RNA–Protein interactions for RNA: ENST00000409285.6

VSX1-203, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best)

Gene VSX1, Length 1,486 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-203ENST00000409285 NONOQ15233 471 aaKnown RBP eCLIP23.39■■□□□ 1.34
VSX1-203ENST00000409285 MORN1Q5T089 497 aa23.39■■□□□ 1.34
VSX1-203ENST00000409285 JAKMIP3Q5VZ66 844 aa23.39■■□□□ 1.34
VSX1-203ENST00000409285 SOCS4Q8WXH5 440 aa23.39■■□□□ 1.34
VSX1-203ENST00000409285 EHMT1Q9H9B1 1298 aa23.39■■□□□ 1.34
VSX1-203ENST00000409285 ADORA2AP29274 412 aa23.38■■□□□ 1.33
VSX1-203ENST00000409285 CTGFP29279 349 aa23.38■■□□□ 1.33
VSX1-203ENST00000409285 FERMT3Q86UX7 667 aa23.38■■□□□ 1.33
VSX1-203ENST00000409285 DIS3Q9Y2L1 958 aaKnown RBP23.38■■□□□ 1.33
VSX1-203ENST00000409285 POTEB2H3BUK9 544 aa23.37■■□□□ 1.33
VSX1-203ENST00000409285 TNPO2O14787 897 aaKnown RBP23.37■■□□□ 1.33
VSX1-203ENST00000409285 HOXC6P09630 235 aa23.37■■□□□ 1.33
VSX1-203ENST00000409285 TRAPPC10P48553 1259 aa23.37■■□□□ 1.33
VSX1-203ENST00000409285 KIF22Q14807 665 aa23.37■■□□□ 1.33
VSX1-203ENST00000409285 EARS2Q5JPH6 523 aaKnown RBP23.37■■□□□ 1.33
VSX1-203ENST00000409285 PIK3AP1Q6ZUJ8 805 aa23.37■■□□□ 1.33
VSX1-203ENST00000409285 NSUN6Q8TEA1 469 aaKnown RBP23.37■■□□□ 1.33
VSX1-203ENST00000409285 USP6NLQ92738 828 aa23.37■■□□□ 1.33
VSX1-203ENST00000409285 PRDM10Q9NQV6 1147 aa23.37■■□□□ 1.33
VSX1-203ENST00000409285 ADD3Q9UEY8 706 aaKnown RBP23.37■■□□□ 1.33
VSX1-203ENST00000409285 ASTN1O14525 1302 aa23.36■■□□□ 1.33
VSX1-203ENST00000409285 GNRH1P01148 92 aa23.36■■□□□ 1.33
VSX1-203ENST00000409285 PSMC4P43686 418 aa23.36■■□□□ 1.33
VSX1-203ENST00000409285 ZNF467Q7Z7K2 595 aaPredicted RBP23.36■■□□□ 1.33
VSX1-203ENST00000409285 FCHSD1Q86WN1 690 aa23.36■■□□□ 1.33
VSX1-203ENST00000409285 TRIM47Q96LD4 638 aa23.36■■□□□ 1.33
VSX1-203ENST00000409285 RMDN3Q96TC7 470 aa23.36■■□□□ 1.33
VSX1-203ENST00000409285 PXMP2Q9NR77 195 aa23.36■■□□□ 1.33
VSX1-203ENST00000409285 CENPFP49454 3210 aa23.36■■□□□ 1.33
VSX1-203ENST00000409285 FKTNO75072 461 aa23.36■■□□□ 1.33
VSX1-203ENST00000409285 ZNF792Q3KQV3 632 aa23.36■■□□□ 1.33
VSX1-203ENST00000409285 RILPL1Q5EBL4 403 aa23.36■■□□□ 1.33
VSX1-203ENST00000409285 TBCKQ8TEA7 893 aa23.36■■□□□ 1.33
VSX1-203ENST00000409285 ERO1AQ96HE7 468 aa23.36■■□□□ 1.33
VSX1-203ENST00000409285 FGD4Q96M96 766 aa23.36■■□□□ 1.33
VSX1-203ENST00000409285 TAAR1Q96RJ0 339 aa23.36■■□□□ 1.33
VSX1-203ENST00000409285 IWS1Q96ST2 819 aa23.36■■□□□ 1.33
VSX1-203ENST00000409285 GJD2Q9UKL4 321 aa23.36■■□□□ 1.33
VSX1-203ENST00000409285 ATP6V1DQ9Y5K8 247 aa23.36■■□□□ 1.33
VSX1-203ENST00000409285 PGK2P07205 417 aa23.35■■□□□ 1.33
VSX1-203ENST00000409285 CYP3A4P08684 503 aa23.35■■□□□ 1.33
VSX1-203ENST00000409285 USP11P51784 963 aa23.35■■□□□ 1.33
VSX1-203ENST00000409285 CNTN2Q02246 1040 aa23.35■■□□□ 1.33
VSX1-203ENST00000409285 MAP2K5Q13163 448 aa23.35■■□□□ 1.33
VSX1-203ENST00000409285 MYSM1Q5VVJ2 828 aa23.35■■□□□ 1.33
VSX1-203ENST00000409285 XRRA1Q6P2D8 792 aa23.35■■□□□ 1.33
VSX1-203ENST00000409285 NUDT12Q9BQG2 462 aa23.35■■□□□ 1.33
VSX1-203ENST00000409285 PDCD2LQ9BRP1 358 aa23.35■■□□□ 1.33
VSX1-203ENST00000409285 ARHGAP39Q9C0H5 1083 aa23.35■■□□□ 1.33
VSX1-203ENST00000409285 SLC5A4Q9NY91 659 aa23.35■■□□□ 1.33
VSX1-203ENST00000409285 SOWAHBA6NEL2 793 aa23.34■■□□□ 1.33
VSX1-203ENST00000409285 FAM205CA6NFA0 338 aa23.34■■□□□ 1.33
VSX1-203ENST00000409285 COBLO75128 1261 aa23.34■■□□□ 1.33
VSX1-203ENST00000409285 EDNRBP24530 442 aa23.34■■□□□ 1.33
VSX1-203ENST00000409285 ALDH5A1P51649 535 aaPredicted RBP23.34■■□□□ 1.33
VSX1-203ENST00000409285 ARHGAP4P98171 946 aa23.34■■□□□ 1.33
VSX1-203ENST00000409285 PCNX4Q63HM2 1172 aa23.34■■□□□ 1.33
VSX1-203ENST00000409285 MOXD1Q6UVY6 613 aa23.34■■□□□ 1.33
VSX1-203ENST00000409285 NEK8Q86SG6 692 aa23.34■■□□□ 1.33
VSX1-203ENST00000409285 ZNF296Q8WUU4 475 aaPredicted RBP23.34■■□□□ 1.33
VSX1-203ENST00000409285 PGBD1Q96JS3 809 aa23.34■■□□□ 1.33
VSX1-203ENST00000409285 NOL7Q9UMY1 257 aaKnown RBP23.34■■□□□ 1.33
VSX1-203ENST00000409285 ARHGEF6Q15052 776 aa23.33■■□□□ 1.33
VSX1-203ENST00000409285 PGM5Q15124 567 aa23.33■■□□□ 1.33
VSX1-203ENST00000409285 INF2Q27J81 1249 aa23.33■■□□□ 1.33
VSX1-203ENST00000409285 ARHGEF16Q5VV41 709 aa23.33■■□□□ 1.33
VSX1-203ENST00000409285 MSL3Q8N5Y2 521 aaKnown RBP23.33■■□□□ 1.33
VSX1-203ENST00000409285 MORC4Q8TE76 937 aa23.33■■□□□ 1.33
VSX1-203ENST00000409285 PURBQ96QR8 312 aaKnown RBP23.33■■□□□ 1.33
VSX1-203ENST00000409285 MPHOSPH6Q99547 160 aaKnown RBP23.33■■□□□ 1.33
VSX1-203ENST00000409285 B4DLN1 442 aa23.32■■□□□ 1.32
VSX1-203ENST00000409285 XRCC5P13010 732 aaKnown RBP23.32■■□□□ 1.32
VSX1-203ENST00000409285 CIITAP33076 1130 aa23.32■■□□□ 1.32
VSX1-203ENST00000409285 RGS2P41220 211 aa23.32■■□□□ 1.32
VSX1-203ENST00000409285 TOB1P50616 345 aaPredicted RBP23.32■■□□□ 1.32
VSX1-203ENST00000409285 ORC2Q13416 577 aaPredicted RBP23.32■■□□□ 1.32
VSX1-203ENST00000409285 ATL3Q6DD88 541 aa23.32■■□□□ 1.32
VSX1-203ENST00000409285 MAMDC4Q6UXC1 1216 aa23.32■■□□□ 1.32
VSX1-203ENST00000409285 DPP9Q86TI2 863 aa23.32■■□□□ 1.32
VSX1-203ENST00000409285 NAP1L4Q99733 375 aaKnown RBP23.32■■□□□ 1.32
VSX1-203ENST00000409285 APBA2Q99767 749 aa23.32■■□□□ 1.32
VSX1-203ENST00000409285 EDIL3O43854 480 aa23.31■■□□□ 1.32
VSX1-203ENST00000409285 STAM2O75886 525 aa23.31■■□□□ 1.32
VSX1-203ENST00000409285 GCFC2P16383 781 aaKnown RBP23.31■■□□□ 1.32
VSX1-203ENST00000409285 EIF2AK2P19525 551 aaKnown RBP23.31■■□□□ 1.32
VSX1-203ENST00000409285 CAP1Q01518 475 aa23.31■■□□□ 1.32
VSX1-203ENST00000409285 PPP4R3AQ6IN85 833 aa23.31■■□□□ 1.32
VSX1-203ENST00000409285 VSIG10LQ86VR7 867 aa23.31■■□□□ 1.32
VSX1-203ENST00000409285 CD99L2Q8TCZ2 262 aa23.31■■□□□ 1.32
VSX1-203ENST00000409285 CYP3A7-CYP3A51PA0A087WV96 503 aa23.3■■□□□ 1.32
VSX1-203ENST00000409285 CYP3A7P24462 503 aa23.3■■□□□ 1.32
VSX1-203ENST00000409285 FOXD4L5Q5VV16 416 aaPredicted RBP23.3■■□□□ 1.32
VSX1-203ENST00000409285 FOXD4L4Q8WXT5 416 aaPredicted RBP23.3■■□□□ 1.32
VSX1-203ENST00000409285 MAML3Q96JK9 1138 aa23.3■■□□□ 1.32
VSX1-203ENST00000409285 MBOAT7Q96N66 472 aa23.3■■□□□ 1.32
VSX1-203ENST00000409285 WDR81Q562E7 1941 aa23.3■■□□□ 1.32
VSX1-203ENST00000409285 DOCK5Q9H7D0 1870 aa23.3■■□□□ 1.32
VSX1-203ENST00000409285 ASB14A6NK59 587 aa23.3■■□□□ 1.32
VSX1-203ENST00000409285 IGHA2P01877 340 aa23.3■■□□□ 1.32
VSX1-203ENST00000409285 NR3C2P08235 984 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms