RNA–Protein interactions for RNA: ENST00000408509.1

MIR548F3-201, Transcript of microRNA 548f-3, humanhuman

BASIC

Gene MIR548F3, Length 87 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR548F3-201ENST00000408509 SLC25A43Q8WUT9 341 aaPredicted RBP-0.39□□□□□ -2.47
MIR548F3-201ENST00000408509 DDX17Q92841 729 aaKnown RBP-0.39□□□□□ -2.47
MIR548F3-201ENST00000408509 NXPE3Q969Y0 559 aa-0.39□□□□□ -2.47
MIR548F3-201ENST00000408509 HMCESQ96FZ2 354 aa-0.39□□□□□ -2.47
MIR548F3-201ENST00000408509 THOC3Q96J01 351 aaKnown RBP-0.39□□□□□ -2.47
MIR548F3-201ENST00000408509 EAF1Q96JC9 268 aaPredicted RBP-0.39□□□□□ -2.47
MIR548F3-201ENST00000408509 LYZL4Q96KX0 146 aa-0.39□□□□□ -2.47
MIR548F3-201ENST00000408509 SPRR2GQ9BYE4 73 aa-0.39□□□□□ -2.47
MIR548F3-201ENST00000408509 CCDC86Q9H6F5 360 aaKnown RBP-0.39□□□□□ -2.47
MIR548F3-201ENST00000408509 UTP3Q9NQZ2 479 aaKnown RBP eCLIP-0.39□□□□□ -2.47
MIR548F3-201ENST00000408509 ZNF862O60290 1169 aa-0.4□□□□□ -2.47
MIR548F3-201ENST00000408509 FAM20BO75063 409 aa-0.4□□□□□ -2.47
MIR548F3-201ENST00000408509 CLASP2O75122 1294 aaKnown RBP-0.4□□□□□ -2.47
MIR548F3-201ENST00000408509 CYP2C8P10632 490 aa-0.4□□□□□ -2.47
MIR548F3-201ENST00000408509 NR4A2P43354 598 aa-0.4□□□□□ -2.47
MIR548F3-201ENST00000408509 JAM2P57087 298 aa-0.4□□□□□ -2.47
MIR548F3-201ENST00000408509 PSME1Q06323 249 aa-0.4□□□□□ -2.47
MIR548F3-201ENST00000408509 CACNB2Q08289 660 aaPredicted RBP-0.4□□□□□ -2.47
MIR548F3-201ENST00000408509 FAAP100Q0VG06 881 aa-0.4□□□□□ -2.47
MIR548F3-201ENST00000408509 DGKZQ13574 1117 aa-0.4□□□□□ -2.47
MIR548F3-201ENST00000408509 FKBP15Q5T1M5 1219 aa-0.4□□□□□ -2.47
MIR548F3-201ENST00000408509 Q6YL49 198 aa-0.4□□□□□ -2.47
MIR548F3-201ENST00000408509 BRAPQ7Z569 592 aa-0.4□□□□□ -2.47
MIR548F3-201ENST00000408509 ADHFE1Q8IWW8 467 aa-0.4□□□□□ -2.47
MIR548F3-201ENST00000408509 DENND1AQ8TEH3 1009 aa-0.4□□□□□ -2.47
MIR548F3-201ENST00000408509 LENG9Q96B70 501 aa-0.4□□□□□ -2.47
MIR548F3-201ENST00000408509 YTHDC1Q96MU7 727 aaKnown RBP-0.4□□□□□ -2.47
MIR548F3-201ENST00000408509 DKK2Q9UBU2 259 aa-0.4□□□□□ -2.47
MIR548F3-201ENST00000408509 PCDHGC5Q9Y5F6 944 aa-0.4□□□□□ -2.47
MIR548F3-201ENST00000408509 SLC30A1Q9Y6M5 507 aa-0.4□□□□□ -2.47
MIR548F3-201ENST00000408509 KIF26BQ2KJY2 2108 aa-0.4□□□□□ -2.47
MIR548F3-201ENST00000408509 PRRC2AP48634 2157 aaKnown RBP-0.4□□□□□ -2.47
MIR548F3-201ENST00000408509 HIVEP2P31629 2446 aa-0.4□□□□□ -2.47
MIR548F3-201ENST00000408509 A0A1W2PP55 124 aa-0.41□□□□□ -2.48
MIR548F3-201ENST00000408509 WTIPA6NIX2 430 aaPredicted RBP-0.41□□□□□ -2.48
MIR548F3-201ENST00000408509 UBAP1LF5GYI3 381 aa-0.41□□□□□ -2.48
MIR548F3-201ENST00000408509 PPEF2O14830 753 aa-0.41□□□□□ -2.48
MIR548F3-201ENST00000408509 DRD4P21917 467 aa-0.41□□□□□ -2.48
MIR548F3-201ENST00000408509 PCDH1Q08174 1060 aa-0.41□□□□□ -2.48
MIR548F3-201ENST00000408509 NFATC3Q12968 1075 aa-0.41□□□□□ -2.48
MIR548F3-201ENST00000408509 NR1H3Q13133 447 aa-0.41□□□□□ -2.48
MIR548F3-201ENST00000408509 ZNF423Q2M1K9 1284 aa-0.41□□□□□ -2.48
MIR548F3-201ENST00000408509 TUSC1Q2TAM9 212 aa-0.41□□□□□ -2.48
MIR548F3-201ENST00000408509 ZNF672Q499Z4 452 aaPredicted RBP-0.41□□□□□ -2.48
MIR548F3-201ENST00000408509 ZNF772Q68DY9 489 aaPredicted RBP-0.41□□□□□ -2.48
MIR548F3-201ENST00000408509 DMKNQ6E0U4 476 aaPredicted RBP-0.41□□□□□ -2.48
MIR548F3-201ENST00000408509 PAQR3Q6TCH7 311 aa-0.41□□□□□ -2.48
MIR548F3-201ENST00000408509 ZNF788Q6ZQV5 615 aa-0.41□□□□□ -2.48
MIR548F3-201ENST00000408509 RHOUQ7L0Q8 258 aa-0.41□□□□□ -2.48
MIR548F3-201ENST00000408509 THEMISQ8N1K5 641 aaPredicted RBP-0.41□□□□□ -2.48
MIR548F3-201ENST00000408509 CHMP7Q8WUX9 453 aaPredicted RBP-0.41□□□□□ -2.48
MIR548F3-201ENST00000408509 NEIL1Q96FI4 390 aaPredicted RBP-0.41□□□□□ -2.48
MIR548F3-201ENST00000408509 MAML3Q96JK9 1138 aa-0.41□□□□□ -2.48
MIR548F3-201ENST00000408509 MKRN2Q9H000 416 aaKnown RBP-0.41□□□□□ -2.48
MIR548F3-201ENST00000408509 BHMT2Q9H2M3 363 aa-0.41□□□□□ -2.48
MIR548F3-201ENST00000408509 SLC7A10Q9NS82 523 aa-0.41□□□□□ -2.48
MIR548F3-201ENST00000408509 NOD1Q9Y239 953 aa-0.41□□□□□ -2.48
MIR548F3-201ENST00000408509 FBN1P35555 2871 aaKnown RBP-0.41□□□□□ -2.48
MIR548F3-201ENST00000408509 A0A1B0GU03 582 aa-0.42□□□□□ -2.48
MIR548F3-201ENST00000408509 KRTAP23-1A1A580 65 aa-0.42□□□□□ -2.48
MIR548F3-201ENST00000408509 C4orf47A7E2U8 309 aa-0.42□□□□□ -2.48
MIR548F3-201ENST00000408509 C1QL1O75973 258 aa-0.42□□□□□ -2.48
MIR548F3-201ENST00000408509 CYBBP04839 570 aa-0.42□□□□□ -2.48
MIR548F3-201ENST00000408509 DBHP09172 617 aa-0.42□□□□□ -2.48
MIR548F3-201ENST00000408509 PRR35P0CG20 571 aa-0.42□□□□□ -2.48
MIR548F3-201ENST00000408509 ZNF28P17035 718 aa-0.42□□□□□ -2.48
MIR548F3-201ENST00000408509 VEGFCP49767 419 aa-0.42□□□□□ -2.48
MIR548F3-201ENST00000408509 HTR6P50406 440 aa-0.42□□□□□ -2.48
MIR548F3-201ENST00000408509 KHDRBS2Q5VWX1 349 aaKnown RBP-0.42□□□□□ -2.48
MIR548F3-201ENST00000408509 CDC37L1Q7L3B6 337 aa-0.42□□□□□ -2.48
MIR548F3-201ENST00000408509 KLHL36Q8N4N3 616 aa-0.42□□□□□ -2.48
MIR548F3-201ENST00000408509 TTLL6Q8N841 843 aa-0.42□□□□□ -2.48
MIR548F3-201ENST00000408509 ARHGEF1Q92888 912 aaKnown RBP-0.42□□□□□ -2.48
MIR548F3-201ENST00000408509 CCDC102AQ96A19 550 aa-0.42□□□□□ -2.48
MIR548F3-201ENST00000408509 UHRF2Q96PU4 802 aa-0.42□□□□□ -2.48
MIR548F3-201ENST00000408509 DUSP26Q9BV47 211 aa-0.42□□□□□ -2.48
MIR548F3-201ENST00000408509 PLA2G12AQ9BZM1 189 aa-0.42□□□□□ -2.48
MIR548F3-201ENST00000408509 ZNF408Q9H9D4 720 aa-0.42□□□□□ -2.48
MIR548F3-201ENST00000408509 MLXIPLQ9NP71 852 aa-0.42□□□□□ -2.48
MIR548F3-201ENST00000408509 ADAMTS1Q9UHI8 967 aa-0.42□□□□□ -2.48
MIR548F3-201ENST00000408509 SNED1Q8TER0 1413 aa-0.42□□□□□ -2.48
MIR548F3-201ENST00000408509 SEC24DO94855 1032 aaPredicted RBP-0.43□□□□□ -2.48
MIR548F3-201ENST00000408509 PRB2P02812 416 aaPredicted RBP-0.43□□□□□ -2.48
MIR548F3-201ENST00000408509 DNAH10OSP0CZ25 163 aa-0.43□□□□□ -2.48
MIR548F3-201ENST00000408509 IL13P35225 146 aa-0.43□□□□□ -2.48
MIR548F3-201ENST00000408509 MSX2P35548 267 aaPredicted RBP-0.43□□□□□ -2.48
MIR548F3-201ENST00000408509 HLCSP50747 726 aa-0.43□□□□□ -2.48
MIR548F3-201ENST00000408509 HHEXQ03014 270 aa-0.43□□□□□ -2.48
MIR548F3-201ENST00000408509 TAP1Q03518 808 aa-0.43□□□□□ -2.48
MIR548F3-201ENST00000408509 CFHR1Q03591 330 aa-0.43□□□□□ -2.48
MIR548F3-201ENST00000408509 MAP3K12Q12852 859 aa-0.43□□□□□ -2.48
MIR548F3-201ENST00000408509 EIF4EBP2Q13542 120 aaPredicted RBP-0.43□□□□□ -2.48
MIR548F3-201ENST00000408509 LAMB3Q13751 1172 aa-0.43□□□□□ -2.48
MIR548F3-201ENST00000408509 CHRNA2Q15822 529 aa-0.43□□□□□ -2.48
MIR548F3-201ENST00000408509 KIF4BQ2VIQ3 1234 aa-0.43□□□□□ -2.48
MIR548F3-201ENST00000408509 SLFNL1Q499Z3 407 aa-0.43□□□□□ -2.48
MIR548F3-201ENST00000408509 ZNF746Q6NUN9 644 aaPredicted RBP-0.43□□□□□ -2.48
MIR548F3-201ENST00000408509 FAM198BQ6UWH4 519 aa-0.43□□□□□ -2.48
MIR548F3-201ENST00000408509 RALYLQ86SE5 291 aaKnown RBP-0.43□□□□□ -2.48
MIR548F3-201ENST00000408509 VGLL2Q8N8G2 317 aa-0.43□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms