409766 PVALEFA0A1B0GWK0 134 aa22.53■■□□□ 1.2
USP39-204ENST00000409766 ZSCAN12O43309 604 aa22.53■■□□□ 1.2
USP39-204ENST00000409766 GYPCP04921 128 aa22.53■■□□□ 1.2
USP39-204ENST00000409766 CCNE1P24864 410 aa22.53■■□□□ 1.2
USP39-204ENST00000409766 EEF1GP26641 437 aaKnown RBP22.53■■□□□ 1.2
USP39-204ENST00000409766 USH1GQ495M9 461 aa22.53■■□□□ 1.2
USP39-204ENST00000409766 KCNK18Q7Z418 384 aa22.53■■□□□ 1.2
USP39-204ENST00000409766 SPICE1Q8N0Z3 855 aa22.53■■□□□ 1.2
USP39-204ENST00000409766 P2RX5Q93086 422 aa22.53■■□□□ 1.2
USP39-204ENST00000409766 SRRTQ9BXP5 876 aaKnown RBP22.53■■□□□ 1.2
USP39-204ENST00000409766 PPP2R2CQ9Y2T4 447 aa22.53■■□□□ 1.2
USP39-204ENST00000409766 TMX2Q9Y320 296 aa22.53■■□□□ 1.2
USP39-204ENST00000409766 MARCH6O60337 910 aa22.52■■□□□ 1.2
USP39-204ENST00000409766 ECM1Q16610 540 aa22.52■■□□□ 1.2
USP39-204ENST00000409766 UNC13DQ70J99 1090 aa22.52■■□□□ 1.2
USP39-204ENST00000409766 KIAA0895Q8NCT3 520 aa22.52■■□□□ 1.2
USP39-204ENST00000409766 ACER1Q8TDN7 264 aa22.52■■□□□ 1.2
USP39-204ENST00000409766 NOC3LQ8WTT2 800 aaKnown RBP22.52■■□□□ 1.2
USP39-204ENST00000409766 ZBTB21Q9ULJ3 1066 aa22.52■■□□□ 1.2
USP39-204ENST00000409766 PRR12Q9ULL5 1215 aa22.52■■□□□ 1.2
USP39-204ENST00000409766 BICDL2A1A5D9 508 aa22.52■■□□□ 1.19
USP39-204ENST00000409766 TBC1D12O60347 775 aa22.52■■□□□ 1.19
USP39-204ENST00000409766 MFAP3LO75121 409 aa22.52■■□□□ 1.19
USP39-204ENST00000409766 ARHGAP4P98171 946 aa22.52■■□□□ 1.19
USP39-204ENST00000409766 KIAA1755Q5JYT7 1200 aa22.52■■□□□ 1.19
USP39-204ENST00000409766 HYIQ5T013 277 aa22.52■■□□□ 1.19
USP39-204ENST00000409766 CREBRFQ8IUR6 639 aa22.52■■□□□ 1.19
USP39-204ENST00000409766 CPLX3Q8WVH0 158 aa22.52■■□□□ 1.19
USP39-204ENST00000409766 VEZTQ9HBM0 779 aa22.52■■□□□ 1.19
USP39-204ENST00000409766 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP22.52■■□□□ 1.197e-6■■□□□ 12.1
USP39-204ENST00000409766 OPLAHO14841 1288 aa22.51■■□□□ 1.19
USP39-204ENST00000409766 CASP14P31944 242 aa22.51■■□□□ 1.19
USP39-204ENST00000409766 FAM83AQ86UY5 434 aa22.51■■□□□ 1.19
USP39-204ENST00000409766 NAA15Q9BXJ9 866 aaKnown RBP22.51■■□□□ 1.19
USP39-204ENST00000409766 FXR1P51114 621 aaKnown RBP eCLIP22.5■■□□□ 1.19
USP39-204ENST00000409766 STAT2P52630 851 aa22.5■■□□□ 1.19
USP39-204ENST00000409766 ETF1P62495 437 aaKnown RBP22.5■■□□□ 1.19
USP39-204ENST00000409766 CXCL9Q07325 125 aa22.5■■□□□ 1.19
USP39-204ENST00000409766 ANKRD40Q6AI12 368 aa22.5■■□□□ 1.19
USP39-204ENST00000409766 TRIM65Q6PJ69 517 aa22.5■■□□□ 1.19
USP39-204ENST00000409766 SYT10Q6XYQ8 523 aa22.5■■□□□ 1.19
USP39-204ENST00000409766 TOGARAM2Q6ZUX3 1019 aa22.5■■□□□ 1.19
USP39-204ENST00000409766 CNGA4Q8IV77 575 aa22.5■■□□□ 1.19
USP39-204ENST00000409766 CDAN1Q8IWY9 1227 aa22.5■■□□□ 1.19
USP39-204ENST00000409766 CSGALNACT2Q8N6G5 542 aa22.5■■□□□ 1.19
USP39-204ENST00000409766 HPS3Q969F9 1004 aa22.5■■□□□ 1.19
USP39-204ENST00000409766 ZBED3Q96IU2 234 aaPredicted RBP22.5■■□□□ 1.19
USP39-204ENST00000409766 LRRC27Q9C0I9 530 aa22.5■■□□□ 1.19
USP39-204ENST00000409766 TMEM39BQ9GZU3 492 aa22.5■■□□□ 1.19
USP39-204ENST00000409766 SMCHD1A6NHR9 2005 aa22.5■■□□□ 1.19
USP39-204ENST00000409766 ZBTB7AO95365 584 aa22.5■■□□□ 1.19
USP39-204ENST00000409766 FOSP01100 380 aaPredicted RBP22.5■■□□□ 1.19
USP39-204ENST00000409766 DYMQ7RTS9 669 aa22.5■■□□□ 1.19
USP39-204ENST00000409766 ZNF710Q8N1W2 664 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms