RNA–Protein interactions for RNA: ENST00000409229.7

SLC3A1-202, Transcript of solute carrier family 3 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC3A1, Length 2,909 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A1-202ENST00000409229 SPA17Q15506 151 aa12.78□□□□□ -0.36
SLC3A1-202ENST00000409229 KLHL7Q8IXQ5 586 aa12.78□□□□□ -0.36
SLC3A1-202ENST00000409229 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.78□□□□□ -0.36
SLC3A1-202ENST00000409229 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.78□□□□□ -0.36
SLC3A1-202ENST00000409229 AFF2P51816 1311 aa12.78□□□□□ -0.36
SLC3A1-202ENST00000409229 ABLIM1O14639 778 aa12.78□□□□□ -0.36
SLC3A1-202ENST00000409229 SEMA3EO15041 775 aa12.78□□□□□ -0.36
SLC3A1-202ENST00000409229 FUT4P22083 530 aa12.78□□□□□ -0.36
SLC3A1-202ENST00000409229 GBP1P32455 592 aa12.78□□□□□ -0.36
SLC3A1-202ENST00000409229 SERPINB4P48594 390 aa12.78□□□□□ -0.36
SLC3A1-202ENST00000409229 DEUP1Q05D60 604 aa12.78□□□□□ -0.36
SLC3A1-202ENST00000409229 ITIH4Q14624 930 aa12.78□□□□□ -0.36
SLC3A1-202ENST00000409229 ERMARDQ5T6L9 678 aa12.78□□□□□ -0.36
SLC3A1-202ENST00000409229 CEP128Q6ZU80 1094 aa12.78□□□□□ -0.36
SLC3A1-202ENST00000409229 ZNF572Q7Z3I7 529 aaPredicted RBP12.78□□□□□ -0.36
SLC3A1-202ENST00000409229 FAM129AQ9BZQ8 928 aa12.78□□□□□ -0.36
SLC3A1-202ENST00000409229 AGPAT5Q9NUQ2 364 aa12.78□□□□□ -0.36
SLC3A1-202ENST00000409229 LIMA1Q9UHB6 759 aaKnown RBP12.78□□□□□ -0.36
SLC3A1-202ENST00000409229 XRN1Q8IZH2 1706 aaKnown RBP12.77□□□□□ -0.36
SLC3A1-202ENST00000409229 ZCCHC11Q5TAX3 1644 aaKnown RBP12.77□□□□□ -0.36
SLC3A1-202ENST00000409229 PPP1R3GB7ZBB8 358 aa12.77□□□□□ -0.36
SLC3A1-202ENST00000409229 H0Y3Z8 333 aa12.77□□□□□ -0.36
SLC3A1-202ENST00000409229 ACTN4O43707 911 aaKnown RBP12.77□□□□□ -0.36
SLC3A1-202ENST00000409229 USO1O60763 962 aaKnown RBP12.77□□□□□ -0.36
SLC3A1-202ENST00000409229 ZNF24P17028 368 aa12.77□□□□□ -0.36
SLC3A1-202ENST00000409229 IFNAR2P48551 515 aa12.77□□□□□ -0.36
SLC3A1-202ENST00000409229 UAP1Q16222 522 aaPredicted RBP12.77□□□□□ -0.36
SLC3A1-202ENST00000409229 CFAP221Q4G0U5 840 aa12.77□□□□□ -0.36
SLC3A1-202ENST00000409229 LRIG3Q6UXM1 1119 aa12.77□□□□□ -0.36
SLC3A1-202ENST00000409229 DDX42Q86XP3 938 aaKnown RBP eCLIP12.77□□□□□ -0.36
SLC3A1-202ENST00000409229 LINS1Q8NG48 757 aa12.77□□□□□ -0.36
SLC3A1-202ENST00000409229 PHKBQ93100 1093 aa12.77□□□□□ -0.36
SLC3A1-202ENST00000409229 DNAJC7Q99615 494 aa12.77□□□□□ -0.36
SLC3A1-202ENST00000409229 DMAP1Q9NPF5 467 aaPredicted RBP12.77□□□□□ -0.36
SLC3A1-202ENST00000409229 CWC25Q9NXE8 425 aaPredicted RBP12.77□□□□□ -0.36
SLC3A1-202ENST00000409229 SCOCQ9UIL1 159 aa12.77□□□□□ -0.36
SLC3A1-202ENST00000409229 USH1CQ9Y6N9 552 aa12.77□□□□□ -0.36
SLC3A1-202ENST00000409229 ARHGEF28Q8N1W1 1705 aaKnown RBP12.77□□□□□ -0.36
SLC3A1-202ENST00000409229 PDLIM1O00151 329 aa12.77□□□□□ -0.37
SLC3A1-202ENST00000409229 USP46P62068 366 aa12.77□□□□□ -0.37
SLC3A1-202ENST00000409229 TCP11X2Q5H9J9 407 aa12.77□□□□□ -0.37
SLC3A1-202ENST00000409229 RASIP1Q5U651 963 aa12.77□□□□□ -0.37
SLC3A1-202ENST00000409229 RRAGBQ5VZM2 374 aa12.77□□□□□ -0.37
SLC3A1-202ENST00000409229 OR52E8Q6IFG1 317 aa12.77□□□□□ -0.37
SLC3A1-202ENST00000409229 CCNJLQ8IV13 435 aa12.77□□□□□ -0.37
SLC3A1-202ENST00000409229 RNF168Q8IYW5 571 aaPredicted RBP12.77□□□□□ -0.37
SLC3A1-202ENST00000409229 PCMTD1Q96MG8 357 aaPredicted RBP12.77□□□□□ -0.37
SLC3A1-202ENST00000409229 DDX23Q9BUQ8 820 aaKnown RBP12.77□□□□□ -0.37
SLC3A1-202ENST00000409229 TRIM7Q9C029 511 aa12.77□□□□□ -0.37
SLC3A1-202ENST00000409229 MTFR1LQ9H019 292 aa12.77□□□□□ -0.37
SLC3A1-202ENST00000409229 PNMA2Q9UL42 364 aa12.77□□□□□ -0.37
SLC3A1-202ENST00000409229 HPS5Q9UPZ3 1129 aa12.77□□□□□ -0.37
SLC3A1-202ENST00000409229 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.76□□□□□ -0.37
SLC3A1-202ENST00000409229 H0YGN5 161 aa12.76□□□□□ -0.37
SLC3A1-202ENST00000409229 CHN1P15882 459 aa12.76□□□□□ -0.37
SLC3A1-202ENST00000409229 COPS2P61201 443 aa12.76□□□□□ -0.37
SLC3A1-202ENST00000409229 RNASELQ05823 741 aaKnown RBP12.76□□□□□ -0.37
SLC3A1-202ENST00000409229 KANK3Q6NY19 840 aa12.76□□□□□ -0.37
SLC3A1-202ENST00000409229 APBB1IPQ7Z5R6 666 aaPredicted RBP12.76□□□□□ -0.37
SLC3A1-202ENST00000409229 RNF10Q8N5U6 811 aaKnown RBP12.76□□□□□ -0.37
SLC3A1-202ENST00000409229 RETREG2Q8NC44 543 aa12.76□□□□□ -0.37
SLC3A1-202ENST00000409229 IFT74Q96LB3 600 aa12.76□□□□□ -0.37
SLC3A1-202ENST00000409229 ZNF317Q96PQ6 595 aaPredicted RBP12.76□□□□□ -0.37
SLC3A1-202ENST00000409229 PURBQ96QR8 312 aaKnown RBP12.76□□□□□ -0.37
SLC3A1-202ENST00000409229 VPS54Q9P1Q0 977 aa12.76□□□□□ -0.37
SLC3A1-202ENST00000409229 PNMA3Q9UL41 463 aa12.76□□□□□ -0.37
SLC3A1-202ENST00000409229 NFS1Q9Y697 457 aa12.76□□□□□ -0.37
SLC3A1-202ENST00000409229 WDR17Q8IZU2 1322 aa12.76□□□□□ -0.37
SLC3A1-202ENST00000409229 ADGRB3O60242 1522 aa12.76□□□□□ -0.37
SLC3A1-202ENST00000409229 CETN3O15182 167 aa12.76□□□□□ -0.37
SLC3A1-202ENST00000409229 TRIM21P19474 475 aaKnown RBP12.76□□□□□ -0.37
SLC3A1-202ENST00000409229 PEX5P50542 639 aa12.76□□□□□ -0.37
SLC3A1-202ENST00000409229 TRIM29Q14134 588 aa12.76□□□□□ -0.37
SLC3A1-202ENST00000409229 TSNAXIP1Q2TAA8 658 aa12.76□□□□□ -0.37
SLC3A1-202ENST00000409229 MIGA2Q7L4E1 593 aa12.76□□□□□ -0.37
SLC3A1-202ENST00000409229 PIGWQ7Z7B1 504 aa12.76□□□□□ -0.37
SLC3A1-202ENST00000409229 CCDC42Q96M95 316 aa12.76□□□□□ -0.37
SLC3A1-202ENST00000409229 ANKRD27Q96NW4 1050 aa12.76□□□□□ -0.37
SLC3A1-202ENST00000409229 GBP5Q96PP8 586 aa12.76□□□□□ -0.37
SLC3A1-202ENST00000409229 IFIH1Q9BYX4 1025 aaKnown RBP12.76□□□□□ -0.37
SLC3A1-202ENST00000409229 LRRC4CQ9HCJ2 640 aa12.76□□□□□ -0.37
SLC3A1-202ENST00000409229 ANKARQ7Z5J8 1434 aa12.76□□□□□ -0.37
SLC3A1-202ENST00000409229 KIF20BQ96Q89 1820 aa12.76□□□□□ -0.37
SLC3A1-202ENST00000409229 PSMC4P43686 418 aa12.75□□□□□ -0.37
SLC3A1-202ENST00000409229 SAFBQ15424 915 aaKnown RBP eCLIP12.75□□□□□ -0.37
SLC3A1-202ENST00000409229 MUM1Q2TAK8 710 aa12.75□□□□□ -0.37
SLC3A1-202ENST00000409229 BICDL1Q6ZP65 573 aa12.75□□□□□ -0.37
SLC3A1-202ENST00000409229 DNAJC9Q8WXX5 260 aa12.75□□□□□ -0.37
SLC3A1-202ENST00000409229 RAB17Q9H0T7 212 aa12.75□□□□□ -0.37
SLC3A1-202ENST00000409229 FBXL5Q9UKA1 691 aa12.75□□□□□ -0.37
SLC3A1-202ENST00000409229 NUTM2BA6NNL0 878 aaPredicted RBP12.75□□□□□ -0.37
SLC3A1-202ENST00000409229 NUTM2EB1AL46 878 aaPredicted RBP12.75□□□□□ -0.37
SLC3A1-202ENST00000409229 ASAP2O43150 1006 aa12.75□□□□□ -0.37
SLC3A1-202ENST00000409229 HNRNPRO43390 633 aaKnown RBP12.75□□□□□ -0.37
SLC3A1-202ENST00000409229 PRC1O43663 620 aa12.75□□□□□ -0.37
SLC3A1-202ENST00000409229 PLEKP08567 350 aaPredicted RBP12.75□□□□□ -0.37
SLC3A1-202ENST00000409229 GNAZP19086 355 aa12.75□□□□□ -0.37
SLC3A1-202ENST00000409229 GJA8P48165 433 aa12.75□□□□□ -0.37
SLC3A1-202ENST00000409229 SPAG1Q07617 926 aa12.75□□□□□ -0.37
SLC3A1-202ENST00000409229 TCERG1LQ5VWI1 586 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms