RNA–Protein interactions for RNA: ENST00000408061.1

SNORD88C-201, Transcript of small nucleolar RNA, C/D box 88C, humanhuman

BASIC

Gene SNORD88C, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88C-201ENST00000408061 FBXO28Q9NVF7 368 aa11.65□□□□□ -0.54
SNORD88C-201ENST00000408061 STK17AQ9UEE5 414 aa11.65□□□□□ -0.54
SNORD88C-201ENST00000408061 SERTAD1Q9UHV2 236 aa11.65□□□□□ -0.54
SNORD88C-201ENST00000408061 PCDHA12Q9UN75 941 aa11.65□□□□□ -0.54
SNORD88C-201ENST00000408061 KCNH4Q9UQ05 1017 aa11.65□□□□□ -0.54
SNORD88C-201ENST00000408061 POTECB2RU33 542 aa11.64□□□□□ -0.55
SNORD88C-201ENST00000408061 ADM5C9JUS6 153 aa11.64□□□□□ -0.55
SNORD88C-201ENST00000408061 EDIL3O43854 480 aa11.64□□□□□ -0.55
SNORD88C-201ENST00000408061 CFBP00751 764 aa11.64□□□□□ -0.55
SNORD88C-201ENST00000408061 BCRP11274 1271 aa11.64□□□□□ -0.55
SNORD88C-201ENST00000408061 COPB2P35606 906 aa11.64□□□□□ -0.55
SNORD88C-201ENST00000408061 ZNF76P36508 570 aa11.64□□□□□ -0.55
SNORD88C-201ENST00000408061 SARSP49591 514 aaKnown RBP11.64□□□□□ -0.55
SNORD88C-201ENST00000408061 HMGCS2P54868 508 aa11.64□□□□□ -0.55
SNORD88C-201ENST00000408061 TPM4P67936 248 aa11.64□□□□□ -0.55
SNORD88C-201ENST00000408061 SETQ01105 290 aaPredicted RBP11.64□□□□□ -0.55
SNORD88C-201ENST00000408061 E2F4Q16254 413 aa11.64□□□□□ -0.55
SNORD88C-201ENST00000408061 ANO6Q4KMQ2 910 aa11.64□□□□□ -0.55
SNORD88C-201ENST00000408061 LDLRAD1Q5T700 205 aa11.64□□□□□ -0.55
SNORD88C-201ENST00000408061 KRT79Q5XKE5 535 aa11.64□□□□□ -0.55
SNORD88C-201ENST00000408061 LBX2Q6XYB7 198 aa11.64□□□□□ -0.55
SNORD88C-201ENST00000408061 CABP7Q86V35 215 aa11.64□□□□□ -0.55
SNORD88C-201ENST00000408061 MLKLQ8NB16 471 aa11.64□□□□□ -0.55
SNORD88C-201ENST00000408061 SMARCE1Q969G3 411 aa11.64□□□□□ -0.55
SNORD88C-201ENST00000408061 NT5C3AQ9H0P0 336 aa11.64□□□□□ -0.55
SNORD88C-201ENST00000408061 KCNMB3Q9NPA1 279 aa11.64□□□□□ -0.55
SNORD88C-201ENST00000408061 DISC1Q9NRI5 854 aa11.64□□□□□ -0.55
SNORD88C-201ENST00000408061 RMND1Q9NWS8 449 aa11.64□□□□□ -0.55
SNORD88C-201ENST00000408061 LRWD1Q9UFC0 647 aa11.64□□□□□ -0.55
SNORD88C-201ENST00000408061 KDM3AQ9Y4C1 1321 aa11.63□□□□□ -0.55
SNORD88C-201ENST00000408061 PTPRFP10586 1907 aa11.63□□□□□ -0.55
SNORD88C-201ENST00000408061 RLFQ13129 1914 aa11.63□□□□□ -0.55
SNORD88C-201ENST00000408061 A0A0G2JLL6 359 aaPredicted RBP11.63□□□□□ -0.55
SNORD88C-201ENST00000408061 GOLGA6L19H0YKK7 550 aa11.63□□□□□ -0.55
SNORD88C-201ENST00000408061 GTPBP6O43824 516 aaPredicted RBP11.63□□□□□ -0.55
SNORD88C-201ENST00000408061 TDP2O95551 362 aa11.63□□□□□ -0.55
SNORD88C-201ENST00000408061 MUTP22033 750 aa11.63□□□□□ -0.55
SNORD88C-201ENST00000408061 PPP1R2P41236 205 aa11.63□□□□□ -0.55
SNORD88C-201ENST00000408061 STAT6P42226 847 aa11.63□□□□□ -0.55
SNORD88C-201ENST00000408061 TXKP42681 527 aa11.63□□□□□ -0.55
SNORD88C-201ENST00000408061 SPECC1Q5M775 1068 aa11.63□□□□□ -0.55
SNORD88C-201ENST00000408061 USP49Q70CQ1 688 aa11.63□□□□□ -0.55
SNORD88C-201ENST00000408061 PRRT2Q7Z6L0 340 aaPredicted RBP11.63□□□□□ -0.55
SNORD88C-201ENST00000408061 CCDC84Q86UT8 332 aaPredicted RBP11.63□□□□□ -0.55
SNORD88C-201ENST00000408061 POTEDQ86YR6 584 aa11.63□□□□□ -0.55
SNORD88C-201ENST00000408061 CHST13Q8NET6 341 aa11.63□□□□□ -0.55
SNORD88C-201ENST00000408061 ERMNQ8TAM6 284 aa11.63□□□□□ -0.55
SNORD88C-201ENST00000408061 GTF3C2Q8WUA4 911 aaPredicted RBP11.63□□□□□ -0.55
SNORD88C-201ENST00000408061 CLEC4DQ8WXI8 215 aa11.63□□□□□ -0.55
SNORD88C-201ENST00000408061 CCDC47Q96A33 483 aaKnown RBP11.63□□□□□ -0.55
SNORD88C-201ENST00000408061 DHX58Q96C10 678 aa11.63□□□□□ -0.55
SNORD88C-201ENST00000408061 PAGE5Q96GU1 130 aa11.63□□□□□ -0.55
SNORD88C-201ENST00000408061 PPP1R9BQ96SB3 815 aa11.63□□□□□ -0.55
SNORD88C-201ENST00000408061 TEX13BQ9BXU2 312 aa11.63□□□□□ -0.55
SNORD88C-201ENST00000408061 TTC12Q9H892 705 aaPredicted RBP11.63□□□□□ -0.55
SNORD88C-201ENST00000408061 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.63□□□□□ -0.55
SNORD88C-201ENST00000408061 FBXO40Q9UH90 709 aa11.63□□□□□ -0.55
SNORD88C-201ENST00000408061 PCDHA5Q9Y5H7 936 aa11.63□□□□□ -0.55
SNORD88C-201ENST00000408061 BECN2A8MW95 431 aa11.62□□□□□ -0.55
SNORD88C-201ENST00000408061 IRF6O14896 467 aa11.62□□□□□ -0.55
SNORD88C-201ENST00000408061 IKBKBO14920 756 aa11.62□□□□□ -0.55
SNORD88C-201ENST00000408061 MAFGO15525 162 aa11.62□□□□□ -0.55
SNORD88C-201ENST00000408061 STAM2O75886 525 aa11.62□□□□□ -0.55
SNORD88C-201ENST00000408061 TECP42680 631 aa11.62□□□□□ -0.55
SNORD88C-201ENST00000408061 SNAP25P60880 206 aa11.62□□□□□ -0.55
SNORD88C-201ENST00000408061 TTLL12Q14166 644 aaPredicted RBP11.62□□□□□ -0.55
SNORD88C-201ENST00000408061 EAPPQ56P03 285 aaPredicted RBP11.62□□□□□ -0.55
SNORD88C-201ENST00000408061 HYIQ5T013 277 aa11.62□□□□□ -0.55
SNORD88C-201ENST00000408061 PDXDC2PQ6P474 469 aa11.62□□□□□ -0.55
SNORD88C-201ENST00000408061 PDILTQ8N807 584 aa11.62□□□□□ -0.55
SNORD88C-201ENST00000408061 REPS2Q8NFH8 660 aa11.62□□□□□ -0.55
SNORD88C-201ENST00000408061 RASSF8Q8NHQ8 419 aa11.62□□□□□ -0.55
SNORD88C-201ENST00000408061 HAS1Q92839 578 aa11.62□□□□□ -0.55
SNORD88C-201ENST00000408061 CDK5RAP3Q96JB5 506 aa11.62□□□□□ -0.55
SNORD88C-201ENST00000408061 AGBL1Q96MI9 1066 aa11.62□□□□□ -0.55
SNORD88C-201ENST00000408061 TRERF1Q96PN7 1200 aa11.62□□□□□ -0.55
SNORD88C-201ENST00000408061 KBTBD4Q9NVX7 518 aa11.62□□□□□ -0.55
SNORD88C-201ENST00000408061 CLEC11AQ9Y240 323 aa11.62□□□□□ -0.55
SNORD88C-201ENST00000408061 SMCHD1A6NHR9 2005 aa11.62□□□□□ -0.55
SNORD88C-201ENST00000408061 LOC285556D6RIA3 1793 aa11.62□□□□□ -0.55
SNORD88C-201ENST00000408061 RBBP6Q7Z6E9 1792 aaKnown RBP11.62□□□□□ -0.55
SNORD88C-201ENST00000408061 FRMPD4Q14CM0 1322 aa11.61□□□□□ -0.55
SNORD88C-201ENST00000408061 RPTORQ8N122 1335 aa11.61□□□□□ -0.55
SNORD88C-201ENST00000408061 MEIS1O00470 390 aa11.61□□□□□ -0.55
SNORD88C-201ENST00000408061 SLC37A4O43826 429 aa11.61□□□□□ -0.55
SNORD88C-201ENST00000408061 ALAS1P13196 640 aa11.61□□□□□ -0.55
SNORD88C-201ENST00000408061 ERCC5P28715 1186 aaPredicted RBP11.61□□□□□ -0.55
SNORD88C-201ENST00000408061 DPYDQ12882 1025 aa11.61□□□□□ -0.55
SNORD88C-201ENST00000408061 PNOCQ13519 176 aa11.61□□□□□ -0.55
SNORD88C-201ENST00000408061 MORC3Q14149 939 aa11.61□□□□□ -0.55
SNORD88C-201ENST00000408061 KCNB1Q14721 858 aa11.61□□□□□ -0.55
SNORD88C-201ENST00000408061 IQCB1Q15051 598 aa11.61□□□□□ -0.55
SNORD88C-201ENST00000408061 CEP55Q53EZ4 464 aa11.61□□□□□ -0.55
SNORD88C-201ENST00000408061 PCNX4Q63HM2 1172 aa11.61□□□□□ -0.55
SNORD88C-201ENST00000408061 HAUS3Q68CZ6 603 aa11.61□□□□□ -0.55
SNORD88C-201ENST00000408061 CNNM4Q6P4Q7 775 aa11.61□□□□□ -0.55
SNORD88C-201ENST00000408061 FCHSD1Q86WN1 690 aa11.61□□□□□ -0.55
SNORD88C-201ENST00000408061 CPXCR1Q8N123 301 aa11.61□□□□□ -0.55
SNORD88C-201ENST00000408061 ETNPPLQ8TBG4 499 aa11.61□□□□□ -0.55
SNORD88C-201ENST00000408061 ATG4CQ96DT6 458 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms