RNA–Protein interactions for RNA: ENST00000409458.3

GPNMB-203, Transcript of glycoprotein nmb, humanhuman

TSL 1 (best) BASIC

Gene GPNMB, Length 1,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-203ENST00000409458 HAS1Q92839 578 aa15.9■□□□□ 0.14
GPNMB-203ENST00000409458 AK8Q96MA6 479 aa15.9■□□□□ 0.14
GPNMB-203ENST00000409458 DNAJC25Q9H1X3 360 aa15.9■□□□□ 0.14
GPNMB-203ENST00000409458 RRAGCQ9HB90 399 aa15.9■□□□□ 0.14
GPNMB-203ENST00000409458 HOMER2Q9NSB8 354 aa15.9■□□□□ 0.14
GPNMB-203ENST00000409458 ADAMTS5Q9UNA0 930 aa15.9■□□□□ 0.14
GPNMB-203ENST00000409458 A0A0G2JLL6 359 aaPredicted RBP15.89■□□□□ 0.13
GPNMB-203ENST00000409458 SPDYE16A6NNV3 312 aaPredicted RBP15.89■□□□□ 0.13
GPNMB-203ENST00000409458 FXR2P51116 673 aaKnown RBP eCLIP15.89■□□□□ 0.13
GPNMB-203ENST00000409458 PRRT2Q7Z6L0 340 aaPredicted RBP15.89■□□□□ 0.13
GPNMB-203ENST00000409458 IGSF22Q8N9C0 903 aa15.89■□□□□ 0.13
GPNMB-203ENST00000409458 FAM200AQ8TCP9 573 aa15.89■□□□□ 0.13
GPNMB-203ENST00000409458 GJA10Q969M2 543 aa15.89■□□□□ 0.13
GPNMB-203ENST00000409458 LENG9Q96B70 501 aa15.89■□□□□ 0.13
GPNMB-203ENST00000409458 CCSER1Q9C0I3 900 aa15.89■□□□□ 0.13
GPNMB-203ENST00000409458 DISC1Q9NRI5 854 aa15.89■□□□□ 0.13
GPNMB-203ENST00000409458 TUBE1Q9UJT0 475 aa15.89■□□□□ 0.13
GPNMB-203ENST00000409458 FAM86B1E9PN63 330 aa15.89■□□□□ 0.13
GPNMB-203ENST00000409458 BIN1O00499 593 aa15.89■□□□□ 0.13
GPNMB-203ENST00000409458 CYP3A4P08684 503 aa15.89■□□□□ 0.13
GPNMB-203ENST00000409458 FAM86B2P0C5J1 330 aa15.89■□□□□ 0.13
GPNMB-203ENST00000409458 SLFN14P0C7P3 912 aa15.89■□□□□ 0.13
GPNMB-203ENST00000409458 CIITAP33076 1130 aa15.89■□□□□ 0.13
GPNMB-203ENST00000409458 GHRHRQ02643 423 aa15.89■□□□□ 0.13
GPNMB-203ENST00000409458 Q4G0T1 1027 aa15.89■□□□□ 0.13
GPNMB-203ENST00000409458 PDXDC2PQ6P474 469 aa15.89■□□□□ 0.13
GPNMB-203ENST00000409458 SH3RF1Q7Z6J0 888 aa15.89■□□□□ 0.13
GPNMB-203ENST00000409458 CEP57L1Q8IYX8 460 aa15.89■□□□□ 0.13
GPNMB-203ENST00000409458 PYM1Q9BRP8 204 aaKnown RBP15.89■□□□□ 0.13
GPNMB-203ENST00000409458 ZNF408Q9H9D4 720 aa15.89■□□□□ 0.13
GPNMB-203ENST00000409458 KCNMB3Q9NPA1 279 aa15.89■□□□□ 0.13
GPNMB-203ENST00000409458 COL20A1Q9P218 1284 aa15.89■□□□□ 0.13
GPNMB-203ENST00000409458 USP25Q9UHP3 1055 aa15.89■□□□□ 0.13
GPNMB-203ENST00000409458 HOOK1Q9UJC3 728 aaKnown RBP15.89■□□□□ 0.13
GPNMB-203ENST00000409458 PNMA2Q9UL42 364 aa15.89■□□□□ 0.13
GPNMB-203ENST00000409458 ZNF214Q9UL59 606 aaPredicted RBP15.89■□□□□ 0.13
GPNMB-203ENST00000409458 MYPNQ86TC9 1320 aa15.88■□□□□ 0.13
GPNMB-203ENST00000409458 POTEMA6NI47 508 aa15.88■□□□□ 0.13
GPNMB-203ENST00000409458 UBA7P41226 1012 aa15.88■□□□□ 0.13
GPNMB-203ENST00000409458 PPIL2Q13356 520 aa15.88■□□□□ 0.13
GPNMB-203ENST00000409458 TMEM132BQ14DG7 1078 aa15.88■□□□□ 0.13
GPNMB-203ENST00000409458 TMEM266Q2M3C6 531 aa15.88■□□□□ 0.13
GPNMB-203ENST00000409458 PRR16Q569H4 304 aa15.88■□□□□ 0.13
GPNMB-203ENST00000409458 LDLRAD1Q5T700 205 aa15.88■□□□□ 0.13
GPNMB-203ENST00000409458 KANK3Q6NY19 840 aa15.88■□□□□ 0.13
GPNMB-203ENST00000409458 GADL1Q6ZQY3 521 aa15.88■□□□□ 0.13
GPNMB-203ENST00000409458 CABP7Q86V35 215 aa15.88■□□□□ 0.13
GPNMB-203ENST00000409458 IQUBQ8NA54 791 aa15.88■□□□□ 0.13
GPNMB-203ENST00000409458 OPTNQ96CV9 577 aa15.88■□□□□ 0.13
GPNMB-203ENST00000409458 PAGE5Q96GU1 130 aa15.88■□□□□ 0.13
GPNMB-203ENST00000409458 UIMC1Q96RL1 719 aa15.88■□□□□ 0.13
GPNMB-203ENST00000409458 MMTAG2Q9BU76 263 aaKnown RBP15.88■□□□□ 0.13
GPNMB-203ENST00000409458 TTC12Q9H892 705 aaPredicted RBP15.88■□□□□ 0.13
GPNMB-203ENST00000409458 CBX8Q9HC52 389 aa15.88■□□□□ 0.13
GPNMB-203ENST00000409458 ANO10Q9NW15 660 aa15.88■□□□□ 0.13
GPNMB-203ENST00000409458 KCNH4Q9UQ05 1017 aa15.88■□□□□ 0.13
GPNMB-203ENST00000409458 RIPK3Q9Y572 518 aa15.88■□□□□ 0.13
GPNMB-203ENST00000409458 PCDHA5Q9Y5H7 936 aa15.88■□□□□ 0.13
GPNMB-203ENST00000409458 CXCL11O14625 94 aa15.87■□□□□ 0.13
GPNMB-203ENST00000409458 STAT6P42226 847 aa15.87■□□□□ 0.13
GPNMB-203ENST00000409458 AFMP43652 599 aa15.87■□□□□ 0.13
GPNMB-203ENST00000409458 OAZ1P54368 228 aa15.87■□□□□ 0.13
GPNMB-203ENST00000409458 UBXN2AP68543 259 aa15.87■□□□□ 0.13
GPNMB-203ENST00000409458 DPCR1Q3MIW9 517 aa15.87■□□□□ 0.13
GPNMB-203ENST00000409458 SNRNP48Q6IEG0 339 aaKnown RBP15.87■□□□□ 0.13
GPNMB-203ENST00000409458 MCF2L2Q86YR7 1114 aa15.87■□□□□ 0.13
GPNMB-203ENST00000409458 PROCA1Q8NCQ7 364 aaPredicted RBP15.87■□□□□ 0.13
GPNMB-203ENST00000409458 ETNPPLQ8TBG4 499 aa15.87■□□□□ 0.13
GPNMB-203ENST00000409458 LRRC15Q8TF66 581 aa15.87■□□□□ 0.13
GPNMB-203ENST00000409458 TRERF1Q96PN7 1200 aa15.87■□□□□ 0.13
GPNMB-203ENST00000409458 EHMT1Q9H9B1 1298 aa15.87■□□□□ 0.13
GPNMB-203ENST00000409458 RPTORQ8N122 1335 aa15.87■□□□□ 0.13
GPNMB-203ENST00000409458 GJA5P36382 358 aa15.86■□□□□ 0.13
GPNMB-203ENST00000409458 NLRP12P59046 1061 aa15.86■□□□□ 0.13
GPNMB-203ENST00000409458 NAALADL2Q58DX5 795 aa15.86■□□□□ 0.13
GPNMB-203ENST00000409458 ISM2Q6H9L7 571 aa15.86■□□□□ 0.13
GPNMB-203ENST00000409458 SLC30A10Q6XR72 485 aa15.86■□□□□ 0.13
GPNMB-203ENST00000409458 LUZP1Q86V48 1076 aa15.86■□□□□ 0.13
GPNMB-203ENST00000409458 RASSF8Q8NHQ8 419 aa15.86■□□□□ 0.13
GPNMB-203ENST00000409458 CYP2W1Q8TAV3 490 aa15.86■□□□□ 0.13
GPNMB-203ENST00000409458 MTRQ99707 1265 aa15.86■□□□□ 0.13
GPNMB-203ENST00000409458 RNF146Q9NTX7 359 aa15.86■□□□□ 0.13
GPNMB-203ENST00000409458 LRWD1Q9UFC0 647 aa15.86■□□□□ 0.13
GPNMB-203ENST00000409458 IGLV3-22A0A075B6J6 115 aa15.86■□□□□ 0.13
GPNMB-203ENST00000409458 MARCH6O60337 910 aa15.86■□□□□ 0.13
GPNMB-203ENST00000409458 PLCG1P19174 1290 aa15.86■□□□□ 0.13
GPNMB-203ENST00000409458 CASP1P29466 404 aa15.86■□□□□ 0.13
GPNMB-203ENST00000409458 ZNF76P36508 570 aa15.86■□□□□ 0.13
GPNMB-203ENST00000409458 ZNF165P49910 485 aa15.86■□□□□ 0.13
GPNMB-203ENST00000409458 ZRSR1Q15695 479 aaKnown RBP15.86■□□□□ 0.13
GPNMB-203ENST00000409458 UVSSAQ2YD98 709 aa15.86■□□□□ 0.13
GPNMB-203ENST00000409458 NT5DC1Q5TFE4 455 aa15.86■□□□□ 0.13
GPNMB-203ENST00000409458 RRAGBQ5VZM2 374 aa15.86■□□□□ 0.13
GPNMB-203ENST00000409458 SYTL5Q8TDW5 730 aaPredicted RBP15.86■□□□□ 0.13
GPNMB-203ENST00000409458 STAMQ92783 540 aa15.86■□□□□ 0.13
GPNMB-203ENST00000409458 PLIN2Q99541 437 aa15.86■□□□□ 0.13
GPNMB-203ENST00000409458 RAB34Q9BZG1 259 aa15.86■□□□□ 0.13
GPNMB-203ENST00000409458 HOXC10Q9NYD6 342 aa15.86■□□□□ 0.13
GPNMB-203ENST00000409458 CCDC39Q9UFE4 941 aa15.86■□□□□ 0.13
GPNMB-203ENST00000409458 MAN1B1Q9UKM7 699 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms