RNA–Protein interactions for RNA: ENST00000409460.5

VWA3B-201, Transcript of von Willebrand factor A domain containing 3B, humanhuman

TSL 1 (best)

Gene VWA3B, Length 4,844 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VWA3B-201ENST00000409460 UPF2Q9HAU5 1272 aaKnown RBP10.09□□□□□ -0.79
VWA3B-201ENST00000409460 ZNF215Q9UL58 517 aaPredicted RBP10.09□□□□□ -0.79
VWA3B-201ENST00000409460 NAV1Q8NEY1 1877 aa10.08□□□□□ -0.8
VWA3B-201ENST00000409460 DNAJB2P25686 324 aa10.08□□□□□ -0.8
VWA3B-201ENST00000409460 SIRT2Q8IXJ6 389 aa10.08□□□□□ -0.8
VWA3B-201ENST00000409460 MYLIPQ8WY64 445 aa10.08□□□□□ -0.8
VWA3B-201ENST00000409460 RPLP2P05387 115 aaKnown RBP10.08□□□□□ -0.8
VWA3B-201ENST00000409460 NMIQ13287 307 aaPredicted RBP10.08□□□□□ -0.8
VWA3B-201ENST00000409460 CHST3Q7LGC8 479 aa10.08□□□□□ -0.8
VWA3B-201ENST00000409460 PNMA1Q8ND90 353 aa10.08□□□□□ -0.8
VWA3B-201ENST00000409460 SMARCC2Q8TAQ2 1214 aa10.08□□□□□ -0.8
VWA3B-201ENST00000409460 M0QZ92 97 aa10.08□□□□□ -0.8
VWA3B-201ENST00000409460 HSPD1P10809 573 aaKnown RBP10.08□□□□□ -0.8
VWA3B-201ENST00000409460 CCND2P30279 289 aa10.08□□□□□ -0.8
VWA3B-201ENST00000409460 LAMC2Q13753 1193 aa10.08□□□□□ -0.8
VWA3B-201ENST00000409460 DGKDQ16760 1214 aa10.08□□□□□ -0.8
VWA3B-201ENST00000409460 TJAP1Q5JTD0 557 aa10.08□□□□□ -0.8
VWA3B-201ENST00000409460 FBXO16Q8IX29 292 aaPredicted RBP10.08□□□□□ -0.8
VWA3B-201ENST00000409460 TMTC2Q8N394 836 aa10.08□□□□□ -0.8
VWA3B-201ENST00000409460 FAM133AQ8N9E0 248 aa10.08□□□□□ -0.8
VWA3B-201ENST00000409460 TMEM47Q9BQJ4 181 aa10.08□□□□□ -0.8
VWA3B-201ENST00000409460 PRO3102Q9H379 93 aa10.08□□□□□ -0.8
VWA3B-201ENST00000409460 MAP3K20Q9NYL2 800 aaKnown RBP10.08□□□□□ -0.8
VWA3B-201ENST00000409460 CCDC69A6NI79 296 aa10.08□□□□□ -0.8
VWA3B-201ENST00000409460 ALDH5A1P51649 535 aaPredicted RBP10.08□□□□□ -0.8
VWA3B-201ENST00000409460 SEPT14Q6ZU15 432 aa10.08□□□□□ -0.8
VWA3B-201ENST00000409460 TNKSO95271 1327 aa10.07□□□□□ -0.8
VWA3B-201ENST00000409460 GCOM1H8Y6P7 765 aaPredicted RBP10.07□□□□□ -0.8
VWA3B-201ENST00000409460 IFIT3O14879 490 aaKnown RBP10.07□□□□□ -0.8
VWA3B-201ENST00000409460 CFBP00751 764 aa10.07□□□□□ -0.8
VWA3B-201ENST00000409460 POLR2MP0CAP2 368 aa10.07□□□□□ -0.8
VWA3B-201ENST00000409460 MYCLP12524 364 aaPredicted RBP10.07□□□□□ -0.8
VWA3B-201ENST00000409460 ATP2A2P16615 1042 aaKnown RBP10.07□□□□□ -0.8
VWA3B-201ENST00000409460 BEX3Q00994 111 aa10.07□□□□□ -0.8
VWA3B-201ENST00000409460 CWC27Q6UX04 472 aaKnown RBP10.07□□□□□ -0.8
VWA3B-201ENST00000409460 CHD1LQ86WJ1 897 aa10.07□□□□□ -0.8
VWA3B-201ENST00000409460 LZTS2Q9BRK4 669 aa10.07□□□□□ -0.8
VWA3B-201ENST00000409460 ZMYM6O95789 1325 aa10.07□□□□□ -0.8
VWA3B-201ENST00000409460 SOX1O00570 391 aaPredicted RBP10.07□□□□□ -0.8
VWA3B-201ENST00000409460 AKAP17AQ02040 695 aaKnown RBP10.07□□□□□ -0.8
VWA3B-201ENST00000409460 KLHDC9Q8NEP7 349 aa10.07□□□□□ -0.8
VWA3B-201ENST00000409460 EPB41L4AQ9HCS5 686 aaPredicted RBP10.07□□□□□ -0.8
VWA3B-201ENST00000409460 TAL1P17542 331 aaPredicted RBP10.07□□□□□ -0.8
VWA3B-201ENST00000409460 CDC37Q16543 378 aaPredicted RBP10.07□□□□□ -0.8
VWA3B-201ENST00000409460 PTPROQ16827 1216 aa10.07□□□□□ -0.8
VWA3B-201ENST00000409460 ZNF365Q70YC5 407 aa10.07□□□□□ -0.8
VWA3B-201ENST00000409460 GIMAP8Q8ND71 665 aaPredicted RBP10.07□□□□□ -0.8
VWA3B-201ENST00000409460 CDHR1Q96JP9 859 aa10.07□□□□□ -0.8
VWA3B-201ENST00000409460 CYP39A1Q9NYL5 469 aa10.07□□□□□ -0.8
VWA3B-201ENST00000409460 ATAD5Q96QE3 1844 aa10.07□□□□□ -0.8
VWA3B-201ENST00000409460 KDM4AO75164 1064 aa10.07□□□□□ -0.8
VWA3B-201ENST00000409460 ADAMTS4O75173 837 aa10.07□□□□□ -0.8
VWA3B-201ENST00000409460 SNAI1O95863 264 aaPredicted RBP10.07□□□□□ -0.8
VWA3B-201ENST00000409460 SLC16A2P36021 539 aa10.07□□□□□ -0.8
VWA3B-201ENST00000409460 ODR4Q5SWX8 454 aa10.07□□□□□ -0.8
VWA3B-201ENST00000409460 PRR29P0C7W0 189 aa10.06□□□□□ -0.8
VWA3B-201ENST00000409460 CCL23P55773 120 aa10.06□□□□□ -0.8
VWA3B-201ENST00000409460 MRPS5P82675 430 aaKnown RBP10.06□□□□□ -0.8
VWA3B-201ENST00000409460 CNTN2Q02246 1040 aa10.06□□□□□ -0.8
VWA3B-201ENST00000409460 WTAPQ15007 396 aa10.06□□□□□ -0.8
VWA3B-201ENST00000409460 RMDN3Q96TC7 470 aa10.06□□□□□ -0.8
VWA3B-201ENST00000409460 DSCC1Q9BVC3 393 aa10.06□□□□□ -0.8
VWA3B-201ENST00000409460 RANBP17Q9H2T7 1088 aaKnown RBP10.06□□□□□ -0.8
VWA3B-201ENST00000409460 PCDHA11Q9Y5I1 949 aa10.06□□□□□ -0.8
VWA3B-201ENST00000409460 IGKV6D-41A0A0C4DH26 115 aa10.06□□□□□ -0.8
VWA3B-201ENST00000409460 CALM1P0DP23 149 aa10.06□□□□□ -0.8
VWA3B-201ENST00000409460 CALM2P0DP24 149 aa10.06□□□□□ -0.8
VWA3B-201ENST00000409460 CALM3P0DP25 149 aa10.06□□□□□ -0.8
VWA3B-201ENST00000409460 ZNF543Q08ER8 600 aa10.06□□□□□ -0.8
VWA3B-201ENST00000409460 NCOA7Q8NI08 942 aa10.06□□□□□ -0.8
VWA3B-201ENST00000409460 RRP36Q96EU6 259 aaKnown RBP10.06□□□□□ -0.8
VWA3B-201ENST00000409460 ZSCAN10Q96SZ4 725 aaPredicted RBP10.06□□□□□ -0.8
VWA3B-201ENST00000409460 FGAP02671 866 aa10.06□□□□□ -0.8
VWA3B-201ENST00000409460 AMHP03971 560 aa10.06□□□□□ -0.8
VWA3B-201ENST00000409460 NFRKBQ6P4R8 1299 aa10.06□□□□□ -0.8
VWA3B-201ENST00000409460 DEFB128Q7Z7B8 93 aa10.06□□□□□ -0.8
VWA3B-201ENST00000409460 DNAJC25-GNG10A0A024R161 153 aa10.05□□□□□ -0.8
VWA3B-201ENST00000409460 CLGNO14967 610 aa10.05□□□□□ -0.8
VWA3B-201ENST00000409460 BAIAP3O94812 1187 aa10.05□□□□□ -0.8
VWA3B-201ENST00000409460 SDSP20132 328 aa10.05□□□□□ -0.8
VWA3B-201ENST00000409460 CYP2C18P33260 490 aa10.05□□□□□ -0.8
VWA3B-201ENST00000409460 REPS2Q8NFH8 660 aa10.05□□□□□ -0.8
VWA3B-201ENST00000409460 PHOSPHO2Q8TCD6 241 aa10.05□□□□□ -0.8
VWA3B-201ENST00000409460 SEC62Q99442 399 aaKnown RBP10.05□□□□□ -0.8
VWA3B-201ENST00000409460 NEDD9Q14511 834 aa10.05□□□□□ -0.8
VWA3B-201ENST00000409460 BTNL9Q6UXG8 535 aa10.05□□□□□ -0.8
VWA3B-201ENST00000409460 AFAP1L1Q8TED9 768 aa10.05□□□□□ -0.8
VWA3B-201ENST00000409460 HERVK_113Q902F9 699 aa10.05□□□□□ -0.8
VWA3B-201ENST00000409460 EMSYQ7Z589 1322 aa10.05□□□□□ -0.8
VWA3B-201ENST00000409460 C20orf194Q5TEA3 1177 aa10.05□□□□□ -0.8
VWA3B-201ENST00000409460 ALG1Q9BT22 464 aa10.05□□□□□ -0.8
VWA3B-201ENST00000409460 GLT8D2Q9H1C3 349 aa10.05□□□□□ -0.8
VWA3B-201ENST00000409460 TRIM43BA6NCK2 446 aa10.05□□□□□ -0.8
VWA3B-201ENST00000409460 CSF2RAP15509 400 aa10.05□□□□□ -0.8
VWA3B-201ENST00000409460 IKBKEQ14164 716 aa10.05□□□□□ -0.8
VWA3B-201ENST00000409460 SLFNL1Q499Z3 407 aa10.05□□□□□ -0.8
VWA3B-201ENST00000409460 KIAA1755Q5JYT7 1200 aa10.05□□□□□ -0.8
VWA3B-201ENST00000409460 OTOP2Q7RTS6 562 aa10.05□□□□□ -0.8
VWA3B-201ENST00000409460 HOMER1Q86YM7 354 aa10.05□□□□□ -0.8
VWA3B-201ENST00000409460 SEPT8Q92599 483 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms